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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963502
Clone id TST39A01NGRL0016_L10
Library
Length 654
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_L10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GAAAGAGAGAGAGAGAGAGAGAGAGAGAGCAAATGAAGAAGCCTGCAAGCATATTAGTAC
TGGCATGGGGCTGCGGTTTGGGGTTGATATTGATGATGGGAGGAGCGTCCGCAGCTTTTG
TAGAGCGGATAACCTGCTACCTGCAGTACGATGACAACGCCACCTCCGTTGTCTCAGCCA
ACCACGACGAGAGGGTAATGCTGGCGGAGGCGCCTTTCACACAAGGGCCCTCCAACACCT
CCCGCCTTTTGGGCCGCCTTCAAATGGCCGTTTTCGAGCAGCCCTATGAGGACTCCGTTA
TCTCTGTTGCCCAGATTTTCACAGCAACCTTTGACTCTACTCTTTATAGAGGTGTCATTG
CCATCCTTGGTCAACAGCTGCTCAAACCTAGAGGATTTGAGCTGGCAGTAGTTGGAGGCA
CTGGTCGCTTTCGACTTGCTCGCGGTTTTGTTATTGTTAGAGCATCTCCTGTTGTTGACA
ATGAAAGCTATTATGCAAGTATGGAATTTAACCTCTACCGCTAGACAAGGGAATTCCTTC
ATGTCTATTCCAACCATGAAGGTCATTTGGCTTTTTTATGATGAATATTTTTTAGATGGC
CTAAATAGGAAGTTCGAAATCTTTTGCCCAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P13240
Definition sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum
Align length 111
Score (bit) 39.3
E-value 0.017
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963502|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_L10, 5'
         (629 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13240|DR206_PEA Disease resistance response protein 206 OS=P...    39   0.017
sp|Q8B121|GLYC_LATVB Pre-glycoprotein polyprotein GP complex OS=...    30   7.8  

>sp|P13240|DR206_PEA Disease resistance response protein 206
           OS=Pisum sativum GN=PI206 PE=2 SV=2
          Length = 184

 Score = 39.3 bits (90), Expect = 0.017
 Identities = 27/111 (24%), Positives = 54/111 (48%)
 Frame = +3

Query: 162 TSVVSANHDERVMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDST 341
           T +   +H   +++ + P T   S +S+ +GR Q   +    +++  S    FT   +ST
Sbjct: 65  TKLAPQSHFGNIIVFDDPITLSHSLSSKQVGRAQ-GFYIYDTKNTYTSWLS-FTFVLNST 122

Query: 342 LYRGVIAILGQQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYY 494
            ++G I   G   +  +  +++V GGTG F + RG   +  +   + E+Y+
Sbjct: 123 HHQGTITFAGADPIVAKTRDISVTGGTGDFFMHRGIATI-TTDAFEGEAYF 172


>sp|Q8B121|GLYC_LATVB Pre-glycoprotein polyprotein GP complex
           OS=Latino virus (isolate Rat/Bolivia/MARU 1924/1965)
           GN=GPC PE=1 SV=1
          Length = 515

 Score = 30.4 bits (67), Expect = 7.8
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -1

Query: 353 TSIKSRVKGCCENLGNRDNGVLIGLLENGHLKAAQKAGGVGGPLCERR 210
           T+I   V  C +N+   + GVL  LLE  HL  ++    +   +CER+
Sbjct: 126 TNIHHNVTNCVQNISEHE-GVLKWLLETMHLSISKPGKHIAPVMCERQ 172
tr_hit_id Q9FIG6
Definition tr|Q9FIG6|Q9FIG6_ARATH Similarity to disease resistance response protein (At5g42510) OS=Arabidopsis thaliana
Align length 109
Score (bit) 56.6
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963502|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_L10, 5'
         (629 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FIG6|Q9FIG6_ARATH Similarity to disease resistance response...    57   1e-06
tr|A6YQZ6|A6YQZ6_PICSI Dirigent-like protein OS=Picea sitchensis...    56   2e-06
tr|Q27J95|Q27J95_PICSI Dirigent-like protein pDIR17 OS=Picea sit...    55   3e-06
tr|Q2QX08|Q2QX08_ORYSJ Os12g0174700 protein OS=Oryza sativa subs...    54   6e-06
tr|B6TW62|B6TW62_MAIZE Disease resistance response protein 206 O...    54   6e-06
tr|Q27JA0|Q27JA0_PICGL Dirigent-like protein pDIR12 OS=Picea gla...    54   8e-06
tr|A9PCN5|A9PCN5_POPTR Putative uncharacterized protein OS=Popul...    54   8e-06
tr|Q27JB1|Q27JB1_PICGL Dirigent-like protein pDIR1 OS=Picea glau...    54   1e-05
tr|Q27JA9|Q27JA9_9CONI Dirigent-like protein pDIR3 OS=Picea enge...    54   1e-05
tr|Q27JA5|Q27JA5_PICGL Dirigent-like protein pDIR7 OS=Picea glau...    54   1e-05
tr|A9PD67|A9PD67_POPTR Putative uncharacterized protein OS=Popul...    54   1e-05
tr|A2ZIK4|A2ZIK4_ORYSI Putative uncharacterized protein OS=Oryza...    54   1e-05
tr|Q9FIG7|Q9FIG7_ARATH Disease resistance response protein-like ...    53   2e-05
tr|B6TFK6|B6TFK6_MAIZE Disease resistance response protein 206 O...    52   2e-05
tr|A6YQZ7|A6YQZ7_PICSI Dirigent-like protein OS=Picea sitchensis...    52   2e-05
tr|Q27J98|Q27J98_9CONI Dirigent-like protein pDIR14 OS=Picea eng...    52   3e-05
tr|Q1KPV7|Q1KPV7_9CARY Dirigent-related protein OS=Tamarix andro...    52   4e-05
tr|A5BPG0|A5BPG0_VITVI Putative uncharacterized protein OS=Vitis...    51   7e-05
tr|A7P024|A7P024_VITVI Chromosome chr6 scaffold_3, whole genome ...    50   1e-04
tr|Q27JA3|Q27JA3_9CONI Dirigent-like protein pDIR9 OS=Picea enge...    50   1e-04
tr|Q67YM6|Q67YM6_ARATH Putative disease resistance response prot...    49   2e-04
tr|O23132|O23132_ARATH Putative uncharacterized protein F19G10.1...    49   2e-04
tr|A7PW08|A7PW08_VITVI Chromosome chr8 scaffold_34, whole genome...    49   2e-04
tr|A7PW03|A7PW03_VITVI Chromosome chr8 scaffold_34, whole genome...    49   2e-04
tr|A7NTK4|A7NTK4_VITVI Chromosome chr18 scaffold_1, whole genome...    49   2e-04
tr|Q53NQ9|Q53NQ9_ORYSJ Disease resistance-responsive family prot...    49   2e-04
tr|Q53NP4|Q53NP4_ORYSJ Dirigent-like protein OS=Oryza sativa sub...    49   2e-04
tr|Q27JA8|Q27JA8_9CONI Dirigent-like protein pDIR4 (Fragment) OS...    49   2e-04
tr|B6TQI8|B6TQI8_MAIZE Dirigent-like protein pDIR9 OS=Zea mays P...    49   2e-04
tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome ...    49   2e-04

>tr|Q9FIG6|Q9FIG6_ARATH Similarity to disease resistance response
           protein (At5g42510) OS=Arabidopsis thaliana GN=At5g42510
           PE=2 SV=1
          Length = 182

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
 Frame = +3

Query: 195 VMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDSTLYRG-VIAILG 371
           +M+A+ P T+GP  +S+ +GR Q        +D V ++  +F   F +  + G  IA+ G
Sbjct: 76  IMIADDPLTEGPDPSSKEVGRAQGMYASTAMKDIVFTM--VFNYVFTAGEFNGSTIAVYG 133

Query: 372 QQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYYASMEFNLY 518
           +  +  +  EL ++GGTG FR ARG+ + +   +V  +   A +E+N++
Sbjct: 134 RNDIFSKVRELPIIGGTGAFRFARGYALPKTYKIVGLD---AVVEYNVF 179


>tr|A6YQZ6|A6YQZ6_PICSI Dirigent-like protein OS=Picea sitchensis
           PE=2 SV=1
          Length = 186

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = +3

Query: 162 TSVVSANHDERVMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDST 341
           TS  SA     VM+ +   T+GP  TS++LGR Q        E+  + +A  F   F+S 
Sbjct: 66  TSNSSATLFGTVMVMDDWLTEGPEATSKMLGRAQGIYVSSSQENFHLLMASTFV--FESG 123

Query: 342 LYRG-VIAILGQQLLKPRGFELAVVGGTGRFRLARGFVIVR 461
            Y G  +A++G+     +  E+ +VGG+G FRLARG+ + R
Sbjct: 124 KYNGSTLAMIGKNAALEQVREMPIVGGSGLFRLARGYALAR 164


>tr|Q27J95|Q27J95_PICSI Dirigent-like protein pDIR17 OS=Picea
           sitchensis PE=2 SV=1
          Length = 178

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
 Frame = +3

Query: 159 ATSVVSANHDERVMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDS 338
           + +V SA     V++ + P T+GP+ TS+LLGR Q        E  V+ +  + T  F +
Sbjct: 57  SANVTSATGFGGVVVLDDPLTEGPNVTSKLLGRAQGLYAGVGQEQHVLLM--VLTFVFQT 114

Query: 339 TLYRG-VIAILGQQLLKPRGFELAVVGGTGRFRLARGFVIVR 461
             Y G  + ++G  ++  +  EL +VGG+G FRLARG+ +++
Sbjct: 115 GEYNGSTLTMVGNDVIFNKVRELPIVGGSGVFRLARGYALLQ 156


>tr|Q2QX08|Q2QX08_ORYSJ Os12g0174700 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0174700 PE=4 SV=1
          Length = 184

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = +3

Query: 159 ATSVVSANHDERVMLAEAPFTQGPS-NTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFD 335
           AT+  SA+    V++ + P T GP  N S  +GR Q   +    +D+V  +  +    F 
Sbjct: 63  ATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQ-GTYVSAGKDTVALLMNM-NFVFQ 120

Query: 336 STLYRG-VIAILGQQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYYASMEFN 512
           S  Y G  +AI+G+  +     E+AVVGGTG FR ARG+   R +  +D ++  A++E+N
Sbjct: 121 SGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQAR-THTLDMKTGDATVEYN 179

Query: 513 LY 518
           LY
Sbjct: 180 LY 181


>tr|B6TW62|B6TW62_MAIZE Disease resistance response protein 206
           OS=Zea mays PE=2 SV=1
          Length = 176

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
 Frame = +3

Query: 195 VMLAEAPFTQGPS-NTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDSTLYRG-VIAIL 368
           V++ + P T+GP   +S+ LGR Q        ++  + ++  F   F +  Y G  +AI+
Sbjct: 67  VVVIDDPLTEGPDLKSSKPLGRAQGTYIGAGKDELSLMMSMNFV--FQAGKYNGSTVAIM 124

Query: 369 GQQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYYASMEFNLY 518
           G+  +     E+AVVGGTG FR+ARG+   R +  +D  +  A++E+NLY
Sbjct: 125 GRNAVFDAVREMAVVGGTGAFRMARGYAQAR-THALDLNTGDATVEYNLY 173


>tr|Q27JA0|Q27JA0_PICGL Dirigent-like protein pDIR12 OS=Picea glauca
           PE=2 SV=1
          Length = 184

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = +3

Query: 195 VMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDSTLYRG-VIAILG 371
           V++ +   T+GP  TS+++GR Q        E+  + +A  F   F+S  Y G  +A++G
Sbjct: 77  VVVMDDCLTEGPEVTSKVVGRAQGIYVSSSQENFHLLMASTFV--FESGKYNGSTLAMIG 134

Query: 372 QQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYYASMEFNL 515
           +        E+ +VGG+G FRLARG+ + R   +   +S  A +E+N+
Sbjct: 135 KNAALEEVREMPIVGGSGLFRLARGYALARTHSI---DSTTAVVEYNV 179


>tr|A9PCN5|A9PCN5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 157

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
 Frame = +3

Query: 195 VMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDSTLYRG-VIAILG 371
           V + + P T GP  +SR++G+ Q    +   +D  + +A  F   F    Y G  I +LG
Sbjct: 48  VRMIDNPLTLGPEMSSRMVGKAQGFYAQASQQDLGLLMAMNFA--FIEGKYNGSTITVLG 105

Query: 372 QQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYYASMEFNLY 518
           +  +     E+ V+GG+G FR ARG+V  R + +VD ++  A++E+N+Y
Sbjct: 106 RNEVFSTVREMPVIGGSGLFRFARGYVQAR-THMVDLKTGDATVEYNVY 153


>tr|Q27JB1|Q27JB1_PICGL Dirigent-like protein pDIR1 OS=Picea glauca
           PE=2 SV=1
          Length = 186

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = +3

Query: 162 TSVVSANHDERVMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDST 341
           TS  SA     VM+ +   T+ P  TS++LGR Q        E+  + +A  F   F+S 
Sbjct: 66  TSNSSATLFGTVMVMDDWLTEEPEATSKMLGRAQGIYVSSSQENFHLLMASTFV--FESG 123

Query: 342 LYRG-VIAILGQQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYYASMEFNL 515
            Y G  +A++G+     +  E+ +VGG+G FRLARG+ + R   +  N    A +E+N+
Sbjct: 124 KYNGSTLAMIGKNAALEQVREMPIVGGSGLFRLARGYALARTHSLELNTG-NAVVEYNV 181


>tr|Q27JA9|Q27JA9_9CONI Dirigent-like protein pDIR3 OS=Picea
           engelmannii x Picea glauca PE=2 SV=1
          Length = 188

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = +3

Query: 195 VMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDSTLYRG-VIAILG 371
           VM+ +   T+GP+ TS+++GR Q        E   + +A  F   F+S  Y G  +A++G
Sbjct: 79  VMVMDDWLTEGPAATSKMVGRAQGIYVSSSQEKFHLLMASTFV--FESGKYNGSTLAMVG 136

Query: 372 QQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYYASMEFNL 515
           +     +  E+ +VGG+G FRLARG+ + R   +  N    A +E+N+
Sbjct: 137 KNAALEQVREMPIVGGSGLFRLARGYALARTHSLELNTG-NAVVEYNV 183


>tr|Q27JA5|Q27JA5_PICGL Dirigent-like protein pDIR7 OS=Picea glauca
           PE=2 SV=1
          Length = 188

 Score = 53.5 bits (127), Expect = 1e-05
 Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
 Frame = +3

Query: 195 VMLAEAPFTQGPSNTSRLLGRLQMAVFEQPYEDSVISVAQIFTATFDSTLYRG-VIAILG 371
           VM+ +   T+GP+ TS+++GR Q        E   + +A  F   F+S  Y G  +A++G
Sbjct: 79  VMVMDDWLTEGPAATSKMVGRAQGIYVSSSQEKFHLLMASTFV--FESGKYNGSTLAMVG 136

Query: 372 QQLLKPRGFELAVVGGTGRFRLARGFVIVRASPVVDNESYYASMEFNL 515
           +     +  E+ +VGG+G FRLARG+ + R   +  N    A +E+N+
Sbjct: 137 KNAALEQVREMPIVGGSGLFRLARGYALARTHSLELNTG-NAVVEYNV 183