>CFD730 (CFD730Q) /CSM/CF/CFD7-B/CFD730Q.Seq.d/
ATTCATTTTATTTTTAATCAATTCAAATTAAAAAAAAAACAATAACTAACTAAGTTAAAA
ATAAAAAAATAATAAAGGATGTTGTTTCTAAAAAATATTGGAGTATTTTTTATGATATTC
CTTGTATCAGAATCCTATGCGACGGATTGTAATAAAATTACTAATGAAGAAGAATGCCAT
AAATCTTCGGAATGTATTGTTATAAATATTACACCATGTTGNGGTGAACAAAAATGGGCT
TGCTCTAAAGGTACATTTGATACTTGTACATATGAAAATAGTTGTTATAGAAATTCATCC
AATAACCAAGTTGTTGAAGTATCAAATAAATGCTTCAATCTTGATGGATTTATTAAAATT
ACAACTCCAACCGAGTATTCTTGTTCTGATGCCAAGATTAAAGAATGTGCCTTATTAGGT
AAATCATGTAGTTTCCAAAAGAACTCTTGTTCAAATCCAACTTCCTGTTGCCCAGGTGAA
TCAATTTGTGAAGGTTTAAGCTCTGGTAGTTCAACATXXXXXXXXXX

ihfifnqfklkkkq*ltklkikk**RMLFLKNIGVFFMIFLVSESYATDCNKITNEEECH
KSSECIVINITPCXGEQKWACSKGTFDTCTYENSCYRNSSNNQVVEVSNKCFNLDGFIKI
TTPTEYSCSDAKIKECALLGKSCSFQKNSCSNPTSCCPGESICEGLSSGSST---

Frame A:
ihfifnqfklkkkq*ltklkikk**RMLFLKNIGVFFMIFLVSESYATDCNKITNEEECH
KSSECIVINITPCXGEQKWACSKGTFDTCTYENSCYRNSSNNQVVEVSNKCFNLDGFIKI
TTPTEYSCSDAKIKECALLGKSCSFQKNSCSNPTSCCPGESICEGLSSGSST---


Frame B:
filflinsn*kknnn*ls*k*knnkgccf*kileyfl*yslyqnpmrrivikllmkknai
nlrnvll*ilhhvxvnknglalkvhlilvhmkivvieihpitkllkyqinasilmdllkl
qlqpsilvlmprlknvpy*vnhvvskrtlvqiqlpvaqvnqfvkv*alvvq---


Frame C:
sfyf*siqikkktitn*vknkkiikdvvskkywsifydipcirilcdgl**ny**rrmp*
ifgmycykyytmlx*tkmgll*ryi*ylyi*k*ll*kfiq*psc*sik*mlqs*wiy*ny
nsnrvflf*cqd*rmclir*im*fpkellfksnfllpr*inl*rfklw*fn---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFD730 (CFD730Q) /CSM/CF/CFD7-B/CFD730Q.Seq.d/                        831   0.0
CFD715 (CFD715Q) /CSM/CF/CFD7-A/CFD715Q.Seq.d/                        825   0.0
SLG501 (SLG501Q) /CSM/SL/SLG5-A/SLG501Q.Seq.d/                        799   0.0
SFL250 (SFL250Q) /CSM/SF/SFL2-C/SFL250Q.Seq.d/                        799   0.0
SFK426 (SFK426Q) /CSM/SF/SFK4-B/SFK426Q.Seq.d/                        799   0.0
SFK212 (SFK212Q) /CSM/SF/SFK2-A/SFK212Q.Seq.d/                        799   0.0
SFJ633 (SFJ633Q) /CSM/SF/SFJ6-B/SFJ633Q.Seq.d/                        799   0.0
SFJ257 (SFJ257Q) /CSM/SF/SFJ2-C/SFJ257Q.Seq.d/                        799   0.0
SFI696 (SFI696Q) /CSM/SF/SFI6-D/SFI696Q.Seq.d/                        799   0.0
SFI216 (SFI216Q) /CSM/SF/SFI2-A/SFI216Q.Seq.d/                        799   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

U25144|U25144.1 Dictyostelium discoideum spore coat protein SP87 (PspD) gene, complete cds.   654   0.0    4
AC117267|AC117267.1 Dictyostelium discoideum chromosome 2 map 4767688-4790343 strain AX4, *** SEQUENCING IN PROGRESS ***, in ordered pieces.   654   0.0    5
AC115610|AC115610.2 Dictyostelium discoideum chromosome 2 map 5836255-5862024 strain AX4, complete sequence.   654   0.0    5
AX348726|AX348726.1 Sequence 184 from Patent WO0202807.            32   0.008  5
AX344319|AX344319.1 Sequence 166 from Patent WO0200926.            32   0.008  5
AX251923|AX251923.1 Sequence 184 from Patent WO0168911.            32   0.008  5
BX248585|BX248585.1 Blochmannia floridanus complete genome; segment 2/3.    34   0.069  12
BX000486|BX000486.6 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone DKEY-149M16.    34   0.074  7
AC113397|AC113397.2 Homo sapiens chromosome 5 clone RP11-433B15, complete sequence.    38   0.092  7
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 map 1685067-2090751 strain AX4, complete sequence.    34   0.12   11

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...   239   3e-62
(Q6TU45) RecName: Full=Probable spore coat protein sigD; AltName...   102   4e-21
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;        47   2e-04
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...    44   0.002
(Q99088) RecName: Full=Low-density lipoprotein receptor 2;      ...    36   0.64
QRXLL2(B40388)LDL receptor 2 precursor - African clawed frog           36   0.64
(Q99087) RecName: Full=Low-density lipoprotein receptor 1;      ...    35   0.84
BC170345_1(BC170345|pid:none) Xenopus laevis low density lipopro...    35   0.84
QRXLL1(A40388)LDL receptor 1 precursor - African clawed frog           35   0.84
AM494971_153(AM494971|pid:none) Leishmania braziliensis chromoso...    34   1.9

 psg: 1.02  gvh: 0.70  alm: 0.51  top: 0.07  tms: 0.00  mit: 0.35  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: extracellular, including cell wall
	 24.0 %: cytoplasmic
	 12.0 %: endoplasmic reticulum
	  8.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: nuclear

>> prediction for CFD730 is exc

>CFD730F.Seq
ATTCATTTTATTTTTAATCAATTCAAATTAAAAAAAAAACAATAACTAACTAAGTTAAAA
ATAAAAAAATAATAAAGGATGTTGTTTCTAAAAAATATTGGAGTATTTTTTATGATATTC
CTTGTATCAGAATCCTATGCGACGGATTGTAATAAAATTACTAATGAAGAAGAATGCCAT
AAATCTTCGGAATGTATTGTTATAAATATTACACCATGTTGNGGTGAACAAAAATGGGCT
TGCTCTAAAGGTACATTTGATACTTGTACATATGAAAATAGTTGTTATAGAAATTCATCC
AATAACCAAGTTGTTGAAGTATCAAATAAATGCTTCAATCTTGATGGATTTATTAAAATT
ACAACTCCAACCGAGTATTCTTGTTCTGATGCCAAGATTAAAGAATGTGCCTTATTAGGT
AAATCATGTAGTTTCCAAAAGAACTCTTGTTCAAATCCAACTTCCTGTTGCCCAGGTGAA
TCAATTTGTGAAGGTTTAAGCTCTGGTAGTTCAACAT----------