DK963498 |
Clone id |
TST39A01NGRL0016_L06 |
Library |
TST39 |
Length |
627 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_L06. 5' end sequence. |
Accession |
DK963498 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CGGATATATTCTCTACATGGAAGAGGTTTTGCAAAGCTTCTTAATGGGCCCCTGGGAAAA TGTGAATTTCAGAAAGCAGTGGCGCAAAAAGCTTGAGCAGACATCGTCCTTTTGTGATGT AAAGGCTTCTCTGCTTGATCTGGAGGCAAATCTACGCTCTGTGGTTCTTGTAGAGGATTG GTCAATATGTCTGGAGGATGCTCCCTCCATGGTACTAGGACGGTCTGTCACTTCTTGCGA AGACGATTCGCTTTCCAAGAAAGCATCTGGCAAAAGAAGCTCTCGAAGGTCTGGTGCTTC TAGACGAGGCCTGCCCAAAAGTGGCAAGACAACTTTGGGGAATGTGCAATGGATTCGTCG CGGGAAGCTTGCACACAGAGTAGCAGGTTGGGCTACCTTGTGCACCAAAGTGGCCAGAAA AGCTGCAAGACAAGGTGGGATCAAGAGTATCACAGGAATTACTTATGTTGACAGTGAGGA AGTACCAAGGCGTAGTAAACAAACTGCCTGGCGTGCAAGAGTCCAAGCAGCATGTACCGT TGCGGAGCTTGCTGTTCAGGTTCGCTGTCTGGATTCTCTGCTTCGATGGGACAACCTGCT TTCAAAGTCAGAGGTGCATGCAACTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9W0T1 |
Definition |
sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila melanogaster |
Align length |
69 |
Score (bit) |
39.3 |
E-value |
0.016 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PQK3 |
Definition |
tr|A7PQK3|A7PQK3_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
199 |
Score (bit) |
120.0 |
E-value |
5.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963498|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_L06, 5' (614 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PQK3|A7PQK3_VITVI Chromosome chr6 scaffold_25, whole genome... 120 5e-26 tr|A7PQX5|A7PQX5_VITVI Chromosome chr6 scaffold_25, whole genome... 109 1e-22 tr|Q9FNI5|Q9FNI5_ARATH Gb|AAC80581.1 OS=Arabidopsis thaliana PE=... 101 4e-20 tr|Q94CK2|Q94CK2_ARATH Putative uncharacterized protein At5g1240... 96 2e-18 tr|Q53PX0|Q53PX0_ORYSJ PHD-finger family protein, expressed OS=O... 94 5e-18 tr|Q0IUL9|Q0IUL9_ORYSJ Os11g0148700 protein OS=Oryza sativa subs... 94 5e-18 tr|B8BJ40|B8BJ40_ORYSI Putative uncharacterized protein OS=Oryza... 93 1e-17 tr|Q69Q09|Q69Q09_ORYSJ PHD finger transcription factor-like prot... 90 9e-17 tr|Q0D3X1|Q0D3X1_ORYSJ Os07g0661500 protein OS=Oryza sativa subs... 90 9e-17 tr|A3BN35|A3BN35_ORYSJ Putative uncharacterized protein OS=Oryza... 90 9e-17 tr|A2YPL6|A2YPL6_ORYSI Putative uncharacterized protein OS=Oryza... 88 5e-16 tr|Q9LHR7|Q9LHR7_ARATH Genomic DNA, chromosome 5, TAC clone:K3D2... 87 8e-16 tr|A5BHB3|A5BHB3_VITVI Putative uncharacterized protein OS=Vitis... 