DK963398 |
Clone id |
TST39A01NGRL0016_G22 |
Library |
TST39 |
Length |
666 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_G22. 5' end sequence. |
Accession |
DK963398 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CGGAAGGGATCCATCGAGCTAATTAGCGCCCGCAGCAGCTCATCATCCTGGAATTGTAAT GGCGTCGGCCGTAGCTTCTGCAACTTCATTGCGCCGGATGCTGCTAAGCGCGGCGGCCTG CATGCTGATTATAGCAGCTACCTGCGACAGCGCTAAACCCAACCCCAAGGACCTGGTGTT CTACATACACATCACCCCTGGCGTCACCAACACCGCCATCCTGAACGCCACCTCCGGAAA CCCTCGCTTCCAGCCCCTCACGGCCTTCGACCTTCCCGTCACCGCGGAGCCCAACTCCAC CTCCGAAAGCCTAGGGTTTCTGCGGGGCCTCGGCATCGTCTTCAACGGCACCGTCGACTC CACACCGACTCTGGAGCAGCTCCTTAGTACCCTCTTCTATGACGACGGCGACTGCTCCGG CACGCTGGCCCTCCACGGCCTCATCGATTCCAGCTTCAGCGGCCTCCCCGTGGAACTCGC CGTCGTCGGTGGCACCGGATGCTTCCGCTTCGCCAAAGGCTACGCCACCATCGCCTTCGT CTCCGCCCCCCCCGTCGTGCTCCAGTACTCCGTCTCCCTTCGTTGATCTCAGCGATCGAC CATACACATGCACGAGACGCATTATTTACAAATCCTAAATTCCTAATATAGCATTTCTTG GCCATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P19601 |
Definition |
sp|P19601|SAX1_CHICK Homeobox protein SAX-1 (Fragment) OS=Gallus gallus |
Align length |
91 |
Score (bit) |
34.7 |
E-value |
0.47 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A6YR07 |
Definition |
tr|A6YR07|A6YR07_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
164 |
Score (bit) |
54.3 |
E-value |
7.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963398|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_G22, 5' (666 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A6YR07|A6YR07_PICSI Putative uncharacterized protein OS=Picea... 54 7e-06 tr|A6YR06|A6YR06_PICSI Dirigent-like protein (Putative uncharact... 54 1e-05 tr|Q27J95|Q27J95_PICSI Dirigent-like protein pDIR17 OS=Picea sit... 53 2e-05 tr|Q01MM3|Q01MM3_ORYSA H1005F08.21 protein OS=Oryza sativa GN=H1... 53 2e-05 tr|A2XYQ0|A2XYQ0_ORYSI Putative uncharacterized protein OS=Oryza... 53 2e-05 tr|Q94LE8|Q94LE8_ORYSJ Putative disease resistance response prot... 52 3e-05 tr|Q10K20|Q10K20_ORYSJ Os03g0400200 protein OS=Oryza sativa subs... 52 3e-05 tr|Q53NP6|Q53NP6_ORYSJ Dirigent-like protein OS=Oryza sativa sub... 50 1e-04 tr|Q0J992|Q0J992_ORYSJ Os04g0666800 protein OS=Oryza sativa subs... 50 1e-04 tr|A2XHQ0|A2XHQ0_ORYSI Putative uncharacterized protein OS=Oryza... 50 1e-04 tr|A6YQZ8|A6YQZ8_PICSI Dirigent-like protein (Putative uncharact... 50 2e-04 tr|A2XHQ3|A2XHQ3_ORYSI Putative uncharacterized protein OS=Oryza... 50 2e-04 tr|B6TQI8|B6TQI8_MAIZE Dirigent-like protein pDIR9 OS=Zea mays P... 49 2e-04 tr|A2ZC29|A2ZC29_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|A5BFL5|A5BFL5_VITVI Putative uncharacterized protein OS=Vitis... 49 3e-04 tr|A6YR04|A6YR04_PICSI Dirigent-like protein (Putative uncharact... 48 6e-04 tr|B4FVX8|B4FVX8_MAIZE Putative uncharacterized protein OS=Zea m... 47 8e-04 tr|Q27JA2|Q27JA2_PICGL Dirigent-like protein pDIR10 OS=Picea gla... 47 0.001 tr|Q0WYB7|Q0WYB7_NICBE Putative uncharacterized protein OS=Nicot... 47 0.001 tr|B6U8G2|B6U8G2_MAIZE Dirigent-like protein pDIR12 OS=Zea mays ... 47 0.001 tr|Q9FIG7|Q9FIG7_ARATH Disease resistance response protein-like ... 47 0.001 tr|Q2R0I1|Q2R0I1_ORYSJ Dirigent-like protein, expressed OS=Oryza... 47 0.001 tr|Q0IRD8|Q0IRD8_ORYSJ Os11g0644700 protein (Fragment) OS=Oryza ... 47 0.001 tr|B6U3X1|B6U3X1_MAIZE Disease resistance response protein 206 O... 47 0.001 tr|A7P884|A7P884_VITVI Chromosome chr3 scaffold_8, whole genome ... 47 0.001 tr|A6YR01|A6YR01_PICSI Dirigent-like protein OS=Picea sitchensis... 47 0.001 tr|A2Y992|A2Y992_ORYSI Putative uncharacterized protein OS=Oryza... 47 0.001 tr|Q9FIG6|Q9FIG6_ARATH Similarity to disease resistance response... 46 0.002 tr|Q4U1X1|Q4U1X1_GOSBA Dirigent-like protein OS=Gossypium barbad... 46 0.002 tr|Q27JB1|Q27JB1_PICGL Dirigent-like protein pDIR1 OS=Picea glau... 46 0.002
>tr|A6YR07|A6YR07_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 164
Score = 54.3 bits (129), Expect = 7e-06 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 8/164 (4%) Frame = +2
Query: 116 ACMLIIAATCDSAKPNPKDLVFYIHITPGVTNTAILNATSGN---PRFQPLTAFDLPVTA 286 A +L IA S K ++VFY+H +N + +G+ P F + D +T Sbjct: 10 AFILCIAMAARSEKEI--NMVFYMHDVVAGSNRTAVQVGAGSSIKPGFGAMVVIDDALTR 67
Query: 287 EPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSG-TLALHG----LIDS 451 P+ S +G +G+ + + + ++P + + G+ SG TL++ G +D Sbjct: 68 TPSPDSTLVGRAQGMYLSDSLAILTSPDSLLAFTAILEWPGEYSGSTLSIQGGNRMFMDQ 127
Query: 452 SFSGLPVELAVVGGTGCFRFAKGYATIAFVSAPPVVLQYSVSLR 583 E++VVGGTG FRFA GYAT+ VS LQ++V++R Sbjct: 128 R------EVSVVGGTGKFRFALGYATVHNVS---TALQFNVTVR 162
>tr|A6YR06|A6YR06_PICSI Dirigent-like protein (Putative uncharacterized protein) OS=Picea sitchensis PE=2 SV=1 Length = 164
Score = 53.5 bits (127), Expect = 1e-05 Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 8/164 (4%) Frame = +2
Query: 116 ACMLIIAATCDSAKPNPKDLVFYIHITPGVTNTAILNATSGN---PRFQPLTAFDLPVTA 286 A +L IA S K ++VFY+H +N +G+ P F + D +T Sbjct: 10 AFILCIAMAARSEKEI--NMVFYMHDVVAGSNRTAAQVGAGSSIKPGFGAMVVIDDALTR 67
Query: 287 EPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSG-TLALHG----LIDS 451 P+ S +G +G+ + + + ++P + + G+ SG TL++ G +D Sbjct: 68 TPSPDSTLVGRAQGMYLSDSLAILTSPDSLLAFTAILEWPGEYSGSTLSIQGGNRMFMDQ 127
Query: 452 SFSGLPVELAVVGGTGCFRFAKGYATIAFVSAPPVVLQYSVSLR 583 E++VVGGTG FRFA GYAT+ VS LQ++V++R Sbjct: 128 R------EVSVVGGTGKFRFALGYATVHNVS---TALQFNVTVR 162
>tr|Q27J95|Q27J95_PICSI Dirigent-like protein pDIR17 OS=Picea sitchensis PE=2 SV=1 Length = 178
Score = 52.8 bits (125), Expect = 2e-05 Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 5/147 (3%) Frame = +2
Query: 122 MLIIAATCDSAKPNPKDLVFYIHIT-PGVTNTAIL----NATSGNPRFQPLTAFDLPVTA 286 +L + D K L FY H G+ TA+ N TS F + D P+T Sbjct: 20 LLCVLQRSDGTKEKTTHLHFYFHDRLAGINATAVAVASANVTSATG-FGGVVVLDDPLTE 78
Query: 287 EPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSGTLALHGLIDSSFSGL 466 PN TS+ LG +GL + G L +L+ +F TL + G D F+ + Sbjct: 79 GPNVTSKLLGRAQGL---YAGVGQEQHVLLMVLTFVFQTGEYNGSTLTMVGN-DVIFNKV 134
Query: 467 PVELAVVGGTGCFRFAKGYATIAFVSA 547 EL +VGG+G FR A+GYA + ++A Sbjct: 135 R-ELPIVGGSGVFRLARGYALLQTITA 160
>tr|Q01MM3|Q01MM3_ORYSA H1005F08.21 protein OS=Oryza sativa GN=H1005F08.21 PE=4 SV=1 Length = 169
Score = 52.8 bits (125), Expect = 2e-05 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 5/148 (3%) Frame = +2
Query: 119 CMLIIAATCDSAKPNPKDLVFYIH-ITPGVTNTAILNATS---GNPRFQPLTAFDLPVTA 286 C+L I C L FY H + G N ++N S + F + FD + Sbjct: 12 CLLPIIV-CSVVDAELTHLHFYFHEVDAGTPNATVVNVASLHRNSSTFGDVNVFDNALRE 70
Query: 287 EPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSG-TLALHGLIDSSFSG 463 P+ S +G GL + + ++D T L + + +F D G SG TLA G ++ Sbjct: 71 GPDPASRLIGRAHGLAV--HASLDETGGLTAI-NFVFSDYGAYSGSTLATQGHFITTG-- 125
Query: 464 LPVELAVVGGTGCFRFAKGYATIAFVSA 547 P E ++VGGTG RFA+GY T +S+ Sbjct: 126 -PSERSIVGGTGKLRFARGYMTSKLLSS 152
>tr|A2XYQ0|A2XYQ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17832 PE=4 SV=1 Length = 169
Score = 52.8 bits (125), Expect = 2e-05 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 5/148 (3%) Frame = +2
Query: 119 CMLIIAATCDSAKPNPKDLVFYIH-ITPGVTNTAILNATS---GNPRFQPLTAFDLPVTA 286 C+L I C L FY H + G N ++N S + F + FD + Sbjct: 12 CLLPIIV-CSVVDAELTHLHFYFHEVDAGTPNATVVNVASLHRNSSTFGDVNVFDNALRE 70
Query: 287 EPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSG-TLALHGLIDSSFSG 463 P+ S +G GL + + ++D T L + + +F D G SG TLA G ++ Sbjct: 71 GPDPASRLIGRAHGLAV--HASLDETGGLTAI-NFVFSDYGAYSGSTLATQGHFITTG-- 125
Query: 464 LPVELAVVGGTGCFRFAKGYATIAFVSA 547 P E ++VGGTG RFA+GY T +S+ Sbjct: 126 -PSERSIVGGTGKLRFARGYMTSKLLSS 152
>tr|Q94LE8|Q94LE8_ORYSJ Putative disease resistance response protein OS=Oryza sativa subsp. japonica GN=Os03g28190 PE=4 SV=1 Length = 178
Score = 52.0 bits (123), Expect = 3e-05 Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 8/158 (5%) Frame = +2
Query: 101 LLSAAACMLIIAATCDSAKPNPKDLVFYIHITPGVTNTAI-------LNATSGNPRFQPL 259 ++ A + ++AA L FYIH T N L N F + Sbjct: 8 IICLLAFLAVLAAATGDGTTTTTHLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSV 67
Query: 260 TAFDLPVTAEPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSG-TLALH 436 A D + ++ S LG + GL + + P L TL + GD +G TL L Sbjct: 68 GALDDELREGSDAASRYLGRVEGLVVQADL---GNPAAAWTLLTLAFAGGDYNGSTLVLD 124
Query: 437 GLIDSSFSGLPVELAVVGGTGCFRFAKGYATIAFVSAP 550 G +D +G +E AVVGGTG FR A+GY+ + P Sbjct: 125 GRVDFGAAG-DMERAVVGGTGRFRRARGYSLMTKFGNP 161
>tr|Q10K20|Q10K20_ORYSJ Os03g0400200 protein OS=Oryza sativa subsp. japonica GN=Os03g0400200 PE=4 SV=1 Length = 177
Score = 52.0 bits (123), Expect = 3e-05 Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 8/158 (5%) Frame = +2
Query: 101 LLSAAACMLIIAATCDSAKPNPKDLVFYIHITPGVTNTAI-------LNATSGNPRFQPL 259 ++ A + ++AA L FYIH T N L N F + Sbjct: 7 IICLLAFLAVLAAATGDGTTTTTHLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSV 66
Query: 260 TAFDLPVTAEPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSG-TLALH 436 A D + ++ S LG + GL + + P L TL + GD +G TL L Sbjct: 67 GALDDELREGSDAASRYLGRVEGLVVQADL---GNPAAAWTLLTLAFAGGDYNGSTLVLD 123
Query: 437 GLIDSSFSGLPVELAVVGGTGCFRFAKGYATIAFVSAP 550 G +D +G +E AVVGGTG FR A+GY+ + P Sbjct: 124 GRVDFGAAG-DMERAVVGGTGRFRRARGYSLMTKFGNP 160
>tr|Q53NP6|Q53NP6_ORYSJ Dirigent-like protein OS=Oryza sativa subsp. japonica GN=Os11g0179100 PE=4 SV=1 Length = 177
Score = 50.4 bits (119), Expect = 1e-04 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 11/169 (6%) Frame = +2
Query: 110 AAACMLIIAATCDSAKPNPKDLVFYIHITPGVTNTAILNATSGNPRFQPLTAF------D 271 AAA +++ AAT A+ K VF+ + G N+ + T F D Sbjct: 11 AAALLVLAAATAAQAQRETKLRVFWHDVVSGGPNSTVAQVAEAPTTNASATGFGAVVVID 70
Query: 272 LPVTAEPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSGT-LALHGLID 448 P+T PN T+ L R G+ D+ +L ++ +F DG +G+ LA+ G Sbjct: 71 DPLTDGPNLTASRL-VGRAQGMYVAAGKDAL-SLMMAMNFVFAGDGPYNGSSLAILGANP 128
Query: 449 SSFSGLPVELAVVGGTGCFRFAKGY--ATIAFVSAP--PVVLQYSVSLR 583 + + E+ VVGGTG FRFA+GY AT + +A ++Y++ LR Sbjct: 129 AERAVR--EMPVVGGTGVFRFARGYCQATTWWFNATTGDATVEYNIHLR 175
>tr|Q0J992|Q0J992_ORYSJ Os04g0666800 protein OS=Oryza sativa subsp. japonica GN=Os04g0666800 PE=4 SV=1 Length = 169
Score = 50.4 bits (119), Expect = 1e-04 Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 5/148 (3%) Frame = +2
Query: 119 CMLIIAATCDSAKPNPKDLVFYIH-ITPGVTNTAILNATS---GNPRFQPLTAFDLPVTA 286 C+L I C L FY H + G N ++N S + F + D + Sbjct: 12 CLLPIIV-CSVVDAELTHLHFYFHEVDAGTPNATVVNVASLHRNSSTFGDVNVLDNALRE 70
Query: 287 EPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSG-TLALHGLIDSSFSG 463 P+ S +G GL + + ++D T L + + +F D G SG TLA G ++ Sbjct: 71 GPDPASRLIGRAHGLAV--HASLDETGGLTAI-NFVFSDYGAYSGSTLATQGHFITTG-- 125
Query: 464 LPVELAVVGGTGCFRFAKGYATIAFVSA 547 P E ++VGGTG RFA+GY T +S+ Sbjct: 126 -PSERSIVGGTGKLRFARGYMTSKLLSS 152
>tr|A2XHQ0|A2XHQ0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11940 PE=4 SV=1 Length = 177
Score = 50.4 bits (119), Expect = 1e-04 Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 8/158 (5%) Frame = +2
Query: 101 LLSAAACMLIIAATCDSAKPNPKDLVFYIHITPGVTNTAI-------LNATSGNPRFQPL 259 ++ A + ++A L FYIH T N L N F + Sbjct: 7 IICLLAFLAVLAVATGDGTTTTTHLHFYIHETFAGDNATTASLAPSPLAVAGSNSSFGSV 66
Query: 260 TAFDLPVTAEPNSTSESLGFLRGLGIVFNGTVDSTPTLEQLLSTLFYDDGDCSG-TLALH 436 A D + ++ S LG + GL + + P L TL + GD +G TL L Sbjct: 67 GALDDELREGSDAASRYLGRVEGLVVQADL---GNPAAAWTLLTLAFAGGDYNGSTLVLD 123
Query: 437 GLIDSSFSGLPVELAVVGGTGCFRFAKGYATIAFVSAP 550 G +D +G +E AVVGGTG FR A+GY+ + P Sbjct: 124 GRVDFGAAG-DMERAVVGGTGRFRRARGYSLMTKFGNP 160
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