>CFF609 (CFF609Q) /CSM/CF/CFF6-A/CFF609Q.Seq.d/
ATTGTTAAAATAAGAGTAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTGGTA
TTGATTTAGGTACAACATATTCATGTGTTGGTGTTTGGCAAAATGATCGTGTTGAAATTA
TTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAGAAC
GTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTATTTG
ATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGAAAC
ATTGGCCATTCAAAGTTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAATTCA
AAGGTGAAACTAAAGTTTTCTCACCAGAAGAAATCTCTTCAATGGTACTCTTAAAAATGA
AAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGTAATTACCGTTCCAG
CTTATTTCAATGATAGTCAACGTCAAGCAACCAAAGATGCTGGTACAATTTCAAAATTAA
ATGTTCAACGTATTATTAATGAACCAACTGCTGCTGCTATTGCTTATGGTTTAGAAAAGA
AAGGTTCTGGTGAAAAGAATATTTTAATTTTCGATTTAGXXXXXXXXXXTTATTCCAAGA
AATACANCAATTCCCATGTAAGAAAACTCAAACCTTCTCTACATACTCTGATAATCAACC
AGGTGTATTAATTCAAGTTTATGAAGGTGAACGTGCTATGACCAAAGATAATAATTTATT
GGGTAAATTTGAACTTTCTGGTATTCCACCAGCACCAAGAGGTGTACCACAAGTTGAAGT
TACATTTGATGTTGATGCAAATGGTATCTTAAATGTATCAGCTGAAGATAAATCAACTGG
TAACAAACAAAAGATTACAATTACCAATGATAAAGGTCGTCTTTCAAAAGAAGAAATTGA
AAAAATGGTTGCTGATGCAGAGAAATTCAAACAACAAGATGAACAACAAAAAGATCGTGT
TGAATCAAAGAATAAATTGGAAAATTATGCATTCACTGTTAAAAATTCAATTAAAGATGA
AAAAGTTGCAGCCAAAATTTCAGATTCAGATAAATCAACTATTGAATCTGAAACTGAAAG
TGTACTCAAATGGTTAGAATCAAATCAAACCGCAGAAAAGGATGAATATGAAGATAAGAT
GAAAGCCTTAGAAGCAGTTGTCAATCCAATCATGAGTAAACTCTATCAAGAAGGAGGTAT
GCCACAAGGTGGTGGTATGCCAGGTGGTATGTCAAATGATTCACCAAAGAGTTCAAACAA
CAAAGTAGACGAATTAGATTGACGGAATTTTTCAGAGGAAAACATCTCTATCAAATAGAT
TTCTTAAAAAATAATAAGTTAGTAAAATCAATAAAGCTTCTCATATA

c*nksky*iiky*KMSSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTER
LIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFK
GETKVFSPEEISSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGTISKLN
VQRIINEPTAAAIAYGLEKKGSGEKNILIFDL---

---LFQEIXQFPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPR
GVPQVEVTFDVDANGILNVSAEDKSTGNKQKITITNDKGRLSKEEIEKMVADAEKFKQQD
EQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEK
DEYEDKMKALEAVVNPIMSKLYQEGGMPQGGGMPGGMSNDSPKSSNNKVDELD*rnfsee
nisik*is*kiis**nq*sfsy

Frame A:
ivkirvnik*lnikkchqlvli*vqhihvlvfgkmivlkllqmikvieplhlmlhlliqn
v*lvmlqriklq*iqpiqylmlnv*lvvnlvtkkfkvi*nighsklfqrmvishifklns
kvklkfshqkkslqwys*k*kkplklilvkpliml*lpfqlismivnvkqpkmlvqfqn*
mfnvllmnqllllllmv*krkvlvkrif*fsi*---

---LFQEIXQFPCKKTQTFSTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPR
GVPQVEVTFDVDANGILNVSAEDKSTGNKQKITITNDKGRLSKEEIEKMVADAEKFKQQD
EQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEK
DEYEDKMKALEAVVNPIMSKLYQEGGMPQGGGMPGGMSNDSPKSSNNKVDELD*rnfsee
nisik*is*kiis**nq*sfsy

Frame B:
llk*e*ilnn*ilknvinwy*frynifmcwclak*sc*nyck*sr**nhsilcciy*yrt
fnw*cckesscnesnqysi*c*tfnws*i**qrssk*yetlaiqsyskgw**atyss*iq
r*n*sfltrrnlfngtlknernr*slsw*nh**ccnyrsslfq**stssnqrcwynfkik
cstyy**tncccyclwfrkerfw*keyfnfrf---

---yskkyxnshvrklkpslhtliinqvy*fkfmkvnvl*pkiiiywvnlnflvfhqhqe
vyhklklhlmlmqmvs*myqlkinqlvtnkrlqlpmikvvfqkkklkkwllmqrnsnnkm
nnkkivlnqrinwkimhsllkiqlkmkklqpkfqiqinqllnlklkvysng*nqikpqkr
mnmkir*kp*kqlsiqs*vnsikkevchkvvvcqvvcqmihqrvqttk*tn*idgifqrk
tslsnrflkk**vskinkashi

