>CFE675 (CFE675Q) /CSM/CF/CFE6-D/CFE675Q.Seq.d/
ATTATTTTTAATTTTTTTTTATTATTTTTATTATTTTTTATACATTAATTTTTTTTTAAA
AAAAAATTATTTAATTTAAATTAACAAAGATTTTGGCGCACAGATTTCAACAAAGATTTT
TTTATTAATCAATTCCACATGATTCAATAAAGGGGAAAATGAAATTACTTATTTTAACTT
TATTTTTAGCTACTATTGTTTTAGCTCAAGCTTTAACAGTACCATTAAACTTCCATCAAG
CTTCAAGAGAATCTAGAAGAAGAGTTCCACAAAAATGGTCAAACAGATTATCTGCTCTCA
ATGCTGGTACCACAATCCCAATTTCAGATTTTGAAGATGCTCAATACTATGGTGCCATTA
CCATTGGTACCCCAGGNCAAGCCTTCXXXXXXXXXXTAGTTTCATCAACACTCTTCTCCT
TCTGGTTATCAAGAACTCCAGGTGCCAACGGTGGTGAACTCTCATTCGGTTCAATCGATA
ACACCAAATACACTGGTGACATTACCTACGTCCCATTAACCAACGAAACCTATTGGGAAT
TCGTTATGGATGACTTTGCTATCGATGGTCAATCAGCTGGTTTCTGTGGTACTACTTGTC
ACGCAATTTGCGATTCAGGTACATCACTCATTGCTGGTCCAATGGCTGATATTACTGCCC
TCAATGAAAAATTAGGTGCTGTCATCTTAAATGGTGAAGGTGTCTTCTCTGATTGTAGCG
TTATCAACACCTTACCAAATGTTACCATCACCGTTGCTGGTCGTGAATTTGTTTTAACTC
CAAAAGAATACGTTTTAGAAGTTACTGAGTTCGGAAAGACTGAATGTTTGAGTGGATTTA
TGGGTATCGAGTTAAACATGGGAAATTTCTGGATCCTTGGTGATGTTTTCATCTCTGCTT
AAGTATACTGTATTCGATTTTGGTAATAAACAAGTTGGTTTCGCAACTGCCATTCAAGGT
TAAATTTTTTTAATTAATTTATATTTAAGNATAGTAAATAAAACTAAA

yf*fffiifiifytliff*kkii*fkltkilahrfqqrffy*SIPHDSIKGKMKLLILTL
FLATIVLAQALTVPLNFHQASRESRRRVPQKWSNRLSALNAGTTIPISDFEDAQYYGAIT
IGTPGQAF---

---VSSTLFSFWLSRTPGANGGELSFGSIDNTKYTGDITYVPLTNETYWEFVMDDFAIDG
QSAGFCGTTCHAICDSGTSLIAGPMADITALNEKLGAVILNGEGVFSDCSVINTLPNVTI
TVAGREFVLTPKEYVLEVTEFGKTECLSGFMGIELNMGNFWILGDVFISA*vycirfw**
tswfrnchsrlnffn*fifkxsk*n*

Frame A:
iifnffllfllffih*fffkkklfnln*qrfwrtdfnkdffinqfhmiq*rgk*nylf*l
yf*lllf*lkl*qyh*tsiklqenleeefhkngqtdyllsmlvpqsqfqilkmlntmvpl
plvpqxkp---

---*fhqhsspsgyqelqvptvvnshsvqsitpntlvtlptsh*ptkpignslwmtllsm
vnqlvsvvllvtqfaiqvhhsllvqwlillpsmkn*vlss*mvkvsslivalstpyqmlp
spllvvnlf*lqkntf*kllsserlnv*vdlwvss*tweisgslvmfssllkytvfdfgn
kqvgfataiqg*iflinlylxivnktk

Frame B:
lfliffyyfyyflyinfflkknyli*inkdfgaqistkifllinst*fnkgeneityfnf
ifsyycfsssfnstiklpssfkri*kksstkmvkqiicsqcwyhnpnfrf*rcsilwchy
hwyprxsl---

---sfintllllviknsrcqrw*tlirfnr*hqihw*hylrpinqrnllgiryg*lcyrw
siswflwyylsrnlrfryithcwsng*yycpq*kircchlkw*rcll*l*ryqhltkcyh
hrcws*icfnskrirfrsy*vrkd*mfewiygyrvkhgkfldpw*cfhlclsilysilvi
nklvsqlpfkvkff*liyi*x**ikl

Frame C:
yf*fffiifiifytliff*kkii*fkltkilahrfqqrffy*SIPHDSIKGKMKLLILTL
FLATIVLAQALTVPLNFHQASRESRRRVPQKWSNRLSALNAGTTIPISDFEDAQYYGAIT
IGTPGQAF---

---VSSTLFSFWLSRTPGANGGELSFGSIDNTKYTGDITYVPLTNETYWEFVMDDFAIDG
QSAGFCGTTCHAICDSGTSLIAGPMADITALNEKLGAVILNGEGVFSDCSVINTLPNVTI
TVAGREFVLTPKEYVLEVTEFGKTECLSGFMGIELNMGNFWILGDVFISA*vycirfw**
tswfrnchsrlnffn*fifkxsk*n*

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFE675 (CFE675Q) /CSM/CF/CFE6-D/CFE675Q.Seq.d/                       1657   0.0
SFA510 (SFA510Q) /CSM/SF/SFA5-A/SFA510Q.Seq.d/                       1136   0.0
VFN380 (VFN380Q) /CSM/VF/VFN3-D/VFN380Q.Seq.d/                       1130   0.0
AFN829 (AFN829Q) /CSM/AF/AFN8-B/AFN829Q.Seq.d/                       1130   0.0
CHB247 (CHB247Q) /CSM/CH/CHB2-B/CHB247Q.Seq.d/                       1128   0.0
VFN467 (VFN467Q) /CSM/VF/VFN4-C/VFN467Q.Seq.d/                       1126   0.0
VFN427 (VFN427Q) /CSM/VF/VFN4-B/VFN427Q.Seq.d/                       1126   0.0
VFN222 (VFN222Q) /CSM/VF/VFN2-A/VFN222Q.Seq.d/                       1126   0.0
VFM767 (VFM767Q) /CSM/VF/VFM7-C/VFM767Q.Seq.d/                       1126   0.0
VFM107 (VFM107Q) /CSM/VF/VFM1-A/VFM107Q.Seq.d/                       1126   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

Y16962|Y16962.1 Dictyostelium discoideum mRNA for cathepsin D.   1001   0.0    3
AJ243946|AJ243946.1 Dictyostelium discoideum ctsD gene for cathepsin D, exons 1 to 2.  1001   0.0    3
AL161500|AL161500.2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 12.    62   2e-05  1
BX838383|BX838383.1 Arabidopsis thaliana Full-length cDNA 5PRIM end of clone  GSLTSIL89ZD03 of Silique of strain col-0 of Arabidopsis thaliana  (thale cress).    62   2e-05  1
CD825453|CD825453.1 BN25.060N03F011129 BN25 Brassica napus cDNA clone BN25060N03, mRNA sequence.    62   2e-05  1
BX827174|BX827174.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone  GSLTLS1ZB10 of Adult vegetative tissue of strain col-0 of  Arabidopsis thaliana (thale cress).    62   2e-05  1
AF076243|AF076243.1 Arabidopsis thaliana BAC T26N6 from chromosome IV at 19.3 cM, complete sequence.    62   2e-05  1
BX829292|BX829292.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone  GSLTSIL89ZE03 of Silique of strain col-0 of Arabidopsis thaliana  (thale cress).    62   2e-05  1
AV567523|AV567523.1 Arabidopsis thaliana cDNA clone:SQL15g03F, 3' end.    62   2e-05  1
CB264640|CB264640.1 48-E014661-035-002-P12-T7R MPIZ-ADIS-035 Arabidopsis thaliana cDNA clone MPIZp2000P122Q 5-PRIME, mRNA sequence.    62   2e-05  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT080419_1(BT080419|pid:none) Caligus clemensi clone ccle-evs-50...   169   9e-42
(Q03168) RecName: Full=Lysosomal aspartic protease;          EC=...   157   1e-39
DQ909010_1(DQ909010|pid:none) Clonorchis sinensis aspartic prote...   153   1e-38
EF213114_1(EF213114|pid:none) Penaeus monodon cathepsin D mRNA, ...   157   2e-38
FJ168036_1(FJ168036|pid:none) Fasciola hepatica cathepsin D-like...   152   5e-38
DQ010007_1(DQ010007|pid:none) Bombyx mori CathD mRNA, complete c...   153   5e-38
DQ131585_1(DQ131585|pid:none) Opisthorchis viverrini cathepsin D...   150   2e-37
EF070454_1(EF070454|pid:none) Maconellicoccus hirsutus clone WHM...   149   3e-37
AB078420_1(AB078420|pid:none) Brugia malayi asp-2 mRNA for aspar...   146   3e-36
EF000001_1(EF000001|pid:none) Fasciola hepatica cathepsin D-like...   147   3e-36

 psg: 0.86  gvh: 0.77  alm: 0.43  top: 0.60  tms: 0.00  mit: 0.32  mip: 0.10
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.33  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: extracellular, including cell wall
	 24.0 %: nuclear
	 20.0 %: mitochondrial
	 12.0 %: cytoplasmic
	  8.0 %: vacuolar
	  4.0 %: cytoskeletal

>> prediction for CFE675 is exc

>CFE675F.Seq
ATTATTTTTAATTTTTTTTTATTATTTTTATTATTTTTTATACATTAATTTTTTTTTAAA
AAAAAATTATTTAATTTAAATTAACAAAGATTTTGGCGCACAGATTTCAACAAAGATTTT
TTTATTAATCAATTCCACATGATTCAATAAAGGGGAAAATGAAATTACTTATTTTAACTT
TATTTTTAGCTACTATTGTTTTAGCTCAAGCTTTAACAGTACCATTAAACTTCCATCAAG
CTTCAAGAGAATCTAGAAGAAGAGTTCCACAAAAATGGTCAAACAGATTATCTGCTCTCA
ATGCTGGTACCACAATCCCAATTTCAGATTTTGAAGATGCTCAATACTATGGTGCCATTA
CCATTGGTACCCCAGGNCAAGCCTTC----------

>CFE675Z.Seq
----------TAGTTTCATCAACACTCTTCTCCTTCTGGTTATCAAGAACTCCAGGTGCC
AACGGTGGTGAACTCTCATTCGGTTCAATCGATAACACCAAATACACTGGTGACATTACC
TACGTCCCATTAACCAACGAAACCTATTGGGAATTCGTTATGGATGACTTTGCTATCGAT
GGTCAATCAGCTGGTTTCTGTGGTACTACTTGTCACGCAATTTGCGATTCAGGTACATCA
CTCATTGCTGGTCCAATGGCTGATATTACTGCCCTCAATGAAAAATTAGGTGCTGTCATC
TTAAATGGTGAAGGTGTCTTCTCTGATTGTAGCGTTATCAACACCTTACCAAATGTTACC
ATCACCGTTGCTGGTCGTGAATTTGTTTTAACTCCAAAAGAATACGTTTTAGAAGTTACT
GAGTTCGGAAAGACTGAATGTTTGAGTGGATTTATGGGTATCGAGTTAAACATGGGAAAT
TTCTGGATCCTTGGTGATGTTTTCATCTCTGCTTAAGTATACTGTATTCGATTTTGGTAA
TAAACAAGTTGGTTTCGCAACTGCCATTCAAGGTTAAATTTTTTTAATTAATTTATATTT
AAGNATAGTAAATAAAACTAAA

>CFE675P.Seq
ATTATTTTTAATTTTTTTTTATTATTTTTATTATTTTTTATACATTAATTTTTTTTTAAA
AAAAAATTATTTAATTTAAATTAACAAAGATTTTGGCGCACAGATTTCAACAAAGATTTT
TTTATTAATCAATTCCACATGATTCAATAAAGGGGAAAATGAAATTACTTATTTTAACTT
TATTTTTAGCTACTATTGTTTTAGCTCAAGCTTTAACAGTACCATTAAACTTCCATCAAG
CTTCAAGAGAATCTAGAAGAAGAGTTCCACAAAAATGGTCAAACAGATTATCTGCTCTCA
ATGCTGGTACCACAATCCCAATTTCAGATTTTGAAGATGCTCAATACTATGGTGCCATTA
CCATTGGTACCCCAGGNCAAGCCTTC----------TAGTTTCATCAACACTCTTCTCCT
TCTGGTTATCAAGAACTCCAGGTGCCAACGGTGGTGAACTCTCATTCGGTTCAATCGATA
ACACCAAATACACTGGTGACATTACCTACGTCCCATTAACCAACGAAACCTATTGGGAAT
TCGTTATGGATGACTTTGCTATCGATGGTCAATCAGCTGGTTTCTGTGGTACTACTTGTC
ACGCAATTTGCGATTCAGGTACATCACTCATTGCTGGTCCAATGGCTGATATTACTGCCC
TCAATGAAAAATTAGGTGCTGTCATCTTAAATGGTGAAGGTGTCTTCTCTGATTGTAGCG
TTATCAACACCTTACCAAATGTTACCATCACCGTTGCTGGTCGTGAATTTGTTTTAACTC
CAAAAGAATACGTTTTAGAAGTTACTGAGTTCGGAAAGACTGAATGTTTGAGTGGATTTA
TGGGTATCGAGTTAAACATGGGAAATTTCTGGATCCTTGGTGATGTTTTCATCTCTGCTT
AAGTATACTGTATTCGATTTTGGTAATAAACAAGTTGGTTTCGCAACTGCCATTCAAGGT
TAAATTTTTTTAATTAATTTATATTTAAGNATAGTAAATAAAACTAAA