>CFB729 (CFB729Q) /CSM/CF/CFB7-B/CFB729Q.Seq.d/
XXXXXXXXXXATCTCAAGTGGTTATTATAAAGATGAGGAGAAAACTAGAGAAGAATTCAA
AGATGGTTGGTTCCATACTGGTGATATTGGTCGTTGGAATCGTGATGGTAGTCTTAGCAT
TGTTGATCGTAAGAAAAATATCTTTAAATTATCTCAAGGTGAATATGTTGCAGTTGAAAA
GATTGAAACAATAGTTGTAAAGAGTGAATACGTTGAACAAGTTTGTATTTATGGTGATTC
TCAAAAATCATGTGTAATTGCAATCATTCATCCACATCCAGAATCATGTAGTGAATGGGC
TGGTTCAAAGAAAACTGATAAAGACATTAAAGAAATTTGTAAAAATCAAGATTTTATCAA
AGTTGTATTGGATGATATAATTAAAAATTGCAAAAAATCTGGTCTTCATGGATTTGAAAT
TCCAAAANC

---SSGYYKDEEKTREEFKDGWFHTGDIGRWNRDGSLSIVDRKKNIFKLSQGEYVAVEKI
ETIVVKSEYVEQVCIYGDSQKSCVIAIIHPHPESCSEWAGSKKTDKDIKEICKNQDFIKV
VLDDIIKNCKKSGLHGFEIPK

Frame A:
---sqvviikmrrkleknskmvgsilvilvvgivmvvlallivrkislnylkvnmlqlkr
lkq*l*rvntlnkfvfmvilknhv*lqsfihiqnhvvnglvqrkliktlkkfvkikilsk
lywmi*lkiaknlvfmdlkfqx


Frame B:
---lkwll*r*gen*rriqrwlvpyw*ywsles*w*s*hc*s*ekyl*iisr*iccs*kd
*nnscke*ir*tslylw*fskimcncnhsstsrim**mgwfken**rh*rnl*ksrfyqs
cig*yn*klqkiwsswi*nskx


Frame C:
---SSGYYKDEEKTREEFKDGWFHTGDIGRWNRDGSLSIVDRKKNIFKLSQGEYVAVEKI
ETIVVKSEYVEQVCIYGDSQKSCVIAIIHPHPESCSEWAGSKKTDKDIKEICKNQDFIKV
VLDDIIKNCKKSGLHGFEIPK

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VFM341 (VFM341Q) /CSM/VF/VFM3-B/VFM341Q.Seq.d/                        827   0.0
CHR758 (CHR758Q) /CSM/CH/CHR7-C/CHR758Q.Seq.d/                        827   0.0
CHG651 (CHG651Q) /CSM/CH/CHG6-C/CHG651Q.Seq.d/                        827   0.0
CHG452 (CHG452Q) /CSM/CH/CHG4-C/CHG452Q.Seq.d/                        827   0.0
CFI593 (CFI593Q) /CSM/CF/CFI5-D/CFI593Q.Seq.d/                        827   0.0
CFB729 (CFB729Q) /CSM/CF/CFB7-B/CFB729Q.Seq.d/                        827   0.0
CFI815 (CFI815Q) /CSM/CF/CFI8-A/CFI815Q.Seq.d/                        819   0.0
AHB382 (AHB382Q) /CSM/AH/AHB3-D/AHB382Q.Seq.d/                        815   0.0
AFE482 (AFE482Q) /CSM/AF/AFE4-D/AFE482Q.Seq.d/                        811   0.0
SFJ522 (SFJ522Q) /CSM/SF/SFJ5-A/SFJ522Q.Seq.d/                        809   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AY196478|AY196478.1 Dictyostelium discoideum fatty acyl-CoA synthetase (fcsA) mRNA, complete cds.    82   2e-30  2
BQ875501|BQ875501.1 QGI8E20.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI8E20, mRNA sequence.    62   1e-12  2
BQ870927|BQ870927.1 QGI10G21.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGI10G21, mRNA sequence.    62   1e-12  2
BU014148|BU014148.1 QGJ6J03.yg.ab1 QG_EFGHJ lettuce serriola Lactuca sativa cDNA clone QGJ6J03, mRNA sequence.    48   1e-08  2
BU723159| (AE003519) CG3961 gene product [Drosophila melanogaster], mRNA sequence.    50   3e-06  2
AL022304|AL022304.1 S.pombe chromosome II cosmid c18H10.           44   6e-06  2
AU010454|AU010454.1 Schizosaccharomyces pombe cDNA, clone spc05909.    44   7e-06  2
AU010407|AU010407.1 Schizosaccharomyces pombe cDNA, clone spc05821.    44   7e-06  2
CF923027|CF923027.1 gmrhRww24-02-SP6_G05_1_035 Soybean root hair subtracted cDNA library gmrhRww24 Glycine max cDNA, mRNA sequence.    60   3e-05  1
BG511003|BG511003.1 sac81c11.y1 Gm-c1072 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1072-1677 5' similar to TR:Q9XIA9 Q9XIA9 PUTATIVE ACYL COA SYNTHETASE. ;, mRNA sequence.    44   3e-05  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC077120_1(BC077120|pid:none) Danio rerio zgc:101071, mRNA (cDNA...   149   3e-35
BC046740_1(BC046740|pid:none) Xenopus laevis similar to fatty ac...   147   8e-35
(P33124) RecName: Full=Long-chain-fatty-acid--CoA ligase 6;     ...   147   1e-34
BC076898_1(BC076898|pid:none) Xenopus tropicalis acyl-CoA synthe...   145   4e-34
AL596127_3(AL596127|pid:none) Mouse DNA sequence from clone RP23...   145   5e-34
AL596127_4(AL596127|pid:none) Mouse DNA sequence from clone RP23...   145   5e-34
AK122384_1(AK122384|pid:none) Mus musculus mRNA for mKIAA0837 pr...   145   5e-34
AK147421_1(AK147421|pid:none) Mus musculus adult male brain UNDE...   145   5e-34
(Q91WC3) RecName: Full=Long-chain-fatty-acid--CoA ligase 6;     ...   145   5e-34
AY167035_1(AY167035|pid:none) Mus musculus long-chain acyl-CoA s...   145   5e-34

 psg: 0.75  gvh: 0.19  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.18  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: nuclear
	 32.0 %: cytoplasmic
	  8.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for CFB729 is nuc

>CFB729Z.Seq
----------ATCTCAAGTGGTTATTATAAAGATGAGGAGAAAACTAGAGAAGAATTCAA
AGATGGTTGGTTCCATACTGGTGATATTGGTCGTTGGAATCGTGATGGTAGTCTTAGCAT
TGTTGATCGTAAGAAAAATATCTTTAAATTATCTCAAGGTGAATATGTTGCAGTTGAAAA
GATTGAAACAATAGTTGTAAAGAGTGAATACGTTGAACAAGTTTGTATTTATGGTGATTC
TCAAAAATCATGTGTAATTGCAATCATTCATCCACATCCAGAATCATGTAGTGAATGGGC
TGGTTCAAAGAAAACTGATAAAGACATTAAAGAAATTTGTAAAAATCAAGATTTTATCAA
AGTTGTATTGGATGATATAATTAAAAATTGCAAAAAATCTGGTCTTCATGGATTTGAAAT
TCCAAAANC