Frame C:
c*nksky*iiky*KMSSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTER
LIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFK
GETKVFSPEEISSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGTISKLN
VQRIINEPTAAAIAYGLEKKGSGEKNILIFDL---

---iprntxipm*ensnllyil**strcinssl*r*tcydqr**fig*i*tfwyststkr
ctts*syi*c*ckwylkcis*r*inw*qtkdynyq**rssfkrrn*kngc*creiqttr*
ttkrsc*ike*igklcihc*kfn*r*kscsqnfrfr*iny*i*n*kctqmvriksnrrkg
*i*r*deslrsscqsnhe*tlsrrryatrwwyarwyvk*ftkefkqqsrrirlteffrgk
hlyqidflknnklvksiklli

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFF609 (CFF609Q) /CSM/CF/CFF6-A/CFF609Q.Seq.d/                       2672   0.0
VHP437 (VHP437Q) /CSM/VH/VHP4-B/VHP437Q.Seq.d/                       1536   0.0
VHD617 (VHD617Q) /CSM/VH/VHD6-A/VHD617Q.Seq.d/                       1536   0.0
CHL177 (CHL177Q) /CSM/CH/CHL1-D/CHL177Q.Seq.d/                       1536   0.0
AFO579 (AFO579Q) /CSM/AF/AFO5-D/AFO579Q.Seq.d/                       1536   0.0
CHE894 (CHE894Q) /CSM/CH/CHE8-D/CHE894Q.Seq.d/                       1532   0.0
VHK815 (VHK815Q) /CSM/VH/VHK8-A/VHK815Q.Seq.d/                       1530   0.0
CHH293 (CHH293Q) /CSM/CH/CHH2-D/CHH293Q.Seq.d/                       1530   0.0
VHA444 (VHA444Q) /CSM/VH/VHA4-B/VHA444Q.Seq.d/                       1528   0.0
VFE138 (VFE138Q) /CSM/VF/VFE1-B/VFE138Q.Seq.d/                       1528   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

X75263|X75263.1 D.discoideum (AX3) mRNA for heat shock cognate protein (hsc70).  1495   0.0    2
L22736|L22736.1 Dictyostelium discoideum heat shock protein (hspB) gene,.  1487   0.0    2
AF025951|AF025951.1 Dictyostelium discoideum heat-shock cognate protein 70 (hsc70) mRNA, complete cds.   293   e-177  7
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.   293   e-169  11
A58313|A58313.1 Sequence 1 from Patent WO9636707.                 133   e-131  10
AX536934|AX536934.1 Sequence 535 from Patent WO02064766.          133   e-131  10
Z30210|Z30210.1 C.albicans (ATCC 20955) cahsp70 mRNA for heat shock protein 70.   133   e-130  10
AF221541|AF221541.1 Cryptosporidium serpentis heat shock protein 70 (HSP70) gene, partial cds.   145   e-122  11
AF221543|AF221543.1 Cryptosporidium muris isolate 707 heat shock protein 70 (HSP70) gene, partial cds.   123   e-114  9
AF221542|AF221542.1 Cryptosporidium muris isolate 589 heat shock protein 70 (HSP70) gene, partial cds.   109   e-113  10

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P36415) RecName: Full=Heat shock cognate 70 kDa protein 1;     ...   389   e-106
S37394(S37394) dnaK-type molecular chaperone hsc70 - slime mold ...   387   e-106
(Q557E0) RecName: Full=Heat shock cognate 70 kDa protein 2;     ...   362   2e-98
AF025951_1(AF025951|pid:none) Dictyostelium discoideum heat-shoc...   362   2e-98
U71151_1(U71151|pid:none) Pneumocystis carinii heat shock protei...   338   4e-91
U80967_1(U80967|pid:none) Pneumocystis carinii f. sp. carinii he...   338   4e-91
(Q54BE0) RecName: Full=Heat shock cognate 70 kDa protein 3;           337   8e-91
(P41753) RecName: Full=Heat shock 70 kDa protein;  &A53163(A5316...   330   7e-89
EU679414_1(EU679414|pid:none) Tetranychus cinnabarinus heat shoc...   330   7e-89
AY147871_1(AY147871|pid:none) Rhizopus stolonifer 70 kDa heat sh...   330   1e-88

 psg: 0.87  gvh: 0.35  alm: 0.45  top: 0.27  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for CFF609 is cyt

>CFF609F.Seq
ATTGTTAAAATAAGAGTAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTGGTA
TTGATTTAGGTACAACATATTCATGTGTTGGTGTTTGGCAAAATGATCGTGTTGAAATTA
TTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAGAAC
GTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTATTTG
ATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGAAAC
ATTGGCCATTCAAAGTTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAATTCA
AAGGTGAAACTAAAGTTTTCTCACCAGAAGAAATCTCTTCAATGGTACTCTTAAAAATGA
AAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGTAATTACCGTTCCAG
CTTATTTCAATGATAGTCAACGTCAAGCAACCAAAGATGCTGGTACAATTTCAAAATTAA
ATGTTCAACGTATTATTAATGAACCAACTGCTGCTGCTATTGCTTATGGTTTAGAAAAGA
AAGGTTCTGGTGAAAAGAATATTTTAATTTTCGATTTAG----------