77 6e-13 tr|Q3E8P3|Q3E8P3_ARATH Uncharacterized protein At5g35210.1 OS=Ar... 75 2e-12 tr|A7QJR4|A7QJR4_VITVI Chromosome undetermined scaffold_107, who... 54 7e-06 tr|A5CAP1|A5CAP1_VITVI Putative uncharacterized protein OS=Vitis... 52 4e-05 tr|B7QLX5|B7QLX5_IXOSC Fetal alzheimer antigen, putative OS=Ixod... 50 1e-04 tr|Q8K092|Q8K092_MOUSE Bptf protein (Fragment) OS=Mus musculus G... 39 0.24 tr|Q3UPA6|Q3UPA6_MOUSE Putative uncharacterized protein (Fragmen... 39 0.24 tr|A2A655|A2A655_MOUSE Bromodomain PHD finger transcription fact... 39 0.24 tr|A2A654|A2A654_MOUSE Bromodomain PHD finger transcription fact... 39 0.24 tr|B4QKV1|B4QKV1_DROSI GD13529 OS=Drosophila simulans GN=GD13529... 39 0.24 tr|B4PC37|B4PC37_DROYA GE21036 OS=Drosophila yakuba GN=GE21036 P... 39 0.24 tr|B4HVD4|B4HVD4_DROSE GM14291 OS=Drosophila sechellia GN=GM1429... 39 0.24 tr|B3NEM5|B3NEM5_DROER GG14675 OS=Drosophila erecta GN=GG14675 P... 39 0.24 tr|A1C8V3|A1C8V3_ASPCL DUF1275 domain protein OS=Aspergillus cla... 39 0.24 tr|B4MN95|B4MN95_DROWI GK17657 OS=Drosophila willistoni GN=GK176... 39 0.31 tr|B3M8I2|B3M8I2_DROAN GF24755 OS=Drosophila ananassae GN=GF2475... 38 0.41 tr|Q29ES7|Q29ES7_DROPS GA16840 OS=Drosophila pseudoobscura pseud... 38 0.54 tr|B4H5F5|B4H5F5_DROPE GL16133 OS=Drosophila persimilis GN=GL161... 38 0.54
>tr|A7PQK3|A7PQK3_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022100001 PE=4 SV=1 Length = 1591
Score = 120 bits (302), Expect = 5e-26 Identities = 68/199 (34%), Positives = 104/199 (52%) Frame = +2
Query: 5 YILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWS 184 YILYMEE L ++GP+ + RKQWR+++EQ S++ +KA LL+LE N+R + L DW Sbjct: 768 YILYMEESLSGLVVGPFLSATCRKQWRRRVEQASTYSVIKALLLELEENIRIIALSGDWV 827
Query: 185 ICLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGKTTLGNVQWIRRG 364 +++ ++ SVT + + W R G Sbjct: 828 KLVDN---WLVEASVTQSATSAIGSTQKRGPGRRSKRLSGVSEVADDRCLDKDFTWWRGG 884
Query: 365 KLAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTVA 544 KL+ + L +KAARQGG + I GI Y + E+P+RS+Q WRA V+ + + Sbjct: 885 KLSKHIFQRGILPRSAVKKAARQGGSRKIPGICYAEVSEIPKRSRQVIWRAAVEMSKNAS 944
Query: 545 ELAVQVRCLDSLLRWDNLL 601 +LA+QVR LD +RW +L+ Sbjct: 945 QLALQVRYLDLHIRWGDLV 963
>tr|A7PQX5|A7PQX5_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022235001 PE=4 SV=1 Length = 1604
Score = 109 bits (272), Expect = 1e-22 Identities = 67/198 (33%), Positives = 95/198 (47%) Frame = +2
Query: 5 YILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWS 184 YIL +E L+ LMGPW N + K W K + S VK LL LE+NLR + L DW Sbjct: 782 YILSIEVRLRGLLMGPWMNPHHAKLWCKNALKASDVASVKHLLLTLESNLRRLALSADW- 840
Query: 185 ICLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGKTTLGNVQWIRRG 364 L+ S + S + P S T ++ W R G Sbjct: 841 --LKQMDSFITMGSASHIVISSRASSKLGVGKKRTRCSGFVSKPSSNAATGLSLFWWRGG 898
Query: 365 KLAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTVA 544 +L+ ++ W L +A KAARQ G I GI Y +S E +R+K WR+ V+ + +V Sbjct: 899 RLSRKLFNWKVLPRSLASKAARQAGCTKIPGILYPESSEFAKRNKYVVWRSAVETSTSVE 958
Query: 545 ELAVQVRCLDSLLRWDNL 598 +LA+ VR LD +RWD++ Sbjct: 959 QLALLVRELDLNIRWDDI 976
>tr|Q9FNI5|Q9FNI5_ARATH Gb|AAC80581.1 OS=Arabidopsis thaliana PE=4 SV=1 Length = 1516
Score = 101 bits (251), Expect = 4e-20 Identities = 62/199 (31%), Positives = 99/199 (49%) Frame = +2
Query: 5 YILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWS 184 Y LY+EE L+ + GP+ + + R QWRKKLE+ S+ +KA LL+LE N+ S+ L DW Sbjct: 759 YALYLEESLRGLIAGPFLSESLRYQWRKKLEEASTCKAMKALLLELEENICSIALSSDWL 818
Query: 185 ICLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGKTTLGNVQWIRRG 364 ++D ++ S+ + + W R G Sbjct: 819 KLMDD---WLIELSIFQSAPVTVGATQKRRPGRRKQRNQAENTAQGSDDD--SFTWWRGG 873
Query: 365 KLAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTVA 544 KL+ + A L +KAA QGG K Y D +P+RS+++ W+A V+++ ++ Sbjct: 874 KLSKIILLKAVLSKPKIKKAAWQGGTKKFPEFNYGDGSYIPKRSRRSIWKAAVESSKNIS 933
Query: 545 ELAVQVRCLDSLLRWDNLL 601 +LA+QVR LD +RW L+ Sbjct: 934 QLALQVRYLDMNIRWSELV 952
>tr|Q94CK2|Q94CK2_ARATH Putative uncharacterized protein At5g12400 OS=Arabidopsis thaliana GN=At5g12400 PE=2 SV=1 Length = 1595
Score = 95.9 bits (237), Expect = 2e-18 Identities = 60/197 (30%), Positives = 97/197 (49%) Frame = +2
Query: 8 ILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWSI 187 IL +E LQ L+GPW N WR+ + + S+ +K L+D ANL VL +W Sbjct: 999 ILSLESRLQGLLVGPWLNPQHSSFWREHILKASNISSLKHLLVD--ANLHHRVLSLEWLS 1056
Query: 188 CLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGKTTLGNVQWIRRGK 367 ++ A +V+G ++ P + K + W R G+ Sbjct: 1057 HVDAA--VVMGSAIHILIASTRSWSKTAIGKRRGTLLDSGVNPTAKKNGGLTMCWWRGGQ 1114
Query: 368 LAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTVAE 547 L+ R+ W L + KAARQGG +I GI Y ++ E +RS++ AW A V+++ T + Sbjct: 1115 LSRRLFNWKVLPRALISKAARQGGSMNIPGIFYPENSESAKRSRRVAWEAAVESSTTSEQ 1174
Query: 548 LAVQVRCLDSLLRWDNL 598 L +Q+R L S ++WD++ Sbjct: 1175 LGLQIRTLQSYIKWDDI 1191
>tr|Q53PX0|Q53PX0_ORYSJ PHD-finger family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g05130 PE=4 SV=1 Length = 1884
Score = 94.4 bits (233), Expect = 5e-18 Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 1/200 (0%) Frame = +2
Query: 5 YILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWS 184 Y+ +MEE L+ L+G ++V R+QW +L+ S+ ++ LL+LE+N+R V W Sbjct: 994 YLSHMEESLRGLLVGSLQDVQRRQQWYNQLKDASNCGNIIPLLLELESNIRGVAFSTSWL 1053
Query: 185 ICLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGK-TTLGNVQWIRR 361 ++D P S + P + + V W Sbjct: 1054 KLIDDWPVESPSASAGASRPAAYQKRGTGGRRGRKRSMASESAPVTDDDNSWKEVNWWSG 1113
Query: 362 GKLAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTV 541 G ++ R+ L RKAARQGG K + ++Y + PRR++Q AWRA V + + Sbjct: 1114 GNVSKRILQRGALPILTIRKAARQGGKKRMFSVSYHEGSNFPRRTRQLAWRACVGLSQSS 1173
Query: 542 AELAVQVRCLDSLLRWDNLL 601 ++LA+QVR LDS +RW + Sbjct: 1174 SQLALQVRYLDSHIRWKEFI 1193
>tr|Q0IUL9|Q0IUL9_ORYSJ Os11g0148700 protein OS=Oryza sativa subsp. japonica GN=Os11g0148700 PE=4 SV=1 Length = 951
Score = 94.4 bits (233), Expect = 5e-18 Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 1/200 (0%) Frame = +2
Query: 5 YILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWS 184 Y+ +MEE L+ L+G ++V R+QW +L+ S+ ++ LL+LE+N+R V W Sbjct: 61 YLSHMEESLRGLLVGSLQDVQRRQQWYNQLKDASNCGNIIPLLLELESNIRGVAFSTSWL 120
Query: 185 ICLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGK-TTLGNVQWIRR 361 ++D P S + P + + V W Sbjct: 121 KLIDDWPVESPSASAGASRPAAYQKRGTGGRRGRKRSMASESAPVTDDDNSWKEVNWWSG 180
Query: 362 GKLAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTV 541 G ++ R+ L RKAARQGG K + ++Y + PRR++Q AWRA V + + Sbjct: 181 GNVSKRILQRGALPILTIRKAARQGGKKRMFSVSYHEGSNFPRRTRQLAWRACVGLSQSS 240
Query: 542 AELAVQVRCLDSLLRWDNLL 601 ++LA+QVR LDS +RW + Sbjct: 241 SQLALQVRYLDSHIRWKEFI 260
>tr|B8BJ40|B8BJ40_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35107 PE=4 SV=1 Length = 1888
Score = 93.2 bits (230), Expect = 1e-17 Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 1/200 (0%) Frame = +2
Query: 5 YILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWS 184 Y+ +MEE L+ L+G ++V R+QW +L+ S+ ++ LL+LE+N+R V W Sbjct: 998 YLSHMEESLRGLLVGSLQDVQRRQQWYNQLKDASNCGNIIPLLLELESNIRGVAFSTSWL 1057
Query: 185 ICLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGK-TTLGNVQWIRR 361 ++D P S + P + + V W Sbjct: 1058 KLIDDWPVESPSASAGASRPAAYQKRGTGGRRGRKRSMASESAPVTDDDNSWKEVNWWSG 1117
Query: 362 GKLAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTV 541 G ++ R+ L RKAARQGG K + ++Y + PRR++Q AWRA V + + Sbjct: 1118 GNVSKRILQRGALPILTIRKAARQGGKKRMFSVSYHEGSNFPRRTRQLAWRACVGLSQSS 1177
Query: 542 AELAVQVRCLDSLLRWDNLL 601 ++LA+QVR LD+ +RW + Sbjct: 1178 SQLALQVRYLDAHIRWKEFI 1197
>tr|Q69Q09|Q69Q09_ORYSJ PHD finger transcription factor-like protein OS=Oryza sativa subsp. japonica GN=P0453E03.105 PE=4 SV=1 Length = 1696
Score = 90.1 bits (222), Expect = 9e-17 Identities = 62/199 (31%), Positives = 90/199 (45%) Frame = +2
Query: 8 ILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWSI 187 IL +EE L L+GPW+N F WRK + + S +K LL LE+++R V +W Sbjct: 813 ILSIEERLNGLLIGPWKNPQFSSYWRKAVLKASDVSSLKQPLLMLESSVRRVAFSVEWQ- 871
Query: 188 CLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGKTTLGNVQWIRRGK 367 + A S+ + S K +G V W R G+ Sbjct: 872 --KPADSVEVVGSAAHVLVRTSNKSSRHGSTRKPGRKPFIVELKVDSRDVG-VYWRRGGR 928
Query: 368 LAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTVAE 547 L+ +V W L + KA RQ G I I Y D + RRSK AW+A V+ A VA+ Sbjct: 929 LSRQVFHWKRLPKSLTYKAVRQAGRIKIPTILYSDGSQFARRSKYIAWQAAVEMAENVAQ 988
Query: 548 LAVQVRCLDSLLRWDNLLS 604 +Q++ L+ +RW +LS Sbjct: 989 FILQIKELEFNIRWTEILS 1007
>tr|Q0D3X1|Q0D3X1_ORYSJ Os07g0661500 protein OS=Oryza sativa subsp. japonica GN=Os07g0661500 PE=4 SV=1 Length = 1752
Score = 90.1 bits (222), Expect = 9e-17 Identities = 62/199 (31%), Positives = 90/199 (45%) Frame = +2
Query: 8 ILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWSI 187 IL +EE L L+GPW+N F WRK + + S +K LL LE+++R V +W Sbjct: 813 ILSIEERLNGLLIGPWKNPQFSSYWRKAVLKASDVSSLKQPLLMLESSVRRVAFSVEWQ- 871
Query: 188 CLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGKTTLGNVQWIRRGK 367 + A S+ + S K +G V W R G+ Sbjct: 872 --KPADSVEVVGSAAHVLVRTSNKSSRHGSTRKPGRKPFIVELKVDSRDVG-VYWRRGGR 928
Query: 368 LAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTVAE 547 L+ +V W L + KA RQ G I I Y D + RRSK AW+A V+ A VA+ Sbjct: 929 LSRQVFHWKRLPKSLTYKAVRQAGRIKIPTILYSDGSQFARRSKYIAWQAAVEMAENVAQ 988
Query: 548 LAVQVRCLDSLLRWDNLLS 604 +Q++ L+ +RW +LS Sbjct: 989 FILQIKELEFNIRWTEILS 1007
>tr|A3BN35|A3BN35_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024457 PE=4 SV=1 Length = 1674
Score = 90.1 bits (222), Expect = 9e-17 Identities = 62/199 (31%), Positives = 90/199 (45%) Frame = +2
Query: 8 ILYMEEVLQSFLMGPWENVNFRKQWRKKLEQTSSFCDVKASLLDLEANLRSVVLVEDWSI 187 IL +EE L L+GPW+N F WRK + + S +K LL LE+++R V +W Sbjct: 798 ILSIEERLNGLLIGPWKNPQFSSYWRKAVLKASDVSSLKQPLLMLESSVRRVAFSVEWQ- 856
Query: 188 CLEDAPSMVLGRSVTSCEDDXXXXXXXXXXXXXXXXXXXXXXPKSGKTTLGNVQWIRRGK 367 + A S+ + S K +G V W R G+ Sbjct: 857 --KPADSVEVVGSAAHVLVRTSNKSSRHGSTRKPGRKPFIVELKVDSRDVG-VYWRRGGR 913
Query: 368 LAHRVAGWATLCTKVARKAARQGGIKSITGITYVDSEEVPRRSKQTAWRARVQAACTVAE 547 L+ +V W L + KA RQ G I I Y D + RRSK AW+A V+ A VA+ Sbjct: 914 LSRQVFHWKRLPKSLTYKAVRQAGRIKIPTILYSDGSQFARRSKYIAWQAAVEMAENVAQ 973
Query: 548 LAVQVRCLDSLLRWDNLLS 604 +Q++ L+ +RW +LS Sbjct: 974 FILQIKELEFNIRWTEILS 992
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