>CFC385 (CFC385Q) /CSM/CF/CFC3-D/CFC385Q.Seq.d/
CTTAAAAGAAGCACTTCATAAAACTGTACCAGTACTTTCAGGTGGTGAATTACAACGTTT
TGCAATTGCTGTTGTTGCAATTCAAAAAGCCGATGTTTATATGTTTGATGAACCATCAAG
TTATCTTGATGTTAAACAAAGATTAAAGGCAGCACAAGTTATTAGAGGTTTAATTCAATC
ACAAAATTATATTATTGTAGTTGAACATGATCTTAGTGTTTTAGATTACTTATCAGATTT
TATTTGTTGTCTTTATGGAGCACCAGGTGCTTATGGTGTTGTAACATTACCATTCTCTGT
TAGAGAAGGTATTAATATTTTCCTTAGTGGTTATATTCACACAGAGAATATGAGATTCCG
TAAGGATGCATTAACCTTTAAATTCTCAGAGACAGCAGAGAATGAAGAAGAGATCAAGAA
ACATTGTAACTACAAATATCCAAATATGACCAAAACAATGGGTACCTTCAAATTGGAAAT
TAAAGCAGGTCAATTCACAGATTCTGAAATCATCGTTATGTTGGGTCAAAACGGTACCGG
TAAGACCACCTTTATCAGAATGTTGGCTGGTCATATGCCATCCGATACTGATGCTCAAGT
TCCAGAGTTGAATGTCAGXXXXXXXXXXATGTCAGTTACAANCCACAAAAANTCGATCCA
AAATTNCCAGGTTCCGTTAGAGAATTGATTAATAAACGTATTTGCAACACTTTCCTTCAT
CNACAATTCCAATCCGATGTNGTTAAACCATTAAACATTGAAAACATCATCGACAATCAA
GTACTCAATTTATCTGGTGGTGAGTTACAACGTGTTGCCATCGTTTTATGTTTAGGTCAA
CCTGCTGATATCTATCTCATTGATGAACCATCCGCTTATTTGGATTCTGAACAACGTATT
ATCGTCTCTAAAGTCATCAANAGATTCATTCTTCACGCTGGTAAATCTGGTTTCATCGTA
GAGCACGATTTCATTATGGCCACTTATTTAGCTGATCGTGTCATCGTTTATGATGGTATT
CCAGGTGTCTCTTGTGTTGCTAATACTCCACAATCTCTCCTCACTGGTATGAACTCTTTC
CTTAAATCTCTCGAAATCACTTTCCGTCGTGATCCATCCAATTTCCGTCCAAGAATTAAC
AAATTAAATTCAATCAAAGATAATGAACAAAAAGCTGCTGGAATTATTTCTTACCTNATA
ATGT

LKEALHKTVPVLSGGELQRFAIAVVAIQKADVYMFDEPSSYLDVKQRLKAAQVIRGLIQS
QNYIIVVEHDLSVLDYLSDFICCLYGAPGAYGVVTLPFSVREGINIFLSGYIHTENMRFR
KDALTFKFSETAENEEEIKKHCNYKYPNMTKTMGTFKLEIKAGQFTDSEIIVMLGQNGTG
KTTFIRMLAGHMPSDTDAQVPELNV---

---VSYXPQKXDPKXPGSVRELINKRICNTFLHXQFQSDVVKPLNIENIIDNQVLNLSGG
ELQRVAIVLCLGQPADIYLIDEPSAYLDSEQRIIVSKVIXRFILHAGKSGFIVEHDFIMA
TYLADRVIVYDGIPGVSCVANTPQSLLTGMNSFLKSLEITFRRDPSNFRPRINKLNSIKD
NEQKAAGIISYLIM

Frame A:
lkrsts*nctstfrw*ittfcnccccnsksrclyv**tikls*c*tkikgstsy*rfnsi
tklyycs*t*s*cfrllirfyllslwstrclwccnitilc*rry*yfp*wlyshreyeip
*gcinl*ilrdsre*rrdqetl*lqiskydqnngylqign*srsihrf*nhryvgskryr
*dhlyqnvgwsyairy*csssrvecq---

---msvtxhkxsiqnxqvplen*linvfatlsfixnsnpmxlnh*tlktsstikysiylv
vsynvlpsfyv*vnllisislmnhpliwilnnvlsslkssxdsfftlvnlvss*stislw
pli*livssfmmvfqvslvllilhnlsslv*tlslnlskslsvvihpisvqeltn*iqsk
imnkkllelfltx*c

Frame B:
LKEALHKTVPVLSGGELQRFAIAVVAIQKADVYMFDEPSSYLDVKQRLKAAQVIRGLIQS
QNYIIVVEHDLSVLDYLSDFICCLYGAPGAYGVVTLPFSVREGINIFLSGYIHTENMRFR
KDALTFKFSETAENEEEIKKHCNYKYPNMTKTMGTFKLEIKAGQFTDSEIIVMLGQNGTG
KTTFIRMLAGHMPSDTDAQVPELNV---

---cqlqxtkxrskixrfr*rid**tylqhfpsstipircx*tikh*khhrqsstqfiww
*vttcchrfmfrstc*ylsh**tirlfgf*ttyyrl*shqxihssrw*iwfhrrarfhyg
hlfs*schrl*wysrcllcc*ystisphwyelfp*isrnhfps*siqfpskn*qikfnqr
**tkscwnyflpxn

Frame C:
*kkhfiklyqyfqvvnynvlqllllqfkkpmficlmnhqvilmlnkd*rqhkllev*fnh
kiill*lnmilvf*ityqilfvvfmehqvlmvl*hyhsllekvlifslvviftqri*dsv
rmh*plnsqrqqrmkkrsrnivttniqi*pkqwvpsnwklkqvnsqilksslcwvktvpv
rpplsecwlvichpilmlkfqs*ms---

---VSYXPQKXDPKXPGSVRELINKRICNTFLHXQFQSDVVKPLNIENIIDNQVLNLSGG
ELQRVAIVLCLGQPADIYLIDEPSAYLDSEQRIIVSKVIXRFILHAGKSGFIVEHDFIMA
TYLADRVIVYDGIPGVSCVANTPQSLLTGMNSFLKSLEITFRRDPSNFRPRINKLNSIKD
NEQKAAGIISYLIM

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CFC385 (CFC385Q) /CSM/CF/CFC3-D/CFC385Q.Seq.d/                       2286   0.0
VFK139 (VFK139Q) /CSM/VF/VFK1-B/VFK139Q.Seq.d/                       1183   0.0
VHE148 (VHE148Q) /CSM/VH/VHE1-B/VHE148Q.Seq.d/                       1070   0.0
VHB384 (VHB384Q) /CSM/VH/VHB3-D/VHB384Q.Seq.d/                       1070   0.0
SFK682 (SFK682Q) /CSM/SF/SFK6-D/SFK682Q.Seq.d/                       1070   0.0
CHR752 (CHR752Q) /CSM/CH/CHR7-C/CHR752Q.Seq.d/                       1070   0.0
CHR192 (CHR192Q) /CSM/CH/CHR1-D/CHR192Q.Seq.d/                       1070   0.0
VHI606 (VHI606Q) /CSM/VH/VHI6-A/VHI606Q.Seq.d/                       1068   0.0
CHM444 (CHM444Q) /CSM/CH/CHM4-B/CHM444Q.Seq.d/                       1068   0.0
VHC726 (VHC726Q) /CSM/VH/VHC7-B/VHC726Q.Seq.d/                       1065   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY077634|AY077634.1 Dictyostelium discoideum RNaseL inhibitor-like protein ABCE.1 gene, complete cds.  1061   0.0    2
AL400489|AL400489.1 T7 end of clone AS0AA022A06 of library AS0AA from strain CLIB 533 of Saccharomyces bayanus.    68   2e-39  5
AX488972|AX488972.1 Sequence 6272 from Patent WO02053728.          66   1e-34  6
AX831598|AX831598.1 Sequence 2318 from Patent WO03072602.          62   5e-33  6
AX820568|AX820568.1 Sequence 2318 from Patent EP1338608.           62   5e-33  6
AX596270|AX596270.1 Sequence 1924 from Patent EP1258494.           62   5e-33  6
AR147511|AR147511.1 Sequence 21 from patent US 6221597.            62   5e-33  6
Z50111|Z50111.1 S.cerevisiae chromosome IV cosmid 6652.            62   7e-30  6
BQ866471|BQ866471.1 QGC8B04.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC8B04, mRNA sequence.    88   2e-29  2
BQ998861|BQ998861.1 QGG20H07.yg.ab1 QG_EFGHJ lettuce serriola Lactuca sativa cDNA clone QGG20H07, mRNA sequence.    88   2e-29  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY077634_1(AY077634|pid:none) Dictyostelium discoideum RNaseL in...   410   0.0
AM467716_1(AM467716|pid:none) Vitis vinifera contig VV78X234292....   297   e-155
AK226939_1(AK226939|pid:none) Arabidopsis thaliana mRNA for RNas...   296   e-154
AP008217_1071(AP008217|pid:none) Oryza sativa (japonica cultivar...   295   e-153
AC157490_5(AC157490|pid:none) Medicago truncatula clone mth2-123...   293   e-152
AY450958_1(AY450958|pid:none) Cercopithecus aethiops RNase L inh...   292   e-151
AB168951_1(AB168951|pid:none) Macaca fascicularis testis cDNA, c...   292   e-151
AK167370_1(AK167370|pid:none) Mus musculus 15 days pregnant adul...   292   e-151
(P61221) RecName: Full=ATP-binding cassette sub-family E member ...   292   e-151
CR860497_1(CR860497|pid:none) Pongo abelii mRNA; cDNA DKFZp469K1...   292   e-151

 psg: 0.87  gvh: 0.44  alm: 0.37  top: 0.43  tms: 0.00  mit: 0.26  mip: 0.04
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: cytoplasmic
	 24.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for CFC385 is cyt

>CFC385F.Seq
CTTAAAAGAAGCACTTCATAAAACTGTACCAGTACTTTCAGGTGGTGAATTACAACGTTT
TGCAATTGCTGTTGTTGCAATTCAAAAAGCCGATGTTTATATGTTTGATGAACCATCAAG
TTATCTTGATGTTAAACAAAGATTAAAGGCAGCACAAGTTATTAGAGGTTTAATTCAATC
ACAAAATTATATTATTGTAGTTGAACATGATCTTAGTGTTTTAGATTACTTATCAGATTT
TATTTGTTGTCTTTATGGAGCACCAGGTGCTTATGGTGTTGTAACATTACCATTCTCTGT
TAGAGAAGGTATTAATATTTTCCTTAGTGGTTATATTCACACAGAGAATATGAGATTCCG
TAAGGATGCATTAACCTTTAAATTCTCAGAGACAGCAGAGAATGAAGAAGAGATCAAGAA
ACATTGTAACTACAAATATCCAAATATGACCAAAACAATGGGTACCTTCAAATTGGAAAT
TAAAGCAGGTCAATTCACAGATTCTGAAATCATCGTTATGTTGGGTCAAAACGGTACCGG
TAAGACCACCTTTATCAGAATGTTGGCTGGTCATATGCCATCCGATACTGATGCTCAAGT
TCCAGAGTTGAATGTCAG----------

>CFC385Z.Seq
----------ATGTCAGTTACAANCCACAAAAANTCGATCCAAAATTNCCAGGTTCCGTT
AGAGAATTGATTAATAAACGTATTTGCAACACTTTCCTTCATCNACAATTCCAATCCGAT
GTNGTTAAACCATTAAACATTGAAAACATCATCGACAATCAAGTACTCAATTTATCTGGT
GGTGAGTTACAACGTGTTGCCATCGTTTTATGTTTAGGTCAACCTGCTGATATCTATCTC
ATTGATGAACCATCCGCTTATTTGGATTCTGAACAACGTATTATCGTCTCTAAAGTCATC
AANAGATTCATTCTTCACGCTGGTAAATCTGGTTTCATCGTAGAGCACGATTTCATTATG
GCCACTTATTTAGCTGATCGTGTCATCGTTTATGATGGTATTCCAGGTGTCTCTTGTGTT
GCTAATACTCCACAATCTCTCCTCACTGGTATGAACTCTTTCCTTAAATCTCTCGAAATC
ACTTTCCGTCGTGATCCATCCAATTTCCGTCCAAGAATTAACAAATTAAATTCAATCAAA
GATAATGAACAAAAAGCTGCTGGAATTATTTCTTACCTNATAATGT

>CFC385P.Seq
CTTAAAAGAAGCACTTCATAAAACTGTACCAGTACTTTCAGGTGGTGAATTACAACGTTT
TGCAATTGCTGTTGTTGCAATTCAAAAAGCCGATGTTTATATGTTTGATGAACCATCAAG
TTATCTTGATGTTAAACAAAGATTAAAGGCAGCACAAGTTATTAGAGGTTTAATTCAATC
ACAAAATTATATTATTGTAGTTGAACATGATCTTAGTGTTTTAGATTACTTATCAGATTT
TATTTGTTGTCTTTATGGAGCACCAGGTGCTTATGGTGTTGTAACATTACCATTCTCTGT
TAGAGAAGGTATTAATATTTTCCTTAGTGGTTATATTCACACAGAGAATATGAGATTCCG
TAAGGATGCATTAACCTTTAAATTCTCAGAGACAGCAGAGAATGAAGAAGAGATCAAGAA
ACATTGTAACTACAAATATCCAAATATGACCAAAACAATGGGTACCTTCAAATTGGAAAT
TAAAGCAGGTCAATTCACAGATTCTGAAATCATCGTTATGTTGGGTCAAAACGGTACCGG
TAAGACCACCTTTATCAGAATGTTGGCTGGTCATATGCCATCCGATACTGATGCTCAAGT
TCCAGAGTTGAATGTCAG----------ATGTCAGTTACAANCCACAAAAANTCGATCCA
AAATTNCCAGGTTCCGTTAGAGAATTGATTAATAAACGTATTTGCAACACTTTCCTTCAT
CNACAATTCCAATCCGATGTNGTTAAACCATTAAACATTGAAAACATCATCGACAATCAA
GTACTCAATTTATCTGGTGGTGAGTTACAACGTGTTGCCATCGTTTTATGTTTAGGTCAA
CCTGCTGATATCTATCTCATTGATGAACCATCCGCTTATTTGGATTCTGAACAACGTATT
ATCGTCTCTAAAGTCATCAANAGATTCATTCTTCACGCTGGTAAATCTGGTTTCATCGTA
GAGCACGATTTCATTATGGCCACTTATTTAGCTGATCGTGTCATCGTTTATGATGGTATT
CCAGGTGTCTCTTGTGTTGCTAATACTCCACAATCTCTCCTCACTGGTATGAACTCTTTC
CTTAAATCTCTCGAAATCACTTTCCGTCGTGATCCATCCAATTTCCGTCCAAGAATTAAC
AAATTAAATTCAATCAAAGATAATGAACAAAAAGCTGCTGGAATTATTTCTTACCTNATA
ATGT