>CFF609Z.Seq
----------TTATTCCAAGAAATACANCAATTCCCATGTAAGAAAACTCAAACCTTCTC
TACATACTCTGATAATCAACCAGGTGTATTAATTCAAGTTTATGAAGGTGAACGTGCTAT
GACCAAAGATAATAATTTATTGGGTAAATTTGAACTTTCTGGTATTCCACCAGCACCAAG
AGGTGTACCACAAGTTGAAGTTACATTTGATGTTGATGCAAATGGTATCTTAAATGTATC
AGCTGAAGATAAATCAACTGGTAACAAACAAAAGATTACAATTACCAATGATAAAGGTCG
TCTTTCAAAAGAAGAAATTGAAAAAATGGTTGCTGATGCAGAGAAATTCAAACAACAAGA
TGAACAACAAAAAGATCGTGTTGAATCAAAGAATAAATTGGAAAATTATGCATTCACTGT
TAAAAATTCAATTAAAGATGAAAAAGTTGCAGCCAAAATTTCAGATTCAGATAAATCAAC
TATTGAATCTGAAACTGAAAGTGTACTCAAATGGTTAGAATCAAATCAAACCGCAGAAAA
GGATGAATATGAAGATAAGATGAAAGCCTTAGAAGCAGTTGTCAATCCAATCATGAGTAA
ACTCTATCAAGAAGGAGGTATGCCACAAGGTGGTGGTATGCCAGGTGGTATGTCAAATGA
TTCACCAAAGAGTTCAAACAACAAAGTAGACGAATTAGATTGACGGAATTTTTCAGAGGA
AAACATCTCTATCAAATAGATTTCTTAAAAAATAATAAGTTAGTAAAATCAATAAAGCTT
CTCATATA

>CFF609P.Seq
ATTGTTAAAATAAGAGTAAATATTAAATAATTAAATATTAAAAAATGTCATCAATTGGTA
TTGATTTAGGTACAACATATTCATGTGTTGGTGTTTGGCAAAATGATCGTGTTGAAATTA
TTGCAAATGATCAAGGTAATAGAACCACTCCATCTTATGTTGCATTTACTGATACAGAAC
GTTTAATTGGTGATGCTGCAAAGAATCAAGTTGCAATGAATCCAACCAATACAGTATTTG
ATGCTAAACGTTTAATTGGTCGTAAATTTAGTGACAAAGAAGTTCAAAGTGATATGAAAC
ATTGGCCATTCAAAGTTATTCCAAAGGATGGTGATAAGCCACATATTCAAGTTGAATTCA
AAGGTGAAACTAAAGTTTTCTCACCAGAAGAAATCTCTTCAATGGTACTCTTAAAAATGA
AAGAAACCGCTGAAGCTTATCTTGGTAAAACCATTAATAATGCTGTAATTACCGTTCCAG
CTTATTTCAATGATAGTCAACGTCAAGCAACCAAAGATGCTGGTACAATTTCAAAATTAA
ATGTTCAACGTATTATTAATGAACCAACTGCTGCTGCTATTGCTTATGGTTTAGAAAAGA
AAGGTTCTGGTGAAAAGAATATTTTAATTTTCGATTTAG----------TTATTCCAAGA
AATACANCAATTCCCATGTAAGAAAACTCAAACCTTCTCTACATACTCTGATAATCAACC
AGGTGTATTAATTCAAGTTTATGAAGGTGAACGTGCTATGACCAAAGATAATAATTTATT
GGGTAAATTTGAACTTTCTGGTATTCCACCAGCACCAAGAGGTGTACCACAAGTTGAAGT
TACATTTGATGTTGATGCAAATGGTATCTTAAATGTATCAGCTGAAGATAAATCAACTGG
TAACAAACAAAAGATTACAATTACCAATGATAAAGGTCGTCTTTCAAAAGAAGAAATTGA
AAAAATGGTTGCTGATGCAGAGAAATTCAAACAACAAGATGAACAACAAAAAGATCGTGT
TGAATCAAAGAATAAATTGGAAAATTATGCATTCACTGTTAAAAATTCAATTAAAGATGA
AAAAGTTGCAGCCAAAATTTCAGATTCAGATAAATCAACTATTGAATCTGAAACTGAAAG
TGTACTCAAATGGTTAGAATCAAATCAAACCGCAGAAAAGGATGAATATGAAGATAAGAT
GAAAGCCTTAGAAGCAGTTGTCAATCCAATCATGAGTAAACTCTATCAAGAAGGAGGTAT
GCCACAAGGTGGTGGTATGCCAGGTGGTATGTCAAATGATTCACCAAAGAGTTCAAACAA
CAAAGTAGACGAATTAGATTGACGGAATTTTTCAGAGGAAAACATCTCTATCAAATAGAT
TTCTTAAAAAATAATAAGTTAGTAAAATCAATAAAGCTTCTCATATA