>CFC544 (CFC544Q) /CSM/CF/CFC5-B/CFC544Q.Seq.d/
XXXXXXXXXXGATTACCATATAAAGAATTGTAGTGATGGTGATATTTGTTCAACTGATGG
TTGTGATATTGGTTTTGGATGTATTAATTTACCTATAAACTGTGATGATGGAAATTATTG
TACTAAAGATTATTGTGATCCAACATATGGATGTTTACATATCGAAACTGCAAATTGCAC
TGAATGTTTAGAAACAGGTTGTATAACTGTTCTCCCATGTTTCCCAGTAACATGTGACAG
TTTAAATAGTAGCCACTGTGTTGCTAGTGCTATGAATTGCTCAGATAACGATCCATGTAC
ATCAACAGAATGCGTTAATGGAGAATGTACATATGAGTGGATTTGTGGATCAGAAGATTC
ATCATCTGGTGTTGTAGATTCATCATCTGGTGTTGTAGATTCATCATCTGATGTTATTGA
TTCTTCAGATATTATTATTGATTCTTCATCCGATATCCCAATACCAACACTATCACCTTC
CCCTCAACCATCACGTTTCCCAACTGATACACCAACTAATACACCAATGCCACCAACCCG
TCCTCCAACTCCAACTGAAGATCCAAAGATCTATGAAGATCCAGAAGATTTAGATAAAGA
TTGTTTACATTGTAAAGATTTAGGTTGCATACTAACTGGTAAAAG

---YHIKNCSDGDICSTDGCDIGFGCINLPINCDDGNYCTKDYCDPTYGCLHIETANCTE
CLETGCITVLPCFPVTCDSLNSSHCVASAMNCSDNDPCTSTECVNGECTYEWICGSEDSS
SGVVDSSSGVVDSSSDVIDSSDIIIDSSSDIPIPTLSPSPQPSRFPTDTPTNTPMPPTRP
PTPTEDPKIYEDPEDLDKDCLHCKDLGCILTGK

Frame A:
---iti*rivvmvifvqlmvvilvldvliyl*tvmmeiivlkiiviqhmdvyisklqial
nv*kqvv*lfshvsq*hvtv*ivatvllvl*iaqitihvhqqnalmenvhmsgfvdqkih
hlvl*ihhlvl*ihhlmllilqilllilhpisqyqhyhlplnhhvsqlihqlihqchqpv
lqlqlkiqrsmkiqki*ikivyivki*vay*lvk


Frame B:
---lpykel**w*ylfn*wl*ywfwmy*ftykl**wklly*rll*sniwmftyrncklh*
mfrnrlyncspmfpsnm*qfk**plcc*cyellr*rsmyinrmr*wrmyi*vdlwirrfi
iwccrfiiwccrfii*cy*ffryyy*ffirypntntitfpstitfpn*ytn*ytnatnps
snsn*rskdl*rsrrfr*rlftl*rfrlhtnw*k


Frame C:
---YHIKNCSDGDICSTDGCDIGFGCINLPINCDDGNYCTKDYCDPTYGCLHIETANCTE
CLETGCITVLPCFPVTCDSLNSSHCVASAMNCSDNDPCTSTECVNGECTYEWICGSEDSS
SGVVDSSSGVVDSSSDVIDSSDIIIDSSSDIPIPTLSPSPQPSRFPTDTPTNTPMPPTRP
PTPTEDPKIYEDPEDLDKDCLHCKDLGCILTGK

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CHL684 (CHL684Q) /CSM/CH/CHL6-D/CHL684Q.Seq.d/                       1259   0.0
CFI858 (CFI858Q) /CSM/CF/CFI8-C/CFI858Q.Seq.d/                       1259   0.0
CFC544 (CFC544Q) /CSM/CF/CFC5-B/CFC544Q.Seq.d/                       1259   0.0
AFM178 (AFM178Q) /CSM/AF/AFM1-D/AFM178Q.Seq.d/                       1255   0.0
CFH396 (CFH396Q) /CSM/CF/CFH3-D/CFH396Q.Seq.d/                       1253   0.0
AFK842 (AFK842Q) /CSM/AF/AFK8-B/AFK842Q.Seq.d/                       1253   0.0
CFH122 (CFH122Q) /CSM/CF/CFH1-A/CFH122Q.Seq.d/                       1251   0.0
AFJ115 (AFJ115Q) /CSM/AF/AFJ1-A/AFJ115Q.Seq.d/                       1247   0.0
SFE489 (SFE489Q) /CSM/SF/SFE4-D/SFE489Q.Seq.d/                       1243   0.0
CHD256 (CHD256Q) /CSM/CH/CHD2-C/CHD256Q.Seq.d/                       1241   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC023299|AC023299.3 Homo sapiens chromosome 15 clone RP11-640I2 map 15, WORKING DRAFT SEQUENCE, 12 unordered pieces.    34   0.17   5
AC115935|AC115935.5 Mus musculus chromosome 3 clone RP24-545D23 map 3, WORKING DRAFT SEQUENCE, 4 ordered pieces.    34   0.20   7
AC116955|AC116955.2 Dictyostelium discoideum chromosome 2 map 5455881-5481449 strain AX4, complete sequence.    46   0.65   1
X78948|X78948.1 D.minutum ecmB gene.                               46   0.65   1
CG386518|CG386518.1 ZMMBBb0241P02.f ZMMBBb Zea mays subsp. mays genomic clone ZMMBBb0241P02 5', genomic survey sequence.    46   0.65   1
AC027039|AC027039.2 Homo sapiens clone RP11-26N11, WORKING DRAFT SEQUENCE, 17 unordered pieces.    34   1.4    5
BZ502132|BZ502132.1 BONNW52TF BO_1.6_2_KB_tot Brassica oleracea genomic clone BONNW52, DNA sequence.    40   1.6    2
CN230779|CN230779.1 WLB040C07.ab1 WLtestis Gallus gallus cDNA 5', mRNA sequence.    36   3.6    2
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    38   4.4    13
CD218280|BC021250.1 Homo sapiens, clone MGC:29744 IMAGE:3347567, mRNA, complete cds, mRNA sequence.    36   4.5    2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor;                303   4e-81
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;                100   5e-20
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                 98   2e-19
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos...    85   2e-15
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                 83   6e-15
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    83   7e-15
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell...    81   2e-14
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste...    81   2e-14
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    79   8e-14
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                 72   2e-11

 psg: 0.75  gvh: 0.38  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: cytoplasmic
	 24.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for CFC544 is cyt

>CFC544Z.Seq
----------GATTACCATATAAAGAATTGTAGTGATGGTGATATTTGTTCAACTGATGG
TTGTGATATTGGTTTTGGATGTATTAATTTACCTATAAACTGTGATGATGGAAATTATTG
TACTAAAGATTATTGTGATCCAACATATGGATGTTTACATATCGAAACTGCAAATTGCAC
TGAATGTTTAGAAACAGGTTGTATAACTGTTCTCCCATGTTTCCCAGTAACATGTGACAG
TTTAAATAGTAGCCACTGTGTTGCTAGTGCTATGAATTGCTCAGATAACGATCCATGTAC
ATCAACAGAATGCGTTAATGGAGAATGTACATATGAGTGGATTTGTGGATCAGAAGATTC
ATCATCTGGTGTTGTAGATTCATCATCTGGTGTTGTAGATTCATCATCTGATGTTATTGA
TTCTTCAGATATTATTATTGATTCTTCATCCGATATCCCAATACCAACACTATCACCTTC
CCCTCAACCATCACGTTTCCCAACTGATACACCAACTAATACACCAATGCCACCAACCCG
TCCTCCAACTCCAACTGAAGATCCAAAGATCTATGAAGATCCAGAAGATTTAGATAAAGA
TTGTTTACATTGTAAAGATTTAGGTTGCATACTAACTGGTAAAAG