>CFD648 (CFD648Q) /CSM/CF/CFD6-B/CFD648Q.Seq.d/
ATTCATTCAATTTTGTAATTATAAAAAAAGGAATCAAATAATTATATATATATATAAAAA
TATAAAAAAAATAAAATGAGAATTTTATATTTAGCTTCTCTTTTATTTTTAACTACATTA
TATCTATCACCAACTTTTGGTTGGGGTGGTGGCAGAGATTGTGAAAGTCATCGTTCAGAA
TATACATGTAAATCAGATAGAAGTTGTGCATATTTACCATTTGTATCATGTTGTGGTAAG
AAAGAATTTTTCTGTGTTAATCGTGATCATAGAAATTGTTGTGATGATTTATCATGTGCT
AAAAACACGAGAACTGGTGAAATCTTTGAGATTTGGTCAAGTTGTAGACCACATAGAGAT
TTTGTACCATATCATTCACCAAATACAACCACATGTGAATCATTAGGTTGTGAAGCAAGA
GGTATGGAATGTGAATGGGTTGAATCATCACCATGTTATGGAACTTCTTGTTGCCCAAGA
ATTCCAAGATGTGTTGGTCATCATGGTGGCGGTCATAAATGTGACAGAATGAGATGTCCA
GAAGGATTCTATXXXXXXXXXX

ihsil*l*kkesnnyiyi*KYKKNKMRILYLASLLFLTTLYLSPTFGWGGGRDCESHRSE
YTCKSDRSCAYLPFVSCCGKKEFFCVNRDHRNCCDDLSCAKNTRTGEIFEIWSSCRPHRD
FVPYHSPNTTTCESLGCEARGMECEWVESSPCYGTSCCPRIPRCVGHHGGGHKCDRMRCP
EGF---

Frame A:
ihsil*l*kkesnnyiyi*KYKKNKMRILYLASLLFLTTLYLSPTFGWGGGRDCESHRSE
YTCKSDRSCAYLPFVSCCGKKEFFCVNRDHRNCCDDLSCAKNTRTGEIFEIWSSCRPHRD
FVPYHSPNTTTCESLGCEARGMECEWVESSPCYGTSCCPRIPRCVGHHGGGHKCDRMRCP
EGF---


Frame B:
fiqfcnykkrnqiiiyiyknikkik*efyi*llfyf*lhyiyhqllvgvvaeivkvivqn
ihvnqievvhiyhlyhvvvrknfsvliviieivvmiyhvlktrelvkslrfgqvvdhiei
lyhiihqiqphvnh*vvkqevwnvnglnhhhvmellvaqefqdvlvimvavinvte*dvq
kds---


Frame C:
sfnfviikkgik*lyiyiki*kk*nenfifsfsfifnyiisitnfwlgwwqrl*kssfri
ym*ir*klcifticimlw*eriflc*s*s*kll**fimc*khenw*nl*dlvkl*tt*rf
ctisftkynhm*iirl*skrygm*mg*iitmlwnfllpknskmcwsswwrs*m*qnemsr
ril---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFD648 (CFD648Q) /CSM/CF/CFD6-B/CFD648Q.Seq.d/                        954   0.0
SFI626 (SFI626Q) /CSM/SF/SFI6-B/SFI626Q.Seq.d/                        946   0.0
SLG851 (SLG851Q) /CSM/SL/SLG8-C/SLG851Q.Seq.d/                        938   0.0
SLB538 (SLB538Q) /CSM/SL/SLB5-B/SLB538Q.Seq.d/                        938   0.0
SLA438 (SLA438Q) /CSM/SL/SLA4-B/SLA438Q.Seq.d/                        938   0.0
SLA432 (SLA432Q) /CSM/SL/SLA4-B/SLA432Q.Seq.d/                        938   0.0
SLA402 (SLA402Q) /CSM/SL/SLA4-A/SLA402Q.Seq.d/                        938   0.0
SHH249 (SHH249Q) /CSM/SH/SHH2-C/SHH249Q.Seq.d/                        938   0.0
SHF542 (SHF542Q) /CSM/SH/SHF5-B/SHF542Q.Seq.d/                        938   0.0
SHD608 (SHD608Q) /CSM/SH/SHD6-A/SHD608Q.Seq.d/                        938   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

D13973|D13973.1 Dictyostelium discoideum DNA for Dp87 protein, complete cds.   771   0.0    3
AC129728|AC129728.3 Rattus norvegicus clone CH230-355E4, *** SEQUENCING IN PROGRESS ***, 19 unordered pieces.    40   0.35   8
CK537714|CK537714.1 rswgb0_006975.y1 swg Bombyx mori cDNA, mRNA sequence.    46   0.53   1
CK533459|CK533459.1 rswgb0_001445.y1 swg Bombyx mori cDNA, mRNA sequence.    46   0.53   1
AC102684|AC102684.3 Mus musculus clone RP24-301F17, *** SEQUENCING IN PROGRESS ***.    32   0.75   8
BX088575|BX088575.7 Mouse DNA sequence *** SEQUENCING IN PROGRESS *** from clone  RP24-277G11.    32   0.76   8
AG037437|AG037437.1 Pan troglodytes DNA, clone: PTB-013L01.F.      32   1.4    2
AC141638|AC141638.2 Mus musculus chromosome UNK clone RP23-415K1, WORKING DRAFT SEQUENCE, 8 unordered pieces.    44   2.1    1
AC119658|AC119658.8 Rattus norvegicus clone CH230-486P2, WORKING DRAFT SEQUENCE, 1 ordered piece.    44   2.1    1
BX853335|BX853335.1 RZPD Xenopus laevis cDNA clone IMAGp998K018297 = IMAGE:3400056 5'  EST.    44   2.1    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;       332   5e-90
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...   328   6e-89
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...   137   1e-31
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...    96   5e-19
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...    64   3e-09
B25439(B25439)Beejin protein - slime mold (Dictyostelium discoid...    62   1e-08
(Q6TU45) RecName: Full=Probable spore coat protein sigD; AltName...    53   5e-06
AC117076_50(AC117076|pid:none) Dictyostelium discoideum chromoso...    52   1e-05
AC117076_49(AC117076|pid:none) Dictyostelium discoideum chromoso...    47   3e-04
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ...    40   0.053

 psg: 0.94  gvh: 0.74  alm: 0.47  top: 0.10  tms: 0.00  mit: 0.33  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: extracellular, including cell wall
	 16.0 %: cytoplasmic
	 12.0 %: endoplasmic reticulum
	  8.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system
	  4.0 %: nuclear

>> prediction for CFD648 is exc

>CFD648F.Seq
ATTCATTCAATTTTGTAATTATAAAAAAAGGAATCAAATAATTATATATATATATAAAAA
TATAAAAAAAATAAAATGAGAATTTTATATTTAGCTTCTCTTTTATTTTTAACTACATTA
TATCTATCACCAACTTTTGGTTGGGGTGGTGGCAGAGATTGTGAAAGTCATCGTTCAGAA
TATACATGTAAATCAGATAGAAGTTGTGCATATTTACCATTTGTATCATGTTGTGGTAAG
AAAGAATTTTTCTGTGTTAATCGTGATCATAGAAATTGTTGTGATGATTTATCATGTGCT
AAAAACACGAGAACTGGTGAAATCTTTGAGATTTGGTCAAGTTGTAGACCACATAGAGAT
TTTGTACCATATCATTCACCAAATACAACCACATGTGAATCATTAGGTTGTGAAGCAAGA
GGTATGGAATGTGAATGGGTTGAATCATCACCATGTTATGGAACTTCTTGTTGCCCAAGA
ATTCCAAGATGTGTTGGTCATCATGGTGGCGGTCATAAATGTGACAGAATGAGATGTCCA
GAAGGATTCTAT----------