>CFD787 (CFD787Q) /CSM/CF/CFD7-D/CFD787Q.Seq.d/
AAAAATAAAAATAAAAATAAAAATTTAATTAATTAATTGAATCTATCCAATTCAAAAAAA
TTAAAAAATAAATTAATTTATTCTGTAATATAAAAATAAAGATTTTTTTTATTTTTTTAA
TATTAAAAATGAAATTAAATAATTCATTTTTTTTTATGTCGGTAATATTTGTATTTTTAA
TAATAATACAATTTTCAACTGCAACATATTCAAAATCAGAAATTGAATATTATAAAAGAT
TTGGATATAATTTGGAAACTGGAGAATATACTCGGTCTTCACCACACCAACACCAACAAC
AATATCAACAACAACCACAATCACGTCAACGTAATAGACACAATAGTCGTTATGGTAGTG
AAAGAAGATCAAGACAAAATCCATATAATGAAGATTATTATTCCAATCAAAATTATTACC
AACAAACTTCAAATGATTTGGATGAAACGGCACCAGTTTATAAACAAGGTGTTTCAATTC
CAAAAAATATCAATGTTGGAATTAGTATTGATGAGGTAACACCAAATGTCATAGTTGAAA
CTAATAAACCTACCTTTTCACAATCGTTAAXXXXXXXXXX

k*k*k*kfn*liesiqfkkikk*INLFCNIKIKIFFIFLILKMKLNNSFFFMSVIFVFLI
IIQFSTATYSKSEIEYYKRFGYNLETGEYTRSSPHQHQQQYQQQPQSRQRNRHNSRYGSE
RRSRQNPYNEDYYSNQNYYQQTSNDLDETAPVYKQGVSIPKNINVGISIDEVTPNVIVET
NKPTFSQSL---

Frame A:
knknknknlin*lnlsnskklknkliysvi*k*rfflff*y*k*n*iihfflcr*ylyf*
**ynfqlqhiqnqklniikdldiiwklenilglhhtntnnninnnhnhvnvidtivvmvv
kedqdkihimkiiipikiitnklqmiwmkrhqfinkvfqfqkismlelvlmr*hqms*lk
linlpfhnr---


Frame B:
kikikiki*lin*iypiqkn*kin*fil*yknkdffyffnikneik*fiffyvgnicifn
nntifncnifkirn*il*kiwi*fgnwriysvfttptpttisttttitst**tq*slw**
kkiktksi**rllfqskllptnfk*fg*ngtsl*trcfnskkyqcwn*y**gntkchs*n
**tylftiv---


Frame C:
k*k*k*kfn*liesiqfkkikk*INLFCNIKIKIFFIFLILKMKLNNSFFFMSVIFVFLI
IIQFSTATYSKSEIEYYKRFGYNLETGEYTRSSPHQHQQQYQQQPQSRQRNRHNSRYGSE
RRSRQNPYNEDYYSNQNYYQQTSNDLDETAPVYKQGVSIPKNINVGISIDEVTPNVIVET
NKPTFSQSL---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SFI214 (SFI214Q) /CSM/SF/SFI2-A/SFI214Q.Seq.d/                        476   e-133
CFD787 (CFD787Q) /CSM/CF/CFD7-D/CFD787Q.Seq.d/                        476   e-133
SLH292 (SLH292Q) /CSM/SL/SLH2-D/SLH292Q.Seq.d/                        264   1e-69
SLD846 (SLD846Q) /CSM/SL/SLD8-B/SLD846Q.Seq.d/                        192   4e-48
VHH496 (VHH496Q) /CSM/VH/VHH4-D/VHH496Q.Seq.d/                         44   0.002
VHC744 (VHC744Q) /CSM/VH/VHC7-B/VHC744Q.Seq.d/                         44   0.002
VFO169 (VFO169Q) /CSM/VF/VFO1-C/VFO169Q.Seq.d/                         44   0.002
CHG659 (CHG659Q) /CSM/CH/CHG6-C/CHG659Q.Seq.d/                         44   0.002
CFF781 (CFF781Q) /CSM/CF/CFF7-D/CFF781Q.Seq.d/                         44   0.002
VHN561 (VHN561Q) /CSM/VH/VHN5-C/VHN561Q.Seq.d/                         42   0.009

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    42   3e-08  19
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.    44   3e-07  19
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence.    32   4e-07  18
AJ011856|AJ011856.1 Saccharomyces cerevisiae complete mitochondrial genome.    34   8e-07  11
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 map 3622643-3879522 strain AX4, complete sequence.    34   1e-06  12
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.           34   1e-06  20
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4.    32   3e-06  15
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    38   3e-06  19
AE014834|AE014834.1 Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete sequence.    34   5e-06  13
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4, complete sequence.    38   6e-06  15

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54QR5) RecName: Full=Uncharacterized transmembrane protein DDB...   189   6e-47

 psg: 1.02  gvh: 0.64  alm: 0.20  top: 0.60  tms: 0.13  mit: 0.35  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 1.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: plasma membrane
	 16.0 %: nuclear
	 12.0 %: vacuolar
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: cytoplasmic

>> prediction for CFD787 is end

>CFD787F.Seq
AAAAATAAAAATAAAAATAAAAATTTAATTAATTAATTGAATCTATCCAATTCAAAAAAA
TTAAAAAATAAATTAATTTATTCTGTAATATAAAAATAAAGATTTTTTTTATTTTTTTAA
TATTAAAAATGAAATTAAATAATTCATTTTTTTTTATGTCGGTAATATTTGTATTTTTAA
TAATAATACAATTTTCAACTGCAACATATTCAAAATCAGAAATTGAATATTATAAAAGAT
TTGGATATAATTTGGAAACTGGAGAATATACTCGGTCTTCACCACACCAACACCAACAAC
AATATCAACAACAACCACAATCACGTCAACGTAATAGACACAATAGTCGTTATGGTAGTG
AAAGAAGATCAAGACAAAATCCATATAATGAAGATTATTATTCCAATCAAAATTATTACC
AACAAACTTCAAATGATTTGGATGAAACGGCACCAGTTTATAAACAAGGTGTTTCAATTC
CAAAAAATATCAATGTTGGAATTAGTATTGATGAGGTAACACCAAATGTCATAGTTGAAA
CTAATAAACCTACCTTTTCACAATCGTTAA----------