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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963404
Clone id TST39A01NGRL0016_H04
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_H04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GCTAAGATGACCTCAATTATGACGAGGACATCGACTGGGGAGGCGGTGACATCCATAGGT
GGGCTTGGAAGATGCGCAAGGGAAAGAAAGGGATGATGATCTGTGAGCTGCCATAGGGCA
TATGCTTCATCTTACGATATGGCCGGGCGGTTGTGAAGCAGAGTTTGGAGCCCCATTTTA
CCCTGGGGAATCCATGGTGGATATGATAGTGGGCAATGGGCTGTGTCAGCTTGACCACCT
TGAGTTTCTCTTGTATTGCTACCTCAGCCTCTTTGAACCCCACCTCCTTCCTATCCTCCT
TTCTCGTTTCCTTCTCGTCCTCACGGACCTAAAAAGACTTTCATAATCTTCATACTTCTT
TCTCTGCTTATTTTGGGAATGTTAAGATTTTGGCCGTGTGTATGTGTCTCTCTCTCCAGC
TAAAATTACCGCTATGAAGTCTCTTTGCTGGTGATTGCAACGTTGCGAGGTTGCTGGTTT
TGACTGC
■■Homology search results ■■ -
sp_hit_id P18431
Definition sp|P18431|SGG_DROME Protein kinase shaggy OS=Drosophila melanogaster
Align length 37
Score (bit) 31.6
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963404|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_H04, 5'
         (487 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P18431|SGG_DROME Protein kinase shaggy OS=Drosophila melanoga...    32   2.0  
sp|O04160|KSGT_BRANA Shaggy-related protein kinase theta OS=Bras...    31   2.6  
sp|Q96287|KSG8_ARATH Shaggy-related protein kinase theta OS=Arab...    31   2.6  
sp|Q98146|VG74_HHV8 G-protein coupled receptor homolog 74 OS=Hum...    30   4.5  
sp|Q62901|RERE_RAT Arginine-glutamic acid dipeptide repeats prot...    30   4.5  
sp|Q80TZ9|RERE_MOUSE Arginine-glutamic acid dipeptide repeats pr...    30   4.5  
sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 OS...    30   4.5  
sp|Q40518|MSK1_TOBAC Shaggy-related protein kinase NtK-1 OS=Nico...    30   4.5  
sp|P38615|MDS1_YEAST Serine/threonine-protein kinase MDS1/RIM11 ...    30   4.5  
sp|Q8VZD5|KSG5_ARATH Shaggy-related protein kinase epsilon OS=Ar...    30   4.5  
sp|Q2QLG9|CTTB2_OTOGA Cortactin-binding protein 2 OS=Otolemur ga...    30   4.5  
sp|Q39012|KSG9_ARATH Shaggy-related protein kinase iota OS=Arabi...    30   5.8  
sp|Q39011|KSG7_ARATH Shaggy-related protein kinase eta OS=Arabid...    30   5.8  
sp|Q39010|KSG6_ARATH Shaggy-related protein kinase zeta OS=Arabi...    30   5.8  
sp|P43289|KSG3_ARATH Shaggy-related protein kinase gamma OS=Arab...    30   5.8  
sp|P43288|KSG1_ARATH Shaggy-related protein kinase alpha OS=Arab...    30   5.8  
sp|Q08DV0|GATA3_BOVIN Trans-acting T-cell-specific transcription...    30   7.5  
sp|P07712|AGN5_APLCA Abdominal ganglion neuropeptides L5-67 OS=A...    30   7.5  
sp|Q9TM34|RPOC2_CYACA DNA-directed RNA polymerase subunit beta''...    30   7.6  
sp|Q9FVS6|KSG4_ARATH Shaggy-related protein kinase delta OS=Arab...    30   7.6  
sp|Q39019|KSG10_ARATH Shaggy-related protein kinase kappa OS=Ara...    30   7.6  
sp|Q8YIM6|PDHS_BRUME Cell-division control histidine kinase pdhS...    29   9.8  
sp|Q6P7A1|LARG2_RAT Glycosyltransferase-like protein LARGE2 OS=R...    29   9.8  
sp|P23772|GATA3_MOUSE Trans-acting T-cell-specific transcription...    29   9.8  

>sp|P18431|SGG_DROME Protein kinase shaggy OS=Drosophila
           melanogaster GN=sgg PE=1 SV=2
          Length = 1067

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +2

Query: 110 AIGHMLHLTIWPGGC---EAEFGAPFYPGESMVDMIV 211
           AI +   + +W  GC   E   G P +PG+S VD +V
Sbjct: 782 AINYTTKIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 818


>sp|O04160|KSGT_BRANA Shaggy-related protein kinase theta
           OS=Brassica napus PE=2 SV=2
          Length = 468

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +2

Query: 131 LTIWPGGC---EAEFGAPFYPGESMVDMIV 211
           + +W GGC   E   G P +PGES +D +V
Sbjct: 316 IDMWSGGCVMAELLLGQPLFPGESGIDQLV 345


>sp|Q96287|KSG8_ARATH Shaggy-related protein kinase theta
           OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3
          Length = 472

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +2

Query: 131 LTIWPGGC---EAEFGAPFYPGESMVDMIV 211
           + +W GGC   E   G P +PGES +D +V
Sbjct: 320 IDMWSGGCVMAELLLGQPLFPGESGIDQLV 349


>sp|Q98146|VG74_HHV8 G-protein coupled receptor homolog 74 OS=Human
           herpesvirus 8 GN=74 PE=3 SV=1
          Length = 342

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 206 IVGNGLCQLDHLEFLLYCYLSLFEPHLLPILLSRFLLV 319
           I+  GLC+L+   + LY YL +F   ++ + L R+LLV
Sbjct: 112 IISTGLCRLEIFFYYLYVYLDIFS--VVCVSLVRYLLV 147


>sp|Q62901|RERE_RAT Arginine-glutamic acid dipeptide repeats protein
            OS=Rattus norvegicus GN=Rere PE=2 SV=2
          Length = 1559

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -2

Query: 168  PNSASQPPGHIVR*SICPMAAHRSSSLSFPCASSKPTYGCHRLPSRCP 25
            P+S +QPPG             +S SL  P AS   T G H++PS+ P
Sbjct: 989  PSSPAQPPG-----------LTQSQSLPPPAASHPTTGGLHQVPSQSP 1025


>sp|Q80TZ9|RERE_MOUSE Arginine-glutamic acid dipeptide repeats protein
            OS=Mus musculus GN=Rere PE=1 SV=2
          Length = 1558

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 19/48 (39%), Positives = 26/48 (54%)
 Frame = -2

Query: 168  PNSASQPPGHIVR*SICPMAAHRSSSLSFPCASSKPTYGCHRLPSRCP 25
            P+S +QPPG             +S SL  P A+S PT G H++PS+ P
Sbjct: 990  PSSPAQPPG-----------LTQSQSLP-PPAASHPTTGLHQVPSQSP 1025


>sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3
           OS=Medicago sativa GN=MSK-3 PE=2 SV=2
          Length = 411

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +2

Query: 131 LTIWPGGC---EAEFGAPFYPGESMVDMIV 211
           + IW  GC   E   G P +PGES VD +V
Sbjct: 256 IDIWSAGCVLGELLLGQPLFPGESGVDQLV 285


>sp|Q40518|MSK1_TOBAC Shaggy-related protein kinase NtK-1
           OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1
          Length = 409

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +2

Query: 131 LTIWPGGC---EAEFGAPFYPGESMVDMIV 211
           + IW  GC   E   G P +PGES VD +V
Sbjct: 255 IDIWSAGCVLAELLLGQPLFPGESGVDQLV 284


>sp|P38615|MDS1_YEAST Serine/threonine-protein kinase MDS1/RIM11
           OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1
          Length = 370

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = +2

Query: 110 AIGHMLHLTIWPGGC---EAEFGAPFYPGESMVDMIV 211
           A  +   + IW  GC   E   G P +PGES +D +V
Sbjct: 214 ATNYTNQIDIWSSGCVMAELLLGQPMFPGESGIDQLV 250


>sp|Q8VZD5|KSG5_ARATH Shaggy-related protein kinase epsilon
           OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1
          Length = 410

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +2

Query: 131 LTIWPGGC---EAEFGAPFYPGESMVDMIV 211
           + IW  GC   E   G P +PGES VD +V
Sbjct: 256 IDIWSAGCVLAELLLGQPLFPGESGVDQLV 285
tr_hit_id A9TY61
Definition tr|A9TY61|A9TY61_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 41
Score (bit) 41.6
E-value 0.02
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963404|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0016_H04, 5'
         (487 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TY61|A9TY61_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.020
tr|Q5W6T7|Q5W6T7_ORYSJ Os05g0324600 protein OS=Oryza sativa subs...    35   1.9  
tr|B8AWM6|B8AWM6_ORYSI Putative uncharacterized protein OS=Oryza...    35   1.9  
tr|A9RDL9|A9RDL9_PHYPA Predicted protein OS=Physcomitrella paten...    35   1.9  
tr|Q5ZEA2|Q5ZEA2_ORYSJ cDNA clone:001-117-G11, full insert seque...    34   3.2  
tr|B6U5V3|B6U5V3_MAIZE Plant-specific domain TIGR01568 family pr...    34   3.2  
tr|A2WST3|A2WST3_ORYSI Putative uncharacterized protein OS=Oryza...    34   3.2  
tr|Q5NAJ4|Q5NAJ4_ORYSJ Putative uncharacterized protein P0443E07...    34   4.2  
tr|B7FMT7|B7FMT7_MEDTR Putative uncharacterized protein OS=Medic...    34   4.2  
tr|B4FIJ6|B4FIJ6_MAIZE Putative uncharacterized protein OS=Zea m...    34   4.2  
tr|A7QDF8|A7QDF8_VITVI Chromosome chr10 scaffold_81, whole genom...    34   4.2  
tr|A2WMA5|A2WMA5_ORYSI Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|Q5KQA2|Q5KQA2_ORYSJ Putative uncharacterized protein OSJNOa01...    33   5.5  
tr|A2Y1P0|A2Y1P0_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.5  
tr|A9RG43|A9RG43_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.2  
tr|B7FIK4|B7FIK4_MEDTR Putative uncharacterized protein OS=Medic...    33   9.1  
tr|B5HRD9|B5HRD9_9ACTO Cellulose-binding protein OS=Streptomyces...    33   9.3  
tr|Q10LS2|Q10LS2_ORYSJ Uncharacterized plant-specific domain TIG...    33   9.3  
tr|Q0DS29|Q0DS29_ORYSJ Os03g0336900 protein OS=Oryza sativa subs...    33   9.3  
tr|B6UDE1|B6UDE1_MAIZE Ovate protein OS=Zea mays PE=2 SV=1             33   9.3  
tr|A3AHQ5|A3AHQ5_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.3  
tr|A2XGG2|A2XGG2_ORYSI Putative uncharacterized protein OS=Oryza...    33   9.3  

>tr|A9TY61|A9TY61_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_98835 PE=4 SV=1
          Length = 931

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 20/41 (48%), Positives = 26/41 (63%)
 Frame = +2

Query: 188  ESMVDMIVGNGLCQLDHLEFLLYCYLSLFEPHLLPILLSRF 310
            ESM+DMIV   + Q   LE LL CYL+L EP   P+++  F
Sbjct: 878  ESMIDMIVDQNIQQTSDLEELLQCYLALNEPEYHPVIVDVF 918


>tr|Q5W6T7|Q5W6T7_ORYSJ Os05g0324600 protein OS=Oryza sativa subsp.
           japonica GN=P0018A03.12 PE=2 SV=1
          Length = 260

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +2

Query: 188 ESMVDMIVGNGLCQLDHLEFLLYCYLSL 271
           ESMV+M+VGNG+   + L  LL CYLSL
Sbjct: 203 ESMVEMVVGNGMRSPEDLLELLECYLSL 230


>tr|B8AWM6|B8AWM6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_19476 PE=4 SV=1
          Length = 260

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = +2

Query: 188 ESMVDMIVGNGLCQLDHLEFLLYCYLSL 271
           ESMV+M+VGNG+   + L  LL CYLSL
Sbjct: 203 ESMVEMVVGNGMRSPEDLLELLECYLSL 230


>tr|A9RDL9|A9RDL9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64682 PE=4 SV=1
          Length = 765

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +2

Query: 191 SMVDMIVGNGLCQLDHLEFLLYCYLSLFEPHLLPILLSRF 310
           SM+DMI+   + Q   +E LL CYL+L EP    +++  F
Sbjct: 713 SMIDMIIDQNIQQTSDMEELLQCYLALNEPDYHQVIVEVF 752


>tr|Q5ZEA2|Q5ZEA2_ORYSJ cDNA clone:001-117-G11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0006C01.17 PE=2 SV=1
          Length = 366

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +2

Query: 191 SMVDMIVGNGLCQLDHLEFLLYCYLSLFEPHLLPILLSRF 310
           SMV+M+V   +C +  +E LL  YLSL  P   P +L+ F
Sbjct: 316 SMVEMVVERRICSVPEMEELLGSYLSLNSPQHHPAILAAF 355


>tr|B6U5V3|B6U5V3_MAIZE Plant-specific domain TIGR01568 family
           protein OS=Zea mays PE=2 SV=1
          Length = 279

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query: 188 ESMVDMIVGNGLCQLDHLEFLLYCYLSL--FEPHLLPILLSRFLLVLTDLKR 337
           ESM +M+V NG+   + LE LL CYL+L   E H   +   R + +L D  R
Sbjct: 224 ESMSEMVVANGIRSSEDLEELLACYLALNAAEHHRAVVAAFRRIWLLLDKHR 275


>tr|A2WST3|A2WST3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02927 PE=4 SV=1
          Length = 366

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/40 (42%), Positives = 24/40 (60%)
 Frame = +2

Query: 191 SMVDMIVGNGLCQLDHLEFLLYCYLSLFEPHLLPILLSRF 310
           SMV+M+V   +C +  +E LL  YLSL  P   P +L+ F
Sbjct: 316 SMVEMVVERRICSVPEMEELLGSYLSLNSPQHHPAILAAF 355


>tr|Q5NAJ4|Q5NAJ4_ORYSJ Putative uncharacterized protein P0443E07.29
           (Os01g0226700 protein) OS=Oryza sativa subsp. japonica
           GN=P0443E07.29 PE=4 SV=1
          Length = 250

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = +2

Query: 191 SMVDMIVGNGLCQLDHLEFLLYCYLSLFEPHLLPILLSRF 310
           SMV+M+VG  L     LE LL  YLSL  P   P++L  F
Sbjct: 201 SMVEMVVGRQLFGAAELERLLRSYLSLNAPRHHPVILQAF 240


>tr|B7FMT7|B7FMT7_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 206

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/48 (41%), Positives = 26/48 (54%)
 Frame = +2

Query: 188 ESMVDMIVGNGLCQLDHLEFLLYCYLSLFEPHLLPILLSRFLLVLTDL 331
           ESMV+MIV N +     LE LL CYLSL       +++  F  +  DL
Sbjct: 155 ESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDL 202


>tr|B4FIJ6|B4FIJ6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 377

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = +2

Query: 191 SMVDMIVGNGLCQLDHLEFLLYCYLSLFEPHLLPILLSRF 310
           SMV+MIVG  L     +E LL  YLSL  P   P++L  F
Sbjct: 328 SMVEMIVGRQLLGAPDMERLLRSYLSLNAPRHHPVILQAF 367