>CFD580 (CFD580Q) /CSM/CF/CFD5-D/CFD580Q.Seq.d/
AAATAAAAATAAAAAATAAATATTTTTTATAATTATAAAAGGGTATTAAATTTCAAATTC
TTTTTCATTCATTCAATTTTGTAATTATAAAAAAAGGAATCAAATAATTATATATATATA
TAAAAATATAAAAAAAATAAAATGAGAATTTTATATTTAGCTTCTCTTTTATTTTTAATT
ACATTATATCTATCACCAACTTTTGGTTGGGGTGGTGGCAGAGATTGTGAAAGTCATCGT
TCAGAATATACATGTAAATCAGATAGAAGTTGTGCATATTTACCATTTGTATCATGTTGT
GGTAAGAAAGAATTTTTCTGTGTTAATCGTGATCATAGAAATTGTTGTGATGATTTATCA
TGTGCTAAAAACACGAGAACTGGTGAAATCTTTGAGATTTGGTCAAGTTGTAAACCACAT
AGAGATTTTGTACCATATCATTCACCAAATACAACCACATGTGAATCATTAGGTTGTGAA
GCAAGAGGTATGGAATGTGAATGGGTTGAATCATCAXXXXXXXXXX

k*k*kinifynykrvlnfkfffihsil*l*kkesnnyiyi*KYKKNKMRILYLASLLFLI
TLYLSPTFGWGGGRDCESHRSEYTCKSDRSCAYLPFVSCCGKKEFFCVNRDHRNCCDDLS
CAKNTRTGEIFEIWSSCKPHRDFVPYHSPNTTTCESLGCEARGMECEWVES---

Frame A:
k*k*kinifynykrvlnfkfffihsil*l*kkesnnyiyi*KYKKNKMRILYLASLLFLI
TLYLSPTFGWGGGRDCESHRSEYTCKSDRSCAYLPFVSCCGKKEFFCVNRDHRNCCDDLS
CAKNTRTGEIFEIWSSCKPHRDFVPYHSPNTTTCESLGCEARGMECEWVES---


Frame B:
nknkk*iffiiikgy*isnsfsfiqfcnykkrnqiiiyiyknikkik*efyi*llfyf*l
hyiyhqllvgvvaeivkvivqnihvnqievvhiyhlyhvvvrknfsvliviieivvmiyh
vlktrelvkslrfgqvvnhieilyhiihqiqphvnh*vvkqevwnvnglnh---


Frame C:
ikiknkyfl*l*kgikfqilfhsfnfviikkgik*lyiyiki*kk*nenfifsfsfifny
iisitnfwlgwwqrl*kssfriym*ir*klcifticimlw*eriflc*s*s*kll**fim
c*khenw*nl*dlvkl*tt*rfctisftkynhm*iirl*skrygm*mg*ii---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSA149 (SSA149Q) /CSM/SS/SSA1-C/SSA149Q.Seq.d/                        751   0.0
SLG851 (SLG851Q) /CSM/SL/SLG8-C/SLG851Q.Seq.d/                        751   0.0
SLB538 (SLB538Q) /CSM/SL/SLB5-B/SLB538Q.Seq.d/                        751   0.0
SLA438 (SLA438Q) /CSM/SL/SLA4-B/SLA438Q.Seq.d/                        751   0.0
SLA432 (SLA432Q) /CSM/SL/SLA4-B/SLA432Q.Seq.d/                        751   0.0
SLA402 (SLA402Q) /CSM/SL/SLA4-A/SLA402Q.Seq.d/                        751   0.0
SHL109 (SHL109Q) /CSM/SH/SHL1-A/SHL109Q.Seq.d/                        751   0.0
SHJ527 (SHJ527Q) /CSM/SH/SHJ5-B/SHJ527Q.Seq.d/                        751   0.0
SHH249 (SHH249Q) /CSM/SH/SHH2-C/SHH249Q.Seq.d/                        751   0.0
SHF542 (SHF542Q) /CSM/SH/SHF5-B/SHF542Q.Seq.d/                        751   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

D13973|D13973.1 Dictyostelium discoideum DNA for Dp87 protein, complete cds.   577   0.0    3
BX855621|BX855621.4 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH211-225C13.    32   0.041  10
AE014847|AE014847.1 Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete sequence.    32   0.081  8
AC079746|AC079746.2 Homo sapiens chromosome 7 clone CTD-2353O2, WORKING DRAFT SEQUENCE, 19 unordered pieces.    48   0.12   1
AC073320|AC073320.8 Homo sapiens BAC clone RP11-306G20 from 7, complete sequence.    48   0.12   1
AC145891|AC145891.1 Pan troglodytes chromosome UNK clone RP43-20A24, *** SEQUENCING IN PROGRESS ***, 63 unordered pieces.    48   0.12   1
AC084865|AC084865.3 Homo sapiens chromosome 7 clone RP11-437L1, complete sequence.    48   0.12   1
AZ208391|AZ208391.1 SP_0150_A1_B06_T7A Strongylocentrotus purpuratus, purple sea urchin , sperm genomic BAC library Strongylocentrotus purpuratus genomic clone Plate=150 Col=11 Row=C, DNA sequence.    48   0.12   1
AL035475|AL035475.7 Plasmodium falciparum MAL4P2.                  36   0.16   8
BG603433|BG603433.1 EST502523 Plasmodium yoelii sporozoite cDNA Plasmodium yoelii cDNA clone PYCDR54, mRNA sequence.    38   0.19   2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;       280   1e-74
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...   276   2e-73
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...    98   1e-19
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr...    77   3e-13
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...    51   1e-05
B25439(B25439)Beejin protein - slime mold (Dictyostelium discoid...    47   4e-04
(Q6TU45) RecName: Full=Probable spore coat protein sigD; AltName...    45   0.001
AC117076_50(AC117076|pid:none) Dictyostelium discoideum chromoso...    41   0.015
AC117076_49(AC117076|pid:none) Dictyostelium discoideum chromoso...    39   0.076
AB255883_1(AB255883|pid:none) Leucophaea maderae VgR mRNA for vi...    38   0.17

 psg: 0.96  gvh: 0.77  alm: 0.47  top: 0.10  tms: 0.00  mit: 0.32  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: extracellular, including cell wall
	 16.0 %: cytoplasmic
	 12.0 %: endoplasmic reticulum
	  8.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: nuclear

>> prediction for CFD580 is exc

>CFD580F.Seq
AAATAAAAATAAAAAATAAATATTTTTTATAATTATAAAAGGGTATTAAATTTCAAATTC
TTTTTCATTCATTCAATTTTGTAATTATAAAAAAAGGAATCAAATAATTATATATATATA
TAAAAATATAAAAAAAATAAAATGAGAATTTTATATTTAGCTTCTCTTTTATTTTTAATT
ACATTATATCTATCACCAACTTTTGGTTGGGGTGGTGGCAGAGATTGTGAAAGTCATCGT
TCAGAATATACATGTAAATCAGATAGAAGTTGTGCATATTTACCATTTGTATCATGTTGT
GGTAAGAAAGAATTTTTCTGTGTTAATCGTGATCATAGAAATTGTTGTGATGATTTATCA
TGTGCTAAAAACACGAGAACTGGTGAAATCTTTGAGATTTGGTCAAGTTGTAAACCACAT
AGAGATTTTGTACCATATCATTCACCAAATACAACCACATGTGAATCATTAGGTTGTGAA
GCAAGAGGTATGGAATGTGAATGGGTTGAATCATCA----------