DK963247 |
Clone id |
TST39A01NGRL0016_A09 |
Library |
TST39 |
Length |
624 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0016_A09. 5' end sequence. |
Accession |
DK963247 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CTTGGGGTACTAAGGCCAACACCAGTAGGTACTACAACAGGGGCTCAAAAGGCTTCAGTC TTTTACATTTCACGTTCAAGACCGAGGCACAGTAGAAGTACAGATCCAAGGGAGATGATG AACTACCCTACCCCTCAGCGAAATGGCAGAGCAGCTTCAGAGAAGTAGTCACAACAAGGT GCTTGTTTAGTTACTTCCTCTTTGGATGCTGGCTTGAAATTGAAAGCTTATCAGATTAAC AGGGGCTCACGTAGTGGTACTTGATTGATGATAAACTGTTGGATCATGCTTGCAAAAAGC ACAGCCATCGTTATGTCAGAATGATACTTGATTGATGTCAATTGTTGGATCCAACTTGCA TCTGCAGAGGAAAAGTGCAGCCATATTTTTGTCAAAATGATACTTGATTGATGTCAAGTG TAGGATCTTACTTGCATCTCTGAATAAGCGCAGCCATATTTGTATCAGAATGATGCATGA AGCTGATTCTCGTATTACCCCGGACATCGAAAAGAAATTTGTGCATGGGGTTTACGACGC AATTGCACCTCATTTTAGTTCCACACGGTTTGCCAAGTGGCCTAAAGTTGCCAGCTTTCT GGAGTCCTTACTACCAGGCTCTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q07G10 |
Definition |
sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis |
Align length |
39 |
Score (bit) |
52.0 |
E-value |
2.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6Z8K5 |
Definition |
tr|Q6Z8K5|Q6Z8K5_ORYSJ Os02g0750500 protein OS=Oryza sativa subsp. japonica |
Align length |
42 |
Score (bit) |
80.5 |
E-value |
7.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963247|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0016_A09, 5' (624 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6Z8K5|Q6Z8K5_ORYSJ Os02g0750500 protein OS=Oryza sativa subs... 80 7e-14 tr|B8AIR5|B8AIR5_ORYSI Putative uncharacterized protein OS=Oryza... 80 7e-14 tr|A3ABE2|A3ABE2_ORYSJ Putative uncharacterized protein OS=Oryza... 80 7e-14 tr|Q9C8X9|Q9C8X9_ARATH Putative uncharacterized protein F7F23.3 ... 78 5e-13 tr|Q94A09|Q94A09_ARATH Putative uncharacterized protein At1g3631... 78 5e-13 tr|Q8LB98|Q8LB98_ARATH Putative uncharacterized protein OS=Arabi... 78 5e-13 tr|B6STS9|B6STS9_MAIZE Putative uncharacterized protein OS=Zea m... 78 5e-13 tr|A7NV38|A7NV38_VITVI Chromosome chr18 scaffold_1, whole genome... 76 1e-12 tr|A9SSR3|A9SSR3_PHYPA Predicted protein OS=Physcomitrella paten... 73 2e-11 tr|A0D9E2|A0D9E2_PARTE Chromosome undetermined scaffold_42, whol... 60 1e-07 tr|A0C0I0|A0C0I0_PARTE Chromosome undetermined scaffold_14, whol... 60 1e-07 tr|B2B0M7|B2B0M7_PODAN Predicted CDS Pa_3_6660 OS=Podospora anse... 60 1e-07 tr|Q24DN2|Q24DN2_TETTH Putative uncharacterized protein OS=Tetra... 56 2e-06 tr|Q17MR7|Q17MR7_AEDAE Putative uncharacterized protein OS=Aedes... 55 3e-06 tr|Q4SEM2|Q4SEM2_TETNG Chromosome 10 SCAF14616, whole genome sho... 55 4e-06 tr|Q2GNV0|Q2GNV0_CHAGB Putative uncharacterized protein OS=Chaet... 54 1e-05 tr|B5X3P4|B5X3P4_SALSA Methyltransferase KIAA1456 OS=Salmo salar... 53 1e-05 tr|Q5KEJ8|Q5KEJ8_CRYNE Putative uncharacterized protein OS=Crypt... 53 1e-05 tr|Q55NW3|Q55NW3_CRYNE Putative uncharacterized protein OS=Crypt... 53 1e-05 tr|B6NU72|B6NU72_BRAFL Putative uncharacterized protein OS=Branc... 52 2e-05 tr|B6N4S5|B6N4S5_BRAFL Putative uncharacterized protein OS=Branc... 52 2e-05 tr|A4HPD1|A4HPD1_LEIBR Putative uncharacterized protein OS=Leish... 52 2e-05 tr|Q4Q1F6|Q4Q1F6_LEIMA Putative uncharacterized protein (Excrete... 52 4e-05 tr|Q96U55|Q96U55_NEUCR Putative uncharacterized protein B24P11.0... 52 4e-05 tr|B6KHB7|B6KHB7_TOXGO Putative uncharacterized protein OS=Toxop... 51 5e-05 tr|B6AHK7|B6AHK7_9CRYT Putative uncharacterized protein OS=Crypt... 51 5e-05 tr|A4ICH1|A4ICH1_LEIIN Putative uncharacterized protein OS=Leish... 51 6e-05 tr|Q4WJ17|Q4WJ17_ASPFU Putative uncharacterized protein OS=Asper... 51 6e-05 tr|A7E978|A7E978_SCLS1 Putative uncharacterized protein OS=Scler... 51 6e-05 tr|Q8BY60|Q8BY60_MOUSE Putative uncharacterized protein (Fragmen... 50 1e-04
>tr|Q6Z8K5|Q6Z8K5_ORYSJ Os02g0750500 protein OS=Oryza sativa subsp. japonica GN=P0431B06.15 PE=2 SV=1 Length = 367
Score = 80.5 bits (197), Expect = 7e-14 Identities = 37/42 (88%), Positives = 38/42 (90%) Frame = +2
Query: 497 TPDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 TPDIEKK+VH VYDAIAPHFSSTRFAKWPKVA FL SL PGS Sbjct: 62 TPDIEKKYVHRVYDAIAPHFSSTRFAKWPKVAGFLNSLRPGS 103
>tr|B8AIR5|B8AIR5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08952 PE=4 SV=1 Length = 327
Score = 80.5 bits (197), Expect = 7e-14 Identities = 37/42 (88%), Positives = 38/42 (90%) Frame = +2
Query: 497 TPDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 TPDIEKK+VH VYDAIAPHFSSTRFAKWPKVA FL SL PGS Sbjct: 22 TPDIEKKYVHRVYDAIAPHFSSTRFAKWPKVAGFLNSLRPGS 63
>tr|A3ABE2|A3ABE2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008114 PE=4 SV=1 Length = 529
Score = 80.5 bits (197), Expect = 7e-14 Identities = 37/42 (88%), Positives = 38/42 (90%) Frame = +2
Query: 497 TPDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 TPDIEKK+VH VYDAIAPHFSSTRFAKWPKVA FL SL PGS Sbjct: 224 TPDIEKKYVHRVYDAIAPHFSSTRFAKWPKVAGFLNSLRPGS 265
>tr|Q9C8X9|Q9C8X9_ARATH Putative uncharacterized protein F7F23.3 OS=Arabidopsis thaliana GN=F7F23.3 PE=4 SV=1 Length = 384
Score = 77.8 bits (190), Expect = 5e-13 Identities = 36/42 (85%), Positives = 39/42 (92%) Frame = +2
Query: 497 TPDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 TP+IEKK+VH VYDAIAPHFSSTRFAKWPKVA+FLESL GS Sbjct: 68 TPEIEKKYVHRVYDAIAPHFSSTRFAKWPKVAAFLESLPSGS 109
>tr|Q94A09|Q94A09_ARATH Putative uncharacterized protein At1g36310 OS=Arabