DK963520 |
Clone id |
TST39A01NGRL0016_M04 |
Library |
TST39 |
Length |
602 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_M04. 5' end sequence. |
Accession |
DK963520 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL922Contig1 |
Sequence |
ATTTACAATTTTGGATGTGAAGAGGGGAAGATGGCGGGTCTAAGAATTTCCCTCTCTCCG GCAGCCCCGCTTGTGGGTCGCCCAGACGGTCATGGGTCTGCCCAGTCTCCAAGGTTTCTG GGTTGCAGAGAGTTCCATCTTTTCTGGCCAGGCCAAAAAGGCAGCAGACACATCCATCAC CGCAACAAAATAGTATGTGCATTGGGTGGTTCTTCTGATGAAGGTATGGCAGTTTTTCCG AAGATAAATGTTGGAGATCCATATAAGCGGCTAGGTATTCCCCGTGATGCTTCTGAAGAA GAAATCCGAGAAGCTTACAAATATCTCATGGCACAGTATGGTTGGCATGATAAAAGCAGG ACTTCCATTGAAACTGCCTATGACAAAATTCTATTGGAGAGTCTGAAGTCTAGGAGGAGC CCCAAAATCGACGTTCAAAAAGCCTTGAGAAATAATTATGCAAAGCTGCCACCCTGGGTT CGCAACTTGTCGAATATATATGATGTTCCTTCTTCAAAAGTAATCTTAATTAGGGCAGCA TTTTTTACTCTCTTGGGAGTATGGAGTGCACTTGATCAGACACAAGGAGGACCAGCATTC CA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9HGN7 |
Definition |
sp|Q9HGN7|SEC63_SCHPO Translocation protein sec63 OS=Schizosaccharomyces pombe |
Align length |
74 |
Score (bit) |
39.3 |
E-value |
0.016 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SI00 |
Definition |
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
133 |
Score (bit) |
140.0 |
E-value |
4.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963520|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_M04, 5' (602 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella paten... 140 4e-32 tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea... 135 2e-30 tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella paten... 129 1e-28 tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella paten... 128 3e-28 tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis... 126 8e-28 tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum... 114 3e-24 tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomit... 111 3e-23 tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor... 107 5e-22 tr|Q0DTD2|Q0DTD2_ORYSJ Os03g0255200 protein OS=Oryza sativa subs... 105 2e-21 tr|B8AKA7|B8AKA7_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea may... 105 2e-21 tr|Q94C78|Q94C78_ARATH Putative uncharacterized protein At3g5114... 104 5e-21 tr|Q9SD32|Q9SD32_ARATH Putative uncharacterized protein F24M12.1... 101 4e-20 tr|B6TKC3|B6TKC3_MAIZE Putative uncharacterized protein OS=Zea m... 99 2e-19 tr|B4FF72|B4FF72_MAIZE Putative uncharacterized protein OS=Zea m... 77 6e-13 tr|Q00SI4|Q00SI4_OSTTA Homology to unknown gene OS=Ostreococcus ... 75 3e-12 tr|A4SA03|A4SA03_OSTLU Predicted protein OS=Ostreococcus lucimar... 72 3e-11 tr|B7K9K5|B7K9K5_9CHRO Heat shock protein DnaJ domain protein OS... 69 3e-10 tr|A8IKQ9|A8IKQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 68 4e-10 tr|Q8DGG9|Q8DGG9_THEEB Tlr2348 protein OS=Thermosynechococcus el... 61 6e-08 tr|Q10Z68|Q10Z68_TRIEI Putative uncharacterized protein OS=Trich... 60 1e-07 tr|Q3M3C6|Q3M3C6_ANAVT Putative uncharacterized protein OS=Anaba... 59 2e-07 tr|A0ZMC6|A0ZMC6_NODSP Putative uncharacterized protein OS=Nodul... 59 3e-07 tr|Q8YS32|Q8YS32_ANASP All3259 protein OS=Anabaena sp. (strain P... 57 6e-07 tr|Q2JL16|Q2JL16_SYNJB Putative uncharacterized protein OS=Synec... 57 8e-07 tr|B7JW09|B7JW09_SYNP8 Heat shock protein DnaJ domain protein OS... 57 1e-06
>tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212552 PE=4 SV=1 Length = 214
Score = 140 bits (354), Expect = 4e-32 Identities = 67/133 (50%), Positives = 94/133 (70%), Gaps = 2/133 (1%) Frame = +1
Query: 208 GSSDEGMA--VFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAY 381 GSSD + VFP++ V DP+KRLG+ +DASEEE+REA YL+ QY H+KSR +IE+AY Sbjct: 6 GSSDVNSSGPVFPRLGVQDPFKRLGVSQDASEEEVREARNYLVEQYNGHEKSREAIESAY 65
Query: 382 DKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGV 561 D I+++S + R++ K+D++ LR + PPWVR + N+ +VPS ++ RAA F LLGV Sbjct: 66 DTIIMQSFRVRKASKMDLKSNLRKKVEESPPWVRGIVNMIEVPSKTIMGQRAALFLLLGV 125
Query: 562 WSALDQTQGGPAF 600 WS + GGPAF Sbjct: 126 WSVFNPANGGPAF 138
>tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 135 bits (340), Expect = 2e-30 Identities = 66/154 (42%), Positives = 102/154 (66%), Gaps = 10/154 (6%) Frame = +1
Query: 169 HIHHRNKIV-------CALGGSSDEGMA---VFPKINVGDPYKRLGIPRDASEEEIREAY 318 H RN+++ CA+ S + VFP++NV DPYKRLG+ + ASEEEI+EA Sbjct: 50 HAQSRNELLIRRLEPRCAMDASFGGRVGHPPVFPRVNVWDPYKRLGVSKYASEEEIQEAR 109
Query: 319 KYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNI 498 +L+ QY H++S SIE A++KI+++S + R+ KI+++ L+ + PPWVR+L N Sbjct: 110 NFLIEQYAGHERSVESIEAAFEKIIMKSFRERKRSKINLKSKLKKKVDESPPWVRSLINF 169
Query: 499 YDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAF 600 +VP S+VI+ RA F ++GVWS ++ ++GGPAF Sbjct: 170 LEVPPSEVIIRRACLFAVIGVWSVMNSSEGGPAF 203
>tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222052 PE=4 SV=1 Length = 262
Score = 129 bits (325), Expect = 1e-28 Identities = 75/175 (42%), Positives = 103/175 (58%), Gaps = 7/175 (4%) Frame = +1
Query: 97 SAQSPRFL--GCREFHLFWPGQKGSRHIHHRNKIVC-----ALGGSSDEGMAVFPKINVG 255 S QS RF R+F L P KG +VC GG+ + VFP+ NV Sbjct: 21 SLQSHRFPTPALRQFGLSQPLPKG---------LVCRAADATFGGAENLKPPVFPRRNVR 71
Query: 256 DPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDV 435 DP+K LG+ DASEEEIREA YL QY H+ SR +IE AY+KI++ S + R++ KI++ Sbjct: 72 DPFKLLGVSPDASEEEIREAKNYLTEQYYGHEYSREAIEAAYEKIIMHSFRVRKASKINL 131
Query: 436 QKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAF 600 + L+ + PPWV+ + N+ +VP+ + RAA F LLGVWS + +GGPAF Sbjct: 132 KTNLKKKVEESPPWVQAILNMVEVPNKTITGQRAALFFLLGVWSVFNPAEGGPAF 186
>tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129803 PE=4 SV=1 Length = 203
Score = 128 bits (321), Expect = 3e-28 Identities = 62/123 (50%), Positives = 85/123 (69%) Frame = +1
Query: 232 VFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKILLESLKS 411 VFP+ NV DP+K LG+ DASEEEIREA YL QY H+ SR +IE AY+KI++ S + Sbjct: 5 VFPRRNVRDPFKLLGLSSDASEEEIREAKNYLTEQYHGHEYSREAIEAAYEKIIMHSYRV 64
Query: 412 RRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSALDQTQGG 591 R++ KI+++ L+ + PPWVR + N+ +VP+ +I RAA F LLGVWS + +GG Sbjct: 65 RKASKINLKTNLKKKVEESPPWVRAILNMVEVPNKTIIGQRAALFFLLGVWSVFNPAEGG 124
Query: 592 PAF 600 PAF Sbjct: 125 PAF 127
>tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017550 PE=4 SV=1 Length = 235
Score = 126 bits (317), Expect = 8e-28 Identities = 63/156 (40%), Positives = 96/156 (61%), Gaps = 5/156 (3%) Frame = +1
Query: 148 PGQKGSRHIHHRNKIV----CALGGSSDEG-MAVFPKINVGDPYKRLGIPRDASEEEIRE 312 P ++ S+ + ++ CA+ G + FP+I V DPYKRLGIP DASEEEI Sbjct: 4 PARENSKKLKANGLVIRGPRCAVDTPYGGGNLTKFPRITVWDPYKRLGIPPDASEEEIWS 63
Query: 313 AYKYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLS 492 + +L+ QY H++S SIE A++KIL+ S +RR KI+++ L+ + PPWV+NL Sbjct: 64 SRNFLLQQYAGHERSEESIEAAFEKILMASFINRRKTKINLKSKLKKKVEESPPWVKNLL 123
Query: 493 NIYDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAF 600 N ++P+++VI R F +G WS ++ +GGPAF Sbjct: 124 NFVELPATEVIFRRLFLFAFMGGWSIINSAEGGPAF 159
>tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum tuberosum PE=2 SV=1 Length = 251
Score = 114 bits (286), Expect = 3e-24 Identities = 54/135 (40%), Positives = 84/135 (62%) Frame = +1
Query: 196 CALGGSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIET 375 CA + + F ++NV DPYKRLGI RDASEEE+ + +L+ QY H++S SIE Sbjct: 41 CATDTAYGGNIPKFSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEA 100
Query: 376 AYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLL 555 A++KIL++S +R+ KI+++ L+ + PPWV+NL + ++P +IL R F + Sbjct: 101 AFEKILMKSFINRKKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLFGFM 160
Query: 556 GVWSALDQTQGGPAF 600 WS ++ + GPAF Sbjct: 161 ACWSVMNSAEAGPAF 175
>tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 270
Score = 112 bits (280), Expect = 2e-23 Identities = 54/129 (41%), Positives = 79/129 (61%) Frame = +1
Query: 214 SDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKIL 393 S E + VFP+ + DPYK LG+ RDASEEEIR A +L+ QY H+ S +IE AY+KI+ Sbjct: 66 SYEHVPVFPRYRIRDPYKLLGVDRDASEEEIRGARNFLIQQYAGHEPSEEAIEGAYEKII 125
Query: 394 LESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSAL 573 ++S + R+ KI+++ L+ + P WV+ L ++VPS +I R FF + WS Sbjct: 126 MKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGCFEVPSMDIISRRLFFFAFIAGWSIA 185
Query: 574 DQTQGGPAF 600 + GPAF Sbjct: 186 TSAENGPAF 194
>tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028047 PE=4 SV=1 Length = 269
Score = 112 bits (279), Expect = 2e-23 Identities = 53/131 (40%), Positives = 79/131 (60%) Frame = +1
Query: 208 GSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDK 387 G S E + VFP+ + DPYK LG+ RDA+EEEIR A +L+ QY H+ S +IE AY+K Sbjct: 63 GFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAIEGAYEK 122
Query: 388 ILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWS 567 I+++S + R+ KI+++ L+ + P WV+ L ++VP +I R FF + WS Sbjct: 123 IIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFAFIAGWS 182
Query: 568 ALDQTQGGPAF 600 + GPAF Sbjct: 183 IATSAENGPAF 193
>tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31181 PE=4 SV=1 Length = 269
Score = 112 bits (279), Expect = 2e-23 Identities = 53/131 (40%), Positives = 79/131 (60%) Frame = +1
Query: 208 GSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDK 387 G S E + VFP+ + DPYK LG+ RDA+EEEIR A +L+ QY H+ S +IE AY+K Sbjct: 63 GFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAIEGAYEK 122
Query: 388 ILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWS 567 I+++S + R+ KI+++ L+ + P WV+ L ++VP +I R FF + WS Sbjct: 123 IIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFAFIAGWS 182
Query: 568 ALDQTQGGPAF 600 + GPAF Sbjct: 183 IATSAENGPAF 193
>tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122486 PE=4 SV=1 Length = 197
Score = 111 bits (278), Expect = 3e-23 Identities = 58/122 (47%), Positives = 74/122 (60%) Frame = +1
Query: 235 FPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKILLESLKSR 414 FP+I DPYK LGI R+A EEE+REA YL +QYG KS SIE AYDKI++E L+ Sbjct: 1 FPRIRERDPYKLLGIHREAGEEEVREARSYLASQYGGDAKSMESIEVAYDKIMMEKLREY 60
Query: 415 RSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSALDQTQGGP 594 + + K + LP W + + +Y VP+ I+ RA F+ LLGVWS L Q GP Sbjct: 61 QKSQF---KPKKKEIKPLPAWQQKIVGMYQVPNKDDIIKRAVFYALLGVWSVLKPGQRGP 117
Query: 595 AF 600 AF Sbjct: 118 AF 119
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