DK963290 |
Clone id |
TST39A01NGRL0016_C06 |
Library |
TST39 |
Length |
671 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_C06. 5' end sequence. |
Accession |
DK963290 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL382Contig1 |
Sequence |
TGCACTCTCTCCTCTCCCTCCACAATCGCCAGGGGACCAAGGGTTTCGCGAGGGTTTCCG GCCATGGCTGCAGCTGCTGCAGCTCTTTCTGCGCGCCCGTTCTCTCGGAATGATTTTTCT ATTTCCGGCAGTGAGATCTGCTGTAGTAGCAGCTCTACCAGCAAGATCCTTGGAGGCCAG CTCGCCATCGGATCTAGAAATTATTCCCCTCTCAAGCTTGGATCCTCTCTCTGCCACAGC TATGGCACCTCCGCTTTGAGACAGAGATTCGTCTCTTCGAAGCCTGGCAGTAGGAACAGG GAGCTGACAATAACGGCGAGTGCTGCTGCTGCCTCTGTTCCTGCGGCCCCTGCTCCTGCC CCTCCTTCCACCCAGCAATGGCAAGGCGCCGACATGAAATCCTTGCTTATTTCTATAGCT ACAGGTGTTGCGATCTGGTTCATTCCTGCTCCCTCGGGAGTTTCAAAGAATGCTTGGCAG CTTCTTTCGATTTTCCTCGCCACTATTGTGGGCATCATCACCCAACCTCTCCCTCTCGGA GCTGTGGCTCTCATGGGACTTGGTGCTTGCGTGCTAACCAAAACTCTCACATTTGCTGCA GCCTTCTCTTCTTTTGGTGATCCTATCCCTTGGCTCATTGCCCTTGCCTTTTTCTTCGCT CGTGGTTTCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q41364 |
Definition |
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea |
Align length |
99 |
Score (bit) |
172.0 |
E-value |
1.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963290|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_C06, 5' (671 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chlorop... 172 1e-42 sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillu... 105 3e-22 sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia ... 55 3e-07 sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella... 53 2e-06 sp|Q32BQ4|TTDT_SHIDS L-tartrate/succinate antiporter OS=Shigella... 53 2e-06 sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escheric... 53 2e-06 sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escheric... 53 2e-06 sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella... 52 3e-06 sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escheric... 52 3e-06 sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escheric... 52 4e-06 sp|Q8FDG7|TTDT_ECOL6 L-tartrate/succinate antiporter OS=Escheric... 52 4e-06 sp|P0AE74|CITT_ECOLI Citrate carrier OS=Escherichia coli (strain... 52 4e-06 sp|P0AE75|CITT_ECO57 Citrate carrier OS=Escherichia coli O157:H7... 52 4e-06 sp|Q31WX1|TTDT_SHIBS L-tartrate/succinate antiporter OS=Shigella... 50 8e-06 sp|Q57048|Y020_HAEIN Uncharacterized transporter HI0020 OS=Haemo... 49 2e-05 sp|Q9GZR3|CFC1_HUMAN Cryptic protein OS=Homo sapiens GN=CFC1 PE=... 38 0.055 sp|P0AFU2|YFBS_ECOLI Uncharacterized transporter yfbS OS=Escheri... 37 0.12 sp|P0AFU3|YFBS_ECO57 Uncharacterized transporter yfbS OS=Escheri... 37 0.12 sp|P97766|CFC1_MOUSE Cryptic protein OS=Mus musculus GN=Cfc1 PE=... 36 0.16 sp|P0AA23|EBR_SALTY Putative ethidium bromide resistance protein... 35 0.27 sp|P0AA24|EBR_PSEAE Putative ethidium bromide resistance protein... 35 0.27 sp|P0AA22|EBR_ECOLX Putative ethidium bromide resistance protein... 35 0.27 sp|Q5XIB1|TSSC4_RAT Protein TSSC4 OS=Rattus norvegicus GN=Tssc4 ... 34 0.80 sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila m... 33 1.4 sp|O67776|Y1964_AQUAE Putative zinc metalloprotease aq_1964 OS=A... 32 2.3 sp|A7XCC9|ORF24_TTVV3 ORF2/4 protein OS=Torque teno virus (isola... 32 2.3 sp|Q9P6R9|CWC22_SCHPO Pre-mRNA-splicing factor cwc22 OS=Schizosa... 31 5.2 sp|A1B673|ILVD_PARDP Dihydroxy-acid dehydratase OS=Paracoccus de... 31 6.8 sp|Q8ST87|ABCCA_DICDI ABC transporter C family member 10 OS=Dict... 31 6.8 sp|Q1QF31|NHAA_NITHX Na(+)/H(+) antiporter nhaA OS=Nitrobacter h... 30 8.8
>sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea GN=SODIT1 PE=1 SV=1 Length = 569
Score = 172 bits (437), Expect = 1e-42 Identities = 84/99 (84%), Positives = 90/99 (90%) Frame = +1
Query: 373 QQWQGADMKSLLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVAL 552 Q WQGA +K LL SI TGV IWFIP P GVS+NAWQLL+IFL+TIVGIITQPLPLGAVAL Sbjct: 97 QPWQGASIKPLLASILTGVIIWFIPTPEGVSRNAWQLLAIFLSTIVGIITQPLPLGAVAL 156
Query: 553 MGLGACVLTKTLTFAAAFSSFGDPIPWLIALAFFFARGF 669 MGLGA VLTKTLTF+AAFS+FGDPIPWLIALAFFFARGF Sbjct: 157 MGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGF 195
>sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillus subtilis GN=yflS PE=2 SV=1 Length = 478
Score = 105 bits (261), Expect = 3e-22 Identities = 47/89 (52%), Positives = 63/89 (70%) Frame = +1
Query: 403 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLTK 582 LLI++A G+ IWFIPAPSG+ AW L +IF+ATI+G I++PLP+GA+A+ L LT Sbjct: 18 LLITVAVGLIIWFIPAPSGLEPKAWHLFAIFVATIIGFISKPLPMGAIAIFALAVTALTG 77
Query: 583 TLTFAAAFSSFGDPIPWLIALAFFFARGF 669 TL+ S FG+ WLI +AFF +RGF Sbjct: 78 TLSIEDTLSGFGNKTIWLIVIAFFISRGF 106
>sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia coli (strain K12) GN=ybhI PE=1 SV=1 Length = 477
Score = 55.1 bits (131), Expect = 3e-07 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%) Frame = +1
Query: 403 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLT- 579 L++ +A I F+PAP+G+S+ AW L I+LA IVG++ +P P V L+ + A ++ Sbjct: 9 LILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVV 68
Query: 580 -----KTLTFAAAFSSFGDPIPWLIALAFFFARGF 669 A S + WL+ AF + F Sbjct: 69 GNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAF 103
>sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella sonnei (strain Ss046) GN=ttdT PE=3 SV=1 Length = 487
Score = 52.8 bits (125), Expect = 2e-06 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Frame = +1
Query: 406 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 582 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 583 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGF 669 L F+ A S F + + WLI AF F G+ Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGY 116
>sp|Q32BQ4|TTDT_SHIDS L-tartrate/succinate antiporter OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ttdT PE=3 SV=1 Length = 487
Score = 52.8 bits (125), Expect = 2e-06 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Frame = +1
Query: 406 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 582 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 583 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGF 669 L F+ A S F + + WLI AF F G+ Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGY 116
>sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 52.8 bits (125), Expect = 2e-06 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Frame = +1
Query: 406 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 582 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 583 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGF 669 L F+ A S F + + WLI AF F G+ Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGY 116
>sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escherichia coli O157:H7 GN=ttdT PE=2 SV=1 Length = 487
Score = 52.8 bits (125), Expect = 2e-06 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Frame = +1
Query: 406 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 582 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 583 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGF 669 L F+ A S F + + WLI AF F G+ Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGY 116
>sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella flexneri GN=ttdT PE=3 SV=1 Length = 487
Score = 52.0 bits (123), Expect = 3e-06 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Frame = +1
Query: 406 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 582 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 583 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGF 669 L F+ A S F + + WLI AF F G+ Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGY 116
>sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escherichia coli (strain K12) GN=ttdT PE=1 SV=2 Length = 487
Score = 52.0 bits (123), Expect = 3e-06 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Frame = +1
Query: 406 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 582 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 583 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGF 669 L F+ A S F + + WLI AF F G+ Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGY 116
>sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escherichia coli (strain UTI89 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 51.6 bits (122), Expect = 4e-06 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 18/106 (16%) Frame = +1
Query: 406 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 582 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPLPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 583 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGF 669 L F+ A S F + + WLI AF F G+ Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGY 116
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LXV3 |
Definition |
tr|Q9LXV3|Q9LXV3_ARATH 2-oxoglutarate/malate translocator-like protein OS=Arabidopsis thaliana |
Align length |
97 |
Score (bit) |
171.0 |
E-value |
4.0e-41 |
Report |
|