>CFD875 (CFD875Q) /CSM/CF/CFD8-D/CFD875Q.Seq.d/
AAGGATGCATAAAATTGTTCAACAAGGTAGTAAATCATTAATTGAATCAAGAATTAAAAG
AAAATCATTATTAAGTAAAGTTGTTACAGATGTTAGTCAATTGATACCATATTTTCAAAA
TGGACATTATGTGTCTATGGGTGGATTTGCAGGTACAGGTTATCCAAAGGTAGTACCAAT
TGCATTGGCAGACCATGTGGAAAAAAATGGATTACAGGGTAAATTAAAAATGAATTTATT
TGTTGGAGCATCAGTTGGACCAGAGACAGAAGATCGTTGGGCAATGTTGGATATGATAGA
TAAGAGATATCCTCACCAAAATGGACATCACATTCGTAATGGTATAAATAGCGGTAGAAT
TCGTTTTGCCGATCAACATTTATCGACATTTGCAAGTGATTTATTGGCTGGATATTATAC
ATTGGATAAACCACATGGATCAAAGAGAACAATGGATATAGCAATCGTTGAAGCCACAGA
AATCACCGAAGACGGTTGTATAGTACCAGGTGCATCCGTTGGTATCACACCTGAGATCTT
ACAAATGGCAGATAAAATCATCATTGAGATTAACACCTCATTXXXXXXXXXX

RMHKIVQQGSKSLIESRIKRKSLLSKVVTDVSQLIPYFQNGHYVSMGGFAGTGYPKVVPI
ALADHVEKNGLQGKLKMNLFVGASVGPETEDRWAMLDMIDKRYPHQNGHHIRNGINSGRI
RFADQHLSTFASDLLAGYYTLDKPHGSKRTMDIAIVEATEITEDGCIVPGASVGITPEIL
QMADKIIIEINTS---

Frame A:
kda*ncstr**iin*ikn*kkiiik*scyrc*sidtifskwtlcvygwicryrlskgstn
cigrpcgkkwitg*ikneficwsiswtrdrrslgnvgydr*eisspkwtshs*wyk*r*n
sfcrstfidick*figwilyig*ttwikenngysnr*shrnhrrrlystrcirwyht*dl
tngr*nhh*d*hl---


Frame B:
RMHKIVQQGSKSLIESRIKRKSLLSKVVTDVSQLIPYFQNGHYVSMGGFAGTGYPKVVPI
ALADHVEKNGLQGKLKMNLFVGASVGPETEDRWAMLDMIDKRYPHQNGHHIRNGINSGRI
RFADQHLSTFASDLLAGYYTLDKPHGSKRTMDIAIVEATEITEDGCIVPGASVGITPEIL
QMADKIIIEINTS---


Frame C:
gciklfnkvvnh*lnqelkenhy*vkllqmlvn*yhifkmdimclwvdlqvqviqr*yql
hwqtmwkkmdyrvn*k*iyllehqldqrqkivgqcwi**irdiltkmditfvmv*iavef
vlpiniyrhlqviywldiihwinhmdqreqwi*qslkpqkspktvv*yqvhplvshlrsy
kwqiksslrltph---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHD514 (CHD514Q) /CSM/CH/CHD5-A/CHD514Q.Seq.d/                       1112   0.0
CHC860 (CHC860Q) /CSM/CH/CHC8-C/CHC860Q.Seq.d/                       1112   0.0
CHC245 (CHC245Q) /CSM/CH/CHC2-B/CHC245Q.Seq.d/                       1112   0.0
CHA251 (CHA251Q) /CSM/CH/CHA2-C/CHA251Q.Seq.d/                       1112   0.0
CFK307 (CFK307Q) /CSM/CF/CFK3-A/CFK307Q.Seq.d/                       1112   0.0
CFK206 (CFK206Q) /CSM/CF/CFK2-A/CFK206Q.Seq.d/                       1112   0.0
CFF387 (CFF387Q) /CSM/CF/CFF3-D/CFF387Q.Seq.d/                       1112   0.0
CFD875 (CFD875Q) /CSM/CF/CFD8-D/CFD875Q.Seq.d/                       1112   0.0
AHQ401 (AHQ401Q) /CSM/AH/AHQ4-A/AHQ401Q.Seq.d/                       1112   0.0
AFN181 (AFN181Q) /CSM/AF/AFN1-D/AFN181Q.Seq.d/                       1112   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AL022475|AL022475.12 Caenorhabditis elegans DNA *** SEQUENCING IN PROGRESS *** from clone Y67H2.    40   0.029  8
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    42   0.031  4
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    34   0.066  8
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    32   0.10   13
AP003688|AP003688.1 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0706G04, WORKING DRAFT SEQUENCE, 1 ordered piece.    34   0.11   5
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, complete sequence, section 1/5.    38   0.11   7
AL928750|AL928750.3 Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa  from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza  sativa (rice).    46   0.12   3
AE017033|AE017033.1 Bacillus anthracis str. Ames section 10 of 18 of the complete genome.    32   0.12   8
AE016747|AE016747.1 Staphylococcus epidermidis ATCC 12228, section 4 of 9 of the complete genome.    36   0.34   7
AP004317|AP004317.1 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0663E10.    34   0.36   5

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54K91) RecName: Full=Acetyl-CoA hydrolase;          EC=3.1.2.1...   386   e-106
AM920427_313(AM920427|pid:none) Penicillium chrysogenum Wisconsi...   222   5e-57
CU633453_78(CU633453|pid:none) Podospora anserina genomic DNA ch...   221   1e-56
AP007151_504(AP007151|pid:none) Aspergillus oryzae RIB40 genomic...   219   4e-56
(Q9UUJ9) RecName: Full=Acetyl-CoA hydrolase;          EC=3.1.2.1...   219   4e-56
CP000698_3955(CP000698|pid:none) Geobacter uraniireducens Rf4, c...   211   1e-53
CP001124_464(CP001124|pid:none) Geobacter bemidjiensis Bem, comp...   209   6e-53
CP001124_3856(CP001124|pid:none) Geobacter bemidjiensis Bem, com...   206   3e-52
CP001089_334(CP001089|pid:none) Geobacter lovleyi SZ, complete g...   206   5e-52
AE017180_488(AE017180|pid:none) Geobacter sulfurreducens PCA, co...   205   8e-52

 psg: 0.56  gvh: 0.45  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.38  mip: 0.05
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.50  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: nuclear
	 28.0 %: cytoplasmic
	 24.0 %: mitochondrial
	  4.0 %: extracellular, including cell wall
	  4.0 %: endoplasmic reticulum

>> prediction for CFD875 is nuc

>CFD875F.Seq
AAGGATGCATAAAATTGTTCAACAAGGTAGTAAATCATTAATTGAATCAAGAATTAAAAG
AAAATCATTATTAAGTAAAGTTGTTACAGATGTTAGTCAATTGATACCATATTTTCAAAA
TGGACATTATGTGTCTATGGGTGGATTTGCAGGTACAGGTTATCCAAAGGTAGTACCAAT
TGCATTGGCAGACCATGTGGAAAAAAATGGATTACAGGGTAAATTAAAAATGAATTTATT
TGTTGGAGCATCAGTTGGACCAGAGACAGAAGATCGTTGGGCAATGTTGGATATGATAGA
TAAGAGATATCCTCACCAAAATGGACATCACATTCGTAATGGTATAAATAGCGGTAGAAT
TCGTTTTGCCGATCAACATTTATCGACATTTGCAAGTGATTTATTGGCTGGATATTATAC
ATTGGATAAACCACATGGATCAAAGAGAACAATGGATATAGCAATCGTTGAAGCCACAGA
AATCACCGAAGACGGTTGTATAGTACCAGGTGCATCCGTTGGTATCACACCTGAGATCTT
ACAAATGGCAGATAAAATCATCATTGAGATTAACACCTCATT----------