DK963432 |
Clone id |
TST39A01NGRL0016_I10 |
Library |
TST39 |
Length |
549 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_I10. 5' end sequence. |
Accession |
DK963432 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AAATAATACTTGTGTTGATAGTGGTAGGATAGGAAACAGGGAAATAGTGAATAGAGTCAA AATTGATATAGATAGTTTACAGGAAAAAGGTAGGATTGAGAATTCAACAGACTTGAAGAA TGTGTTTGGTGATGTCATCGCCGTCAGGCAGAACCTGGATGAACTCACGCCAAGAAATGA TGTAACTATCTTCACCAAAGAGAGTTTCTCTGCAGAAGTAATTGAAGGTACATGCACTTC TGTTGAAGAACAGGCCCCTTTAACCCCGCCCTTGGACGATGTGGGAGATGACGAAGAGGC CAATGCAGAGGAGGAGCAAGAAGAGGGCTTGGATGCATTGAAAATGGCCCTACAAGCAGA GAGGTCAATGCTAGTTGAATTGGAAACAGAGCTCGAGAATGAAAGAAACGCGGCAGCAGT TGCCACCAATGAAGCTATGGCAATGATTTCAAGGCTTCAAGAAGAGAAGTCAGCTATGCA AATGGAGGTGGCTCAGCTGCAGAGAATGTCGGAAGAGAGGGCCGATTATGACGAGCAGGC CATGGCAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P03377 |
Definition |
sp|P03377|ENV_HV1BR Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1 (isolate BRU/LAI group M subtype B) |
Align length |
83 |
Score (bit) |
32.7 |
E-value |
1.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q10NT0 |
Definition |
tr|Q10NT0|Q10NT0_ORYSJ Os03g0259900 protein OS=Oryza sativa subsp. japonica |
Align length |
69 |
Score (bit) |
62.0 |
E-value |
2.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963432|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_I10, 5' (549 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q10NT0|Q10NT0_ORYSJ Os03g0259900 protein OS=Oryza sativa subs... 62 2e-08 tr|A3AG89|A3AG89_ORYSJ Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|A2XER1|A2XER1_ORYSI Putative uncharacterized protein OS=Oryza... 62 2e-08 tr|A9P7W1|A9P7W1_POPTR Putative uncharacterized protein OS=Popul... 59 2e-07 tr|A7PRD8|A7PRD8_VITVI Chromosome chr14 scaffold_26, whole genom... 58 4e-07 tr|A5B2M8|A5B2M8_VITVI Putative uncharacterized protein OS=Vitis... 58 4e-07 tr|A2Q381|A2Q381_MEDTR Putative uncharacterized protein OS=Medic... 57 6e-07 tr|Q9ZTZ4|Q9ZTZ4_ARATH IFA-binding protein OS=Arabidopsis thalia... 55 2e-06 tr|Q9CAC4|Q9CAC4_ARATH Putative uncharacterized protein F5A18.7 ... 55 2e-06 tr|A6MGY3|A6MGY3_LILLO IFA binding protein OS=Lilium longiflorum... 55 2e-06 tr|A9RV31|A9RV31_PHYPA Predicted protein OS=Physcomitrella paten... 55 3e-06 tr|B8AQB9|B8AQB9_ORYSI Putative uncharacterized protein OS=Oryza... 54 4e-06 tr|A9T0C3|A9T0C3_PHYPA Predicted protein OS=Physcomitrella paten... 54 4e-06 tr|Q9LFE5|Q9LFE5_ARATH Putative uncharacterized protein F5E19_60... 53 1e-05 tr|Q53RK9|Q53RK9_ORYSJ Putative uncharacterized protein (Express... 53 1e-05 tr|Q0WNW4|Q0WNW4_ARATH Putative uncharacterized protein At5g1672... 53 1e-05 tr|Q0DP85|Q0DP85_ORYSJ Os03g0708700 protein OS=Oryza sativa subs... 53 1e-05 tr|A9SIB3|A9SIB3_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05 tr|A9SA43|A9SA43_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05 tr|A3ALY1|A3ALY1_ORYSJ Putative uncharacterized protein OS=Oryza... 53 1e-05 tr|A9RYU4|A9RYU4_PHYPA Predicted protein OS=Physcomitrella paten... 52 2e-05 tr|Q9S7T6|Q9S7T6_ARATH Putative uncharacterized protein F9E10.32... 52 3e-05 tr|Q8GXL4|Q8GXL4_ARATH Putative uncharacterized protein At1g7483... 52 3e-05 tr|Q9LMC8|Q9LMC8_ARATH F14D16.14 (Putative uncharacterized prote... 50 8e-05 tr|A7P3R5|A7P3R5_VITVI Chromosome chr1 scaffold_5, whole genome ... 50 8e-05 tr|Q851Q1|Q851Q1_ORYSJ Putative uncharacterized protein OSJNBa00... 49 2e-04 tr|Q10C07|Q10C07_ORYSJ Os03g0799200 protein OS=Oryza sativa subs... 49 2e-04 tr|A9SKP6|A9SKP6_PHYPA Predicted protein OS=Physcomitrella paten... 49 2e-04 tr|A7QI10|A7QI10_VITVI Chromosome chr17 scaffold_101, whole geno... 49 2e-04 tr|A5BSB6|A5BSB6_VITVI Putative uncharacterized protein OS=Vitis... 49 2e-04
>tr|Q10NT0|Q10NT0_ORYSJ Os03g0259900 protein OS=Oryza sativa subsp. japonica GN=Os03g0259900 PE=2 SV=1 Length = 900
Score = 62.0 bits (149), Expect = 2e-08 Identities = 34/69 (49%), Positives = 43/69 (62%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 LK ALQAER L L +EL MI+RLQEEK+AMQME Q QRM EE Sbjct: 535 LKSALQAERKALSALYSELEEERSAAAIATNQTMAMINRLQEEKAAMQMEALQYQRMMEE 594
Query: 518 RADYDEQAM 544 +++YD++A+ Sbjct: 595 QSEYDQEAL 603
>tr|A3AG89|A3AG89_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009811 PE=4 SV=1 Length = 927
Score = 62.0 bits (149), Expect = 2e-08 Identities = 34/69 (49%), Positives = 43/69 (62%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 LK ALQAER L L +EL MI+RLQEEK+AMQME Q QRM EE Sbjct: 562 LKSALQAERKALSALYSELEEERSAAAIATNQTMAMINRLQEEKAAMQMEALQYQRMMEE 621
Query: 518 RADYDEQAM 544 +++YD++A+ Sbjct: 622 QSEYDQEAL 630
>tr|A2XER1|A2XER1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10824 PE=4 SV=1 Length = 927
Score = 62.0 bits (149), Expect = 2e-08 Identities = 34/69 (49%), Positives = 43/69 (62%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 LK ALQAER L L +EL MI+RLQEEK+AMQME Q QRM EE Sbjct: 562 LKSALQAERKALSALYSELEEERSAAAIATNQTMAMINRLQEEKAAMQMEALQYQRMMEE 621
Query: 518 RADYDEQAM 544 +++YD++A+ Sbjct: 622 QSEYDQEAL 630
>tr|A9P7W1|A9P7W1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 460
Score = 58.9 bits (141), Expect = 2e-07 Identities = 32/69 (46%), Positives = 42/69 (60%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 LK AL++ER L TEL MI+RLQEEK+AMQME Q QRM EE Sbjct: 80 LKTALKSERKAFGALYTELEEERSASAIAANQTMAMINRLQEEKAAMQMEALQYQRMMEE 139
Query: 518 RADYDEQAM 544 +++YD++A+ Sbjct: 140 QSEYDQEAL 148
>tr|A7PRD8|A7PRD8_VITVI Chromosome chr14 scaffold_26, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022466001 PE=4 SV=1 Length = 625
Score = 57.8 bits (138), Expect = 4e-07 Identities = 32/69 (46%), Positives = 41/69 (59%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 L AL+AER L L EL MI+RLQEEK+AMQME Q QRM EE Sbjct: 300 LTAALEAERKALRALYAELEEERSASAIAANQTMAMITRLQEEKAAMQMEALQYQRMMEE 359
Query: 518 RADYDEQAM 544 +++YD++A+ Sbjct: 360 QSEYDQEAL 368
>tr|A5B2M8|A5B2M8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000426 PE=4 SV=1 Length = 983
Score = 57.8 bits (138), Expect = 4e-07 Identities = 32/69 (46%), Positives = 41/69 (59%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 L AL+AER L L EL MI+RLQEEK+AMQME Q QRM EE Sbjct: 601 LTAALEAERKALRALYAELEEERSASAIAANQTMAMITRLQEEKAAMQMEALQYQRMMEE 660
Query: 518 RADYDEQAM 544 +++YD++A+ Sbjct: 661 QSEYDQEAL 669
>tr|A2Q381|A2Q381_MEDTR Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC155282g18v2 PE=4 SV=1 Length = 986
Score = 57.0 bits (136), Expect = 6e-07 Identities = 31/69 (44%), Positives = 42/69 (60%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 LK +L+AE+ L + EL MI+RLQEEK+AMQME Q QRM EE Sbjct: 620 LKTSLKAEQRALSAIYQELEEERSASAIATNQTMAMITRLQEEKAAMQMEALQYQRMMEE 679
Query: 518 RADYDEQAM 544 +A+YD++A+ Sbjct: 680 QAEYDQEAL 688
>tr|Q9ZTZ4|Q9ZTZ4_ARATH IFA-binding protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 275
Score = 55.1 bits (131), Expect = 2e-06 Identities = 31/69 (44%), Positives = 39/69 (56%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 LK LQ ER L L EL MI+RL EEK+AMQME Q QRM EE Sbjct: 109 LKFELQEERKALHALYEELEVERNASAVAASETMAMINRLHEEKAAMQMEALQYQRMMEE 168
Query: 518 RADYDEQAM 544 +A++D++A+ Sbjct: 169 QAEFDQEAL 177
>tr|Q9CAC4|Q9CAC4_ARATH Putative uncharacterized protein F5A18.7 (IFA-binding protein) OS=Arabidopsis thaliana GN=At1g70750 PE=2 SV=1 Length = 749
Score = 55.1 bits (131), Expect = 2e-06 Identities = 31/69 (44%), Positives = 39/69 (56%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 LK LQ ER L L EL MI+RL EEK+AMQME Q QRM EE Sbjct: 416 LKFELQEERKALHALYEELEVERNASAVAASETMAMINRLHEEKAAMQMEALQYQRMMEE 475
Query: 518 RADYDEQAM 544 +A++D++A+ Sbjct: 476 QAEFDQEAL 484
>tr|A6MGY3|A6MGY3_LILLO IFA binding protein OS=Lilium longiflorum PE=2 SV=1 Length = 807
Score = 55.1 bits (131), Expect = 2e-06 Identities = 30/69 (43%), Positives = 40/69 (57%) Frame = +2
Query: 338 LKMALQAERSMLVELETELXXXXXXXXXXXXXXXXMISRLQEEKSAMQMEVAQLQRMSEE 517 LK ++ +R L L EL MI+RLQEEK+AMQME Q QRM EE Sbjct: 492 LKRQIEFDRKSLTSLFKELEEERSASAIAANQAMAMINRLQEEKAAMQMEAWQYQRMMEE 551
Query: 518 RADYDEQAM 544 +A+YD++A+ Sbjct: 552 QAEYDQEAL 560
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