DK963275 |
Clone id |
TST39A01NGRL0016_B14 |
Library |
TST39 |
Length |
591 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_B14. 5' end sequence. |
Accession |
DK963275 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GGCCAGCGATGGAGCAGTACAGGTTTCTGCGCCATTTTGACTCGCGAGTGCACGACGGGC TGAACGGACTTAATCCTTTGAGCACGCTTAGCGGTCTCGGCCTGCAGCTCCCCATACCCA TAGACGCGCGTGGCAAGGGCAAAATCGCTCGGGAGGAGGCAGCTCTCGAAACCAAATTAG TAGAGAAGATCCATTCTGGTGACTGGGAGTCTCTCAAGCCCAATTCTGGCAAAACCATCA GTTTAGGTGAGCATCAGATCTCTGTCGGTTTTCGCGACGACACCGATTCTGGCTACCGTA TATGGGAATGGCATGGCCACATCCTCATCTTCGACGATGAAGGTGGTTACTCCCCTGAGT ACATTTATGGTAGCCATTTCCAATCTCTTGACAAGGAGCTTCATAATGAAGACGACGACG ACGACNACGATTTCAATGGGCATATTGATATGGATGACGAGGTCAATCAATTTAGTTATT TTGATGAGAATGTTGATCTATATAGGTATATTGATGAGGATGATGATGTCAATCAACAAG CTCTTTGCGATGGTATTGTGGTCCTAGGCCTTGGTAGTAGTATTATTCCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P33293 |
Definition |
sp|P33293|BAF1_KLUMA Transcription factor BAF1 OS=Kluyveromyces marxianus |
Align length |
66 |
Score (bit) |
32.3 |
E-value |
1.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LFF8 |
Definition |
tr|Q9LFF8|Q9LFF8_ARATH Putative uncharacterized protein F4P12_330 OS=Arabidopsis thaliana |
Align length |
95 |
Score (bit) |
119.0 |
E-value |
1.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963275|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_B14, 5' (591 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LFF8|Q9LFF8_ARATH Putative uncharacterized protein F4P12_33... 119 1e-25 tr|Q8VXU5|Q8VXU5_ARATH AT3g53630/F4P12_330 OS=Arabidopsis thalia... 119 1e-25 tr|Q10N76|Q10N76_ORYSJ Os03g0279600 protein OS=Oryza sativa subs... 115 2e-24 tr|B8AL34|B8AL34_ORYSI Putative uncharacterized protein OS=Oryza... 115 2e-24 tr|A3AGM9|A3AGM9_ORYSJ Putative uncharacterized protein OS=Oryza... 115 2e-24 tr|B6UB08|B6UB08_MAIZE Putative uncharacterized protein OS=Zea m... 114 4e-24 tr|A9PAG3|A9PAG3_POPTR Putative uncharacterized protein OS=Popul... 113 7e-24 tr|A9NN12|A9NN12_PICSI Putative uncharacterized protein OS=Picea... 113 9e-24 tr|A5C253|A5C253_VITVI Putative uncharacterized protein OS=Vitis... 102 2e-20 tr|A9NP94|A9NP94_PICSI Putative uncharacterized protein OS=Picea... 101 4e-20 tr|A9TGD9|A9TGD9_PHYPA Predicted protein (Fragment) OS=Physcomit... 100 5e-20 tr|A9P034|A9P034_PICSI Putative uncharacterized protein OS=Picea... 100 6e-20 tr|A9SKZ1|A9SKZ1_PHYPA Predicted protein (Fragment) OS=Physcomit... 96 2e-18 tr|A9T9V9|A9T9V9_PHYPA Predicted protein OS=Physcomitrella paten... 92 2e-17 tr|B4JD36|B4JD36_DROGR GH10066 OS=Drosophila grimshawi GN=GH1006... 37 0.65 tr|Q4SKQ7|Q4SKQ7_TETNG Chromosome undetermined SCAF14565, whole ... 36 1.9 tr|A8Y4F1|A8Y4F1_CAEBR Putative uncharacterized protein OS=Caeno... 36 1.9 tr|Q9S0R8|Q9S0R8_STRAW Type I polyketide synthase AVES 1 OS=Stre... 35 4.2 tr|B3CUZ8|B3CUZ8_ORITI Zinc/manganese ABC transporter permease p... 35 4.2 tr|Q38C92|Q38C92_9TRYP Putative uncharacterized protein OS=Trypa... 35 4.2 tr|B0W9K4|B0W9K4_CULQU Putative uncharacterized protein OS=Culex... 35 4.2 tr|B8Y4R0|B8Y4R0_9ACTO Glucose-6-phosphate isomerase (Fragment) ... 34 5.4 tr|B3MR08|B3MR08_DROAN GF21193 OS=Drosophila ananassae GN=GF2119... 34 5.5 tr|Q8VKE5|Q8VKE5_MYCTU Putative uncharacterized protein OS=Mycob... 34 7.1 tr|B4JPK7|B4JPK7_DROGR GH13383 OS=Drosophila grimshawi GN=GH1338... 34 7.2 tr|B6YQR6|B6YQR6_AZOPC ABC-type phosphate transporter substrate-... 33 9.2 tr|A7HG38|A7HG38_ANADF Endonuclease/exonuclease/phosphatase OS=A... 33 9.2 tr|B7FUD0|B7FUD0_PHATR Predicted protein OS=Phaeodactylum tricor... 33 9.2 tr|Q7PJK1|Q7PJK1_ANOGA AGAP010303-PA (Fragment) OS=Anopheles gam... 33 9.2 tr|A7T4T4|A7T4T4_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 9.2
>tr|Q9LFF8|Q9LFF8_ARATH Putative uncharacterized protein F4P12_330 OS=Arabidopsis thaliana GN=F4P12_330 PE=4 SV=1 Length = 210
Score = 119 bits (298), Expect = 1e-25 Identities = 51/95 (53%), Positives = 71/95 (74%) Frame = +3
Query: 123 DARGKGKIAREEAALETKLVEKIHSGDWESLKPNSGKTISLGEHQISVGFRDDTDSGYRI 302 D G+ + REEA LE +L+ I SG +SLKPNSG+ +++ EH I VGF +D +S YR+ Sbjct: 51 DGEGQTSLDREEARLEKELIRVIVSGRSDSLKPNSGQAVTVNEHHICVGFHEDEESDYRV 110
Query: 303 WEWHGHILIFDDEGGYSPEYIYGSHFQSLDKELHN 407 WEWHGHI++FD+E GY+PEYIYG++F+ L +L N Sbjct: 111 WEWHGHIMLFDEENGYTPEYIYGNYFERLPVKLPN 145
>tr|Q8VXU5|Q8VXU5_ARATH AT3g53630/F4P12_330 OS=Arabidopsis thaliana GN=At3g53630 PE=2 SV=1 Length = 194
Score = 119 bits (298), Expect = 1e-25 Identities = 51/95 (53%), Positives = 71/95 (74%) Frame = +3
Query: 123 DARGKGKIAREEAALETKLVEKIHSGDWESLKPNSGKTISLGEHQISVGFRDDTDSGYRI 302 D G+ + REEA LE +L+ I SG +SLKPNSG+ +++ EH I VGF +D +S YR+ Sbjct: 51 DGEGQTSLDREEARLEKELIRVIVSGRSDSLKPNSGQAVTVNEHHICVGFHEDEESDYRV 110
Query: 303 WEWHGHILIFDDEGGYSPEYIYGSHFQSLDKELHN 407 WEWHGHI++FD+E GY+PEYIYG++F+ L +L N Sbjct: 111 WEWHGHIMLFDEENGYTPEYIYGNYFERLPVKLPN 145
>tr|Q10N76|Q10N76_ORYSJ Os03g0279600 protein OS=Oryza sativa subsp. japonica GN=Os03g0279600 PE=2 SV=1 Length = 247
Score = 115 bits (288), Expect = 2e-24 Identities = 50/90 (55%), Positives = 71/90 (78%), Gaps = 1/90 (1%) Frame = +3
Query: 123 DARGKGKIAREEAALETKLVEKIHSGDWE-SLKPNSGKTISLGEHQISVGFRDDTDSGYR 299 +AR + +AREEA LE ++V + +G+ E +LKPNSG+++++G+H I VGF DD+ YR Sbjct: 95 EARRRRTLAREEAKLEKEIVRLVLAGEAEEALKPNSGQSVAVGDHHICVGFHDDSGGVYR 154
Query: 300 IWEWHGHILIFDDEGGYSPEYIYGSHFQSL 389 +WEWHGH++IFDDE GYS EYIYG+HF+ L Sbjct: 155 VWEWHGHVMIFDDEDGYSAEYIYGNHFEPL 184
>tr|B8AL34|B8AL34_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11010 PE=4 SV=1 Length = 597
Score = 115 bits (288), Expect = 2e-24 Identities = 50/90 (55%), Positives = 71/90 (78%), Gaps = 1/90 (1%) Frame = +3
Query: 123 DARGKGKIAREEAALETKLVEKIHSGDWE-SLKPNSGKTISLGEHQISVGFRDDTDSGYR 299 +AR + +AREEA LE ++V + +G+ E +LKPNSG+++++G+H I VGF DD+ YR Sbjct: 95 EARRRRTLAREEAKLEKEIVRLVLAGEAEEALKPNSGQSVAVGDHHICVGFHDDSGGVYR 154
Query: 300 IWEWHGHILIFDDEGGYSPEYIYGSHFQSL 389 +WEWHGH++IFDDE GYS EYIYG+HF+ L Sbjct: 155 VWEWHGHVMIFDDEDGYSAEYIYGNHFEPL 184
>tr|A3AGM9|A3AGM9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009951 PE=4 SV=1 Length = 249
Score = 115 bits (288), Expect = 2e-24 Identities = 50/90 (55%), Positives = 71/90 (78%), Gaps = 1/90 (1%) Frame = +3
Query: 123 DARGKGKIAREEAALETKLVEKIHSGDWE-SLKPNSGKTISLGEHQISVGFRDDTDSGYR 299 +AR + +AREEA LE ++V + +G+ E +LKPNSG+++++G+H I VGF DD+ YR Sbjct: 95 EARRRRTLAREEAKLEKEIVRLVLAGEAEEALKPNSGQSVAVGDHHICVGFHDDSGGVYR 154
Query: 300 IWEWHGHILIFDDEGGYSPEYIYGSHFQSL 389 +WEWHGH++IFDDE GYS EYIYG+HF+ L Sbjct: 155 VWEWHGHVMIFDDEDGYSAEYIYGNHFEPL 184
>tr|B6UB08|B6UB08_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 267
Score = 114 bits (285), Expect = 4e-24 Identities = 49/90 (54%), Positives = 69/90 (76%), Gaps = 1/90 (1%) Frame = +3
Query: 123 DARGKGKIAREEAALETKLVEKIHSGDWES-LKPNSGKTISLGEHQISVGFRDDTDSGYR 299 +AR + +AREEA LE ++V + +G+ E LKPNSG+++++G+H + VGF DD YR Sbjct: 114 EARRRRMLAREEAKLEKEIVRMVLAGEAEDKLKPNSGQSVAVGDHHLCVGFHDDASGEYR 173
Query: 300 IWEWHGHILIFDDEGGYSPEYIYGSHFQSL 389 IWEWHGH+++FDDE GYS EYIYG+HF+ L Sbjct: 174 IWEWHGHVMLFDDEEGYSAEYIYGNHFEPL 203
>tr|A9PAG3|A9PAG3_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 201
Score = 113 bits (283), Expect = 7e-24 Identities = 46/89 (51%), Positives = 69/89 (77%) Frame = +3
Query: 123 DARGKGKIAREEAALETKLVEKIHSGDWESLKPNSGKTISLGEHQISVGFRDDTDSGYRI 302 D K ++++EE+ LE +++ I SG +SLKPNSG+ +++GEH I VGF ++ S YR+ Sbjct: 51 DDTNKTQLSKEESKLEKEIIRVILSGKIDSLKPNSGQAVTIGEHHICVGFHEEQGSDYRV 110
Query: 303 WEWHGHILIFDDEGGYSPEYIYGSHFQSL 389 WEWHGHI++FD+E GY+PEYIYG++F+ L Sbjct: 111 WEWHGHIMLFDEEDGYTPEYIYGNYFERL 139
>tr|A9NN12|A9NN12_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 185
Score = 113 bits (282), Expect = 9e-24 Identities = 58/128 (45%), Positives = 80/128 (62%), Gaps = 5/128 (3%) Frame = +3
Query: 15 QYRFLRHFDSRVHDG----LNGLNP-LSTLSGLGLQLPIPIDARGKGKIAREEAALETKL 179 QY FDS V LN +P L T S + I K + REEA LE + Sbjct: 4 QYSPKNSFDSLVMSTMMSRLNMRSPYLDTNSFMSNAYDRIIADESKSPLQREEAKLEKNI 63
Query: 180 VEKIHSGDWESLKPNSGKTISLGEHQISVGFRDDTDSGYRIWEWHGHILIFDDEGGYSPE 359 V+ I SGD LKPNSG+ +++G+HQ+ VGF +D++ GYR+WEWHGHI+++D+E GY+ E Sbjct: 64 VQIISSGDTGELKPNSGQAVTIGDHQVCVGFHEDSEPGYRVWEWHGHIMLYDEEKGYTAE 123
Query: 360 YIYGSHFQ 383 YIYG+ F+ Sbjct: 124 YIYGNFFE 131
>tr|A5C253|A5C253_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022420 PE=4 SV=1 Length = 164
Score = 102 bits (253), Expect = 2e-20 Identities = 46/114 (40%), Positives = 73/114 (64%) Frame = +3
Query: 69 LNPLSTLSGLGLQLPIPIDARGKGKIAREEAALETKLVEKIHSGDWESLKPNSGKTISLG 248 L L L L Q+P G+IA EEA +E ++E I G ++LKPNSG+ I +G Sbjct: 10 LQSLRPLHHLPSQIPKHNPIDNTGQIAIEEAKIEKAIIEAITRGKAQTLKPNSGEAIPIG 69
Query: 249 EHQISVGFRDDTDSGYRIWEWHGHILIFDDEGGYSPEYIYGSHFQSLDKELHNE 410 EH I V F+D+ +S R+WEWHGHI+ ++ E GY+ +Y+YG++F+ + + + ++ Sbjct: 70 EHYICVSFQDEAESECRVWEWHGHIMSYNGEHGYTQDYVYGNYFERMTRRVFSD 123
>tr|A9NP94|A9NP94_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 175
Score = 101 bits (251), Expect = 4e-20 Identities = 54/146 (36%), Positives = 79/146 (54%) Frame = +3
Query: 120 IDARGKGKIAREEAALETKLVEKIHSGDWESLKPNSGKTISLGEHQISVGFRDDTDSGYR 299 I+ K KIA+E A LE K+V I SG + LKPNS +++ +G H I V + +SGYR Sbjct: 43 IEDECKSKIAKETAKLEQKIVRMILSGKGDELKPNSCQSVEVGGHHICVASTEKVESGYR 102
Query: 300 IWEWHGHILIFDDEGGYSPEYIYGSHFQSLDKELHNEXXXXXXXXXXXXXXXXEVNQFSY 479 +W+WHGHI+++D+E G+ EYIYG++FQ L+ N Sbjct: 103 VWQWHGHIMLYDEEKGFRLEYIYGNYFQRLEAVDDNVEAEKDA----------------- 145
Query: 480 FDENVDLYRYIDEDDDVNQQALCDGI 557 EN L +++ D+VN + LC I Sbjct: 146 --ENSVLRELMEKADEVNARILCRNI 169
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