>CFF335 (CFF335Q) /CSM/CF/CFF3-B/CFF335Q.Seq.d/
ATATATTTTATTTGGGAAAAATAAATAAATAGAATAAATAAATATGTCAGCTCCAGTTTT
AACCACCAGTAGNGGTTCACCAATTGATAACAATTNAAACTCAATGACCGCAGGTGTTAA
TGGCCCAATTNTAATTGAAGATTNCACTTTANTTGATAAACTTGCTCATTTCGATCGNGA
ACGTATCCCAGAACGTGTTGTACATGCTAAAGGNGCTGGNGCCCATGGTTATTTCGAAGT
TACCTCANGTGATGTACCAAAANGGTGTAAAGCTNAATTCTTAAATAAAGTTGGNNAGAG
AACACCAATCTTCACCCGTTTCTCTACTGTTGGTGGNGAAAAAGGTTCATCCGATTCTGA
AAGAGATXXXXXXXXXX

yilfgknk*ie*INMSAPVLTTSXGSPIDNNXNSMTAGVNGPIXIEDXTLXDKLAHFDRE
RIPERVVHAKGAGAHGYFEVTSXDVPKXCKAXFLNKVGXRTPIFTRFSTVGGEKGSSDSE
R---

Frame A:
iyfiwek*inrinkyvsssfnhq*xftn**qxklndrrc*wpnxn*rxhfx**tcsfrsx
typrtcctc*rxwxpwlfrsylx*ctkxv*sxilk*swxentnlhpflycwwxkrfirf*
kr---


Frame B:
yilfgknk*ie*INMSAPVLTTSXGSPIDNNXNSMTAGVNGPIXIEDXTLXDKLAHFDRE
RIPERVVHAKGAGAHGYFEVTSXDVPKXCKAXFLNKVGXRTPIFTRFSTVGGEKGSSDSE
R---


Frame C:
ifylgkink*nk*icqlqf*ppvxvhqlitixtq*pqvlmaqx*lkixlxlinllisixn
vsqnvlymlkxlxpmvisklpxvmyqxgvklns*iklxrehqsspvslllvxkkvhpilk
e---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFF335 (CFF335Q) /CSM/CF/CFF3-B/CFF335Q.Seq.d/                        557   e-158
VSD165 (VSD165Q) /CSM/VS/VSD1-C/VSD165Q.Seq.d/                        541   e-153
VFN609 (VFN609Q) /CSM/VF/VFN6-A/VFN609Q.Seq.d/                        541   e-153
VFM644 (VFM644Q) /CSM/VF/VFM6-B/VFM644Q.Seq.d/                        541   e-153
VFF539 (VFF539Q) /CSM/VF/VFF5-B/VFF539Q.Seq.d/                        541   e-153
VFC407 (VFC407Q) /CSM/VF/VFC4-A/VFC407Q.Seq.d/                        541   e-153
VFA796 (VFA796Q) /CSM/VF/VFA7-D/VFA796Q.Seq.d/                        541   e-153
VFA635 (VFA635Q) /CSM/VF/VFA6-B/VFA635Q.Seq.d/                        541   e-153
VFA593 (VFA593Q) /CSM/VF/VFA5-D/VFA593Q.Seq.d/                        541   e-153
SFK459 (SFK459Q) /CSM/SF/SFK4-C/SFK459Q.Seq.d/                        541   e-153

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.   533   e-150  2
AF090443|AF090443.1 Dictyostelium discoideum catalase (cat) mRNA, complete cds.   541   e-150  1
AB064338|AB064338.1 Candida boidinii CTA1 gene for peroxisomal catalase, complete cds.    66   5e-11  2
E65314|E65314.1 Novel catalase, gene of said catalase and composition containing  said  catalase, and process for preparing catalase using the genetic engineering  technology.    64   1e-06  1
AP004595|AP004595.1 Oceanobacillus iheyensis genomic DNA, section 3/13.    60   2e-05  1
AV193169|AV193169.1 Caenorhabditis elegans cDNA clone:yk614b3 : 5' end, single read.    58   9e-05  1
C41618|C41618.1 C.elegans cDNA clone yk245f7 : 5' end, single read.    58   9e-05  1
BJ106119|BJ106119.1 Caenorhabditis elegans cDNA clone:yk1081a06 : 5' end, single read.    58   9e-05  1
AV189877|AV189877.1 Caenorhabditis elegans cDNA clone:yk563f3 : 5' end, single read.    58   9e-05  1
AU206267|AU206267.1 Caenorhabditis elegans cDNA clone:yk861f10 : 5' end, single read.    58   9e-05  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF090443_1(AF090443|pid:none) Dictyostelium discoideum catalase ...   198   4e-50
AY378080_1(AY378080|pid:none) Tetrahymena thermophila putative c...   153   2e-36
CP000560_826(CP000560|pid:none) Bacillus amyloliquefaciens FZB42...   144   9e-34
CQ796333_1(CQ796333|pid:none) Sequence 109 from Patent WO2004027...   143   2e-33
(P26901) RecName: Full=Vegetative catalase;          EC=1.11.1.6...   143   2e-33
AE017333_3935(AE017333|pid:none) Bacillus licheniformis DSM 13, ...   143   2e-33
AL009126_914(AL009126|pid:none) Bacillus subtilis subsp. subtili...   143   2e-33
(Q9XZD5) RecName: Full=Peroxisomal catalase;          EC=1.11.1....   141   8e-33
(O93662) RecName: Full=Catalase;          EC=1.11.1.6;  &AJ00593...   139   3e-32
(P90682) RecName: Full=Catalase;          EC=1.11.1.6;  &Y10611_...   136   2e-31

 psg: 0.89  gvh: 0.56  alm: 0.55  top: 0.40  tms: 0.00  mit: 0.29  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 20.0 %: extracellular, including cell wall
	 20.0 %: nuclear
	 12.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for CFF335 is cyt

>CFF335F.Seq
ATATATTTTATTTGGGAAAAATAAATAAATAGAATAAATAAATATGTCAGCTCCAGTTTT
AACCACCAGTAGNGGTTCACCAATTGATAACAATTNAAACTCAATGACCGCAGGTGTTAA
TGGCCCAATTNTAATTGAAGATTNCACTTTANTTGATAAACTTGCTCATTTCGATCGNGA
ACGTATCCCAGAACGTGTTGTACATGCTAAAGGNGCTGGNGCCCATGGTTATTTCGAAGT
TACCTCANGTGATGTACCAAAANGGTGTAAAGCTNAATTCTTAAATAAAGTTGGNNAGAG
AACACCAATCTTCACCCGTTTCTCTACTGTTGGTGGNGAAAAAGGTTCATCCGATTCTGA
AAGAGAT----------