CFB725
Library CF
(Link to library)
Clone ID CFB725
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16399-1
Original site URL
Representative seq. ID CFB725P
(Link to Original site)
Representative DNA sequence
>CFB725 (CFB725Q) /CSM/CF/CFB7-B/CFB725Q.Seq.d/
ATGTCCAAAATTTTTTAATTTTTTTTAAATACATGTTCAAAATTTTTTTTAAATTACCCG
TCCAAACTTCATTAGTGTCAAAATCAAGATCAATTCAATTTAATTATTCAACAAAAAGTA
ATATTAGAAATATGGAACAATACTTACCACAAGCTAAGGAATTTATTTCATTTATTGATA
AATCACCATCACCATATCATGCAGTTCAATACTTTTCAGAGATTTTAAAGAGTAAAGGTT
TCATTCATTTATCAGAGAAACAAATGTGGGATATTCAACCAAATAAAAAATATTTCTTTA
CTCGTAATCAATCATGTATTTCTGCTTTTGCAGTTGGTGGTAAATATAAACCAGGTAATG
GTTTTAATATTGCAGCAGCACATACTGATAGTCCAAATTTTAAAGTTAGACCAGTATCAA
AAGTTGAATCAGTTGGATATCAACAAGTTGGTGTTGAAACATATGGTGGTGGATTATGGT
ATACATGGTTTGATCGTGATTTAACCGTTGCAGGTAGAGTCATTGTXXXXXXXXXXATCA
ACATTGGCACAAGAGGAGAATGTATTGAATGTGATATTATTCGATAATGAAGAGGTTGGC
TCAAGTTCACCACAAGGTGCATGTGCACCATTGATCAATGATACCATTAGTCGTGTCAAT
AGCTCAATGTTTGCATCCACTTGTAAACCACATGAATTAAACAATTTCATTGATTTAACT
TTAAGAAATAGTTTCTTAATCTCTGCTGATATGGCACATGCTATTCATCCAAATTACACA
GCAAATCATGAACCACTTCATAGACCAGCTCTTAATAAAGGTCCAGTAATCAAATATAAT
GCAAATTTACGTTATGCTTCAAATGGTCCAACTAGTTTTGTTATCTTGGATATCTGTAAA
AAGAATGGTATCCCAATTCAAGAATTCCTCGTCAAAAATGATTCACCATGTGGTTCAACA
ATTGGTCCAATCATTTCTGGTACTTATGGTATTAGAACTGTAGATATTGGTAATCCACAA
TTATCAATGCATTCAATTCGTGAAACTTGTGGTGTTGCGATATCACTCAGGTATTATTAA
TTCAAAAATATTTNAACAATTACAAAAT
sequence update 2001. 6. 1
Translated Amino Acid sequence
VQNFLIFFKYMFKIFFKLPVQTSLVSKSRSIQFNYSTKSNIRNMEQYLPQAKEFISFIDK
SPSPYHAVQYFSEILKSKGFIHLSEKQMWDIQPNKKYFFTRNQSCISAFAVGGKYKPGNG
FNIAAAHTDSPNFKVRPVSKVESVGYQQVGVETYGGGLWYTWFDRDLTVAGRVI---

---STLAQEENVLNVILFDNEEVGSSSPQGACAPLINDTISRVNSSMFASTCKPHELNNF
IDLTLRNSFLISADMAHAIHPNYTANHEPLHRPALNKGPVIKYNANLRYASNGPTSFVIL
DICKKNGIPIQEFLVKNDSPCGSTIGPIISGTYGIRTVDIGNPQLSMHSIRETCGVAISL
RYY*fknixtitk


Translated Amino Acid sequence (All Frames)
Frame A:
mskif*fflntcskfflnypsklh*cqnqdqfnliiqqkvileiwnntyhklrnlfhlli
nhhhhimqfntfqrf*rvkvsfiyqrnkcgifnqiknisllvinhvflllqlvvninqvm
vlilqqhilivqilkldqyqklnqldinklvlkhmvvdygihglivi*plqvesl---

---inigtrgeciecdiir**rgwlkfttrcmctidq*yh*scq*lnvcihl*tt*ikqf
h*fnfkk*flnlc*ygtcyssklhsks*tts*tss**rssnqi*ckftlcfkwsn*fcyl
gyl*kewypnsriprqk*ftmwfnnwsnhfwylwy*ncryw*stiinafns*nlwccdit
qvlliqkyxnnyk

Frame B:
cpkffnff*ihvqnff*itrpnfisvkikinsi*lfnkk*y*kygtiltts*giyfiy**
ititiscssilfrdfke*rfhsfiretnvgystk*kiflys*simyfcfcsww*i*tr*w
f*ycssty**skf*s*tsiks*iswistswc*niwwwimvymv*s*fnrcr*shc---

---STLAQEENVLNVILFDNEEVGSSSPQGACAPLINDTISRVNSSMFASTCKPHELNNF
IDLTLRNSFLISADMAHAIHPNYTANHEPLHRPALNKGPVIKYNANLRYASNGPTSFVIL
DICKKNGIPIQEFLVKNDSPCGSTIGPIISGTYGIRTVDIGNPQLSMHSIRETCGVAISL
RYY*fknixtitk

Frame C:
VQNFLIFFKYMFKIFFKLPVQTSLVSKSRSIQFNYSTKSNIRNMEQYLPQAKEFISFIDK
SPSPYHAVQYFSEILKSKGFIHLSEKQMWDIQPNKKYFFTRNQSCISAFAVGGKYKPGNG
FNIAAAHTDSPNFKVRPVSKVESVGYQQVGVETYGGGLWYTWFDRDLTVAGRVI---

---qhwhkrrmy*m*yysimkrlaqvhhkvhvhh*smiplvvsiaqclhplvnhmn*tis
li*l*eivs*slliwhmlfiqitqqimnhfidqllikvq*snimqiyvmlqmvqlvllsw
isvkrmvsqfknssskmihhvvqqlvqsflvlmvlel*ilvihnyqciqfvklvvlryhs
giinskifxqlqn

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

CFB725 (CFB725Q) /CSM/CF/CFB7-B/CFB725Q.Seq.d/ 2032 0.0
CFG366 (CFG366Q) /CSM/CF/CFG3-C/CFG366Q.Seq.d/ 1108 0.0
AFL190 (AFL190Q) /CSM/AF/AFL1-D/AFL190Q.Seq.d/ 1102 0.0
AFL507 (AFL507Q) /CSM/AF/AFL5-A/AFL507Q.Seq.d/ 1098 0.0
AFK435 (AFK435Q) /CSM/AF/AFK4-B/AFK435Q.Seq.d/ 1092 0.0
CFF163 (CFF163Q) /CSM/CF/CFF1-C/CFF163Q.Seq.d/ 1086 0.0
VFI820 (VFI820Q) /CSM/VF/VFI8-A/VFI820Q.Seq.d/ 1082 0.0
SFC625 (SFC625Q) /CSM/SF/SFC6-B/SFC625Q.Seq.d/ 1080 0.0
AFG236 (AFG236Q) /CSM/AF/AFG2-B/AFG236Q.Seq.d/ 1080 0.0
AFD815 (AFD815Q) /CSM/AF/AFD8-A/AFD815Q.Seq.d/ 1080 0.0

own update 2009. 4. 4
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AY133535|AY133535.1 Arabidopsis thaliana At5g60160/f15l12_20 mRNA, complete cds. 64 6e-13 3
AY085075|AY085075.1 Arabidopsis thaliana clone 126533 mRNA, complete sequence. 64 6e-13 3
BX829510|BX829510.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress). 64 7e-13 3
BX831354|BX831354.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS80ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress). 64 7e-13 3
AY045584|AY045584.1 Arabidopsis thaliana AT5g60160/f15l12_20 mRNA, complete cds. 64 8e-13 3
BX831296|BX831296.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress). 64 8e-13 3
BG525546|BG525546.1 51-5 Stevia field grown leaf cDNA Stevia rebaudiana cDNA 5', mRNA sequence. 80 8e-11 1
AB026632|AB026632.1 Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F15L12. 64 7e-10 5
CB259770|CB259770.1 23-E011176-013-009-M05-T7R MPIZ-ADIS-013 Arabidopsis thaliana cDNA clone MPIZp770M059Q 5-PRIME, mRNA sequence. 64 3e-07 2
AV823138|AV823138.1 Arabidopsis thaliana cDNA clone:RAFL05-15-M22, 5'-end. 64 4e-07 2
dna update 2004. 3. 2
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54M70) RecName: Full=Aspartyl aminopeptidase; EC=3.4.... 355 1e-96
AC159446_25(AC159446|pid:none) Trypanosoma brucei chromosome 3 c... 191 3e-47
EU954490_1(EU954490|pid:none) Zea mays clone 1468685 unknown mRNA. 180 7e-44
BT062007_1(BT062007|pid:none) Zea mays full-length cDNA clone ZM... 180 7e-44
CP000592_232(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 179 1e-43
AM494966_233(AM494966|pid:none) Leishmania braziliensis chromoso... 178 3e-43
CR954212_224(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 178 3e-43
AJ720587_1(AJ720587|pid:none) Gallus gallus mRNA for hypothetica... 177 4e-43
AB008271_3(AB008271|pid:none) Arabidopsis thaliana genomic DNA, ... 175 2e-42
AK118814_1(AK118814|pid:none) Arabidopsis thaliana At5g04710 mRN... 175 2e-42
protein update 2009. 5.12
PSORT

psg: 0.75 gvh: 0.53 alm: 0.37 top: 0.53 tms: 0.00 mit: 0.45 mip: 0.08
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

56.0 %: mitochondrial
32.0 %: nuclear
8.0 %: cytoplasmic
4.0 %: cytoskeletal

>> prediction for CFB725 is mit

5' end seq. ID CFB725F
5' end seq.
>CFB725F.Seq
ATGTCCAAAATTTTTTAATTTTTTTTAAATACATGTTCAAAATTTTTTTTAAATTACCCG
TCCAAACTTCATTAGTGTCAAAATCAAGATCAATTCAATTTAATTATTCAACAAAAAGTA
ATATTAGAAATATGGAACAATACTTACCACAAGCTAAGGAATTTATTTCATTTATTGATA
AATCACCATCACCATATCATGCAGTTCAATACTTTTCAGAGATTTTAAAGAGTAAAGGTT
TCATTCATTTATCAGAGAAACAAATGTGGGATATTCAACCAAATAAAAAATATTTCTTTA
CTCGTAATCAATCATGTATTTCTGCTTTTGCAGTTGGTGGTAAATATAAACCAGGTAATG
GTTTTAATATTGCAGCAGCACATACTGATAGTCCAAATTTTAAAGTTAGACCAGTATCAA
AAGTTGAATCAGTTGGATATCAACAAGTTGGTGTTGAAACATATGGTGGTGGATTATGGT
ATACATGGTTTGATCGTGATTTAACCGTTGCAGGTAGAGTCATTGT----------
Length of 5' end seq. 526
3' end seq. ID CFB725Z
3' end seq.
>CFB725Z.Seq
----------ATCAACATTGGCACAAGAGGAGAATGTATTGAATGTGATATTATTCGATA
ATGAAGAGGTTGGCTCAAGTTCACCACAAGGTGCATGTGCACCATTGATCAATGATACCA
TTAGTCGTGTCAATAGCTCAATGTTTGCATCCACTTGTAAACCACATGAATTAAACAATT
TCATTGATTTAACTTTAAGAAATAGTTTCTTAATCTCTGCTGATATGGCACATGCTATTC
ATCCAAATTACACAGCAAATCATGAACCACTTCATAGACCAGCTCTTAATAAAGGTCCAG
TAATCAAATATAATGCAAATTTACGTTATGCTTCAAATGGTCCAACTAGTTTTGTTATCT
TGGATATCTGTAAAAAGAATGGTATCCCAATTCAAGAATTCCTCGTCAAAAATGATTCAC
CATGTGGTTCAACAATTGGTCCAATCATTTCTGGTACTTATGGTATTAGAACTGTAGATA
TTGGTAATCCACAATTATCAATGCATTCAATTCGTGAAACTTGTGGTGTTGCGATATCAC
TCAGGTATTATTAATTCAAAAATATTTNAACAATTACAAAAT
Length of 3' end seq. 572
Connected seq. ID CFB725P
Connected seq.
>CFB725P.Seq
ATGTCCAAAATTTTTTAATTTTTTTTAAATACATGTTCAAAATTTTTTTTAAATTACCCG
TCCAAACTTCATTAGTGTCAAAATCAAGATCAATTCAATTTAATTATTCAACAAAAAGTA
ATATTAGAAATATGGAACAATACTTACCACAAGCTAAGGAATTTATTTCATTTATTGATA
AATCACCATCACCATATCATGCAGTTCAATACTTTTCAGAGATTTTAAAGAGTAAAGGTT
TCATTCATTTATCAGAGAAACAAATGTGGGATATTCAACCAAATAAAAAATATTTCTTTA
CTCGTAATCAATCATGTATTTCTGCTTTTGCAGTTGGTGGTAAATATAAACCAGGTAATG
GTTTTAATATTGCAGCAGCACATACTGATAGTCCAAATTTTAAAGTTAGACCAGTATCAA
AAGTTGAATCAGTTGGATATCAACAAGTTGGTGTTGAAACATATGGTGGTGGATTATGGT
ATACATGGTTTGATCGTGATTTAACCGTTGCAGGTAGAGTCATTGT----------ATCA
ACATTGGCACAAGAGGAGAATGTATTGAATGTGATATTATTCGATAATGAAGAGGTTGGC
TCAAGTTCACCACAAGGTGCATGTGCACCATTGATCAATGATACCATTAGTCGTGTCAAT
AGCTCAATGTTTGCATCCACTTGTAAACCACATGAATTAAACAATTTCATTGATTTAACT
TTAAGAAATAGTTTCTTAATCTCTGCTGATATGGCACATGCTATTCATCCAAATTACACA
GCAAATCATGAACCACTTCATAGACCAGCTCTTAATAAAGGTCCAGTAATCAAATATAAT
GCAAATTTACGTTATGCTTCAAATGGTCCAACTAGTTTTGTTATCTTGGATATCTGTAAA
AAGAATGGTATCCCAATTCAAGAATTCCTCGTCAAAAATGATTCACCATGTGGTTCAACA
ATTGGTCCAATCATTTCTGGTACTTATGGTATTAGAACTGTAGATATTGGTAATCCACAA
TTATCAATGCATTCAATTCGTGAAACTTGTGGTGTTGCGATATCACTCAGGTATTATTAA
TTCAAAAATATTTNAACAATTACAAAAT
Length of connected seq. 1098
Full length Seq ID -
Full length Seq. -
Length of full length seq. -