CFD712
Library CF
(Link to library)
Clone ID CFD712
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U11574-1
Original site URL
Representative seq. ID CFD712F
(Link to Original site)
Representative DNA sequence
>CFD712 (CFD712Q) /CSM/CF/CFD7-A/CFD712Q.Seq.d/
AAAAAGAATAAAAAAACAATAGTTTGTATAGAAGCATATTAAAAAAATAAATAAAATTCA
AAAATAGTAATAATAAAGTGTATATAGAATAAATAAAAAAAAAAXXXXXXXXXX
sequence update 2001. 6. 1
Translated Amino Acid sequence
KKNKKTIVCIEAY*knk*nskiviikci*nk*kk---


Translated Amino Acid sequence (All Frames)
Frame A:
KKNKKTIVCIEAY*knk*nskiviikci*nk*kk---


Frame B:
krikkq*fv*khikkinkiqk****svyrinkkk---


Frame C:
ke*knnslyrsilkk*ikfknsnnkvyie*ikk---


Homology vs CSM-cDNA -
own update ----------
Homology vs DNA

***** No hits found ******

Lambda K H
-1.00 -1.00 -1.00

[blastall] WARNING: [000.000] CFD712: SetUpBlastSearch failed.
[blastall] ERROR: [000.000] CFD712: BLASTSetUpSearch: Unable to calculate Karlin-Altschul params, check query sequence

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.








Dictyostelium discoideum cDNA Project Home



dna update 2004. 1.26
Homology vs Protein

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 57,406,265
protein update 2009. 5.13
PSORT -
5' end seq. ID CFD712F
5' end seq.
>CFD712F.Seq
AAAAAGAATAAAAAAACAATAGTTTGTATAGAAGCATATTAAAAAAATAAATAAAATTCA
AAAATAGTAATAATAAAGTGTATATAGAATAAATAAAAAAAAAA----------
Length of 5' end seq. 104
3' end seq. ID -
3' end seq. -
Length of 3' end seq. -
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -