>CFC107 (CFC107Q) /CSM/CF/CFC1-A/CFC107Q.Seq.d/
ACTGTTGGCCTACTGGTAATTATTTAAATAATAAAAATAATAATTAATAATAATAAAAAT
AATANTAACAAATTGAAATTAATAAATNACACCAAAAAAACGTACACACACAAAAATAAT
AATAAAATGAAAAAGACTTTCATATTTTTATACTGNGTGGTTCTTTTTATTXXXXXXXXX
X

tvgllvii*IIKIIINNNKNNXNKLKLINXTKKTYTHKNNNKMKKTFIFLYXVVLF---

Frame A:
tvgllvii*IIKIIINNNKNNXNKLKLINXTKKTYTHKNNNKMKKTFIFLYXVVLF---


Frame B:
llayw*lfk**k**liiikiixtn*n**xtpkkrthtkiiik*krlsyfytxwffl---


Frame C:
cwptgnylnnknnn****k*x*qieinkxhqknvhtqk***nekdfhifilxgsfy---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SLF214 (SLF214Q) /CSM/SL/SLF2-A/SLF214Q.Seq.d/                         80   1e-14
SHL390 (SHL390Q) /CSM/SH/SHL3-D/SHL390Q.Seq.d/                         80   1e-14
SHK283 (SHK283Q) /CSM/SH/SHK2-D/SHK283Q.Seq.d/                         80   1e-14
SHJ448 (SHJ448Q) /CSM/SH/SHJ4-B/SHJ448Q.Seq.d/                         80   1e-14
SHJ323 (SHJ323Q) /CSM/SH/SHJ3-A/SHJ323Q.Seq.d/                         80   1e-14
SHJ195 (SHJ195Q) /CSM/SH/SHJ1-D/SHJ195Q.Seq.d/                         80   1e-14
SHI807 (SHI807Q) /CSM/SH/SHI8-A/SHI807Q.Seq.d/                         80   1e-14
SHH510 (SHH510Q) /CSM/SH/SHH5-A/SHH510Q.Seq.d/                         80   1e-14
SHH122 (SHH122Q) /CSM/SH/SHH1-A/SHH122Q.Seq.d/                         80   1e-14
SHG866 (SHG866Q) /CSM/SH/SHG8-C/SHG866Q.Seq.d/                         80   1e-14

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC009469|AC009469.4 Homo sapiens BAC clone RP11-20N16 from 2, complete sequence.    44   0.63   1
BD186984|BD186984.1 Nucleic acids isolated from neuroblastoma.     42   2.5    1
BD101361|BD101361.1 Novel genes cloned in humanneuroblastoma and fragments thereof.    42   2.5    1
BD021423|BD021423.1 Novel gene and novel gene fragment cloned in human neuroblastoma.    42   2.5    1
U30841|U30841.1 Pisum sativum manganese superoxide dismutase precursor (MnSOD) gene, nuclear gene encoding mitochondrial protein, complete cds.    42   2.5    1
BD099301|BD099301.1 Novel genes cloned in humanneuroblastoma and fragments thereof.    34   4.6    2
BD019363|BD019363.1 Novel gene and novel gene fragment cloned in human neuroblastoma.    34   4.6    2
AC102672|AC102672.5 Mus musculus chromosome 14 clone RP23-181E7 map 14, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.    40   9.8    1
AC125622|AC125622.3 Rattus norvegicus clone CH230-9L1, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.    40   9.8    1
BH244272|BH244272.1 AUISA46TF AUIS Arabidopsis thaliana genomic clone AUISA46, DNA sequence.    40   9.8    1

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3101297
Number of Hits to DB: 128,098,301

 psg: 0.48  gvh: 0.21  alm: 0.51  top: 0.53  tms: 0.00  mit: 0.47  mip: 0.00
 nuc: 0.12  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: nuclear
	 20.0 %: cytoplasmic
	 16.0 %: mitochondrial
	  4.0 %: plasma membrane

>> prediction for CFC107 is nuc

>CFC107F.Seq
ACTGTTGGCCTACTGGTAATTATTTAAATAATAAAAATAATAATTAATAATAATAAAAAT
AATANTAACAAATTGAAATTAATAAATNACACCAAAAAAACGTACACACACAAAAATAAT
AATAAAATGAAAAAGACTTTCATATTTTTATACTGNGTGGTTCTTTTTATT---------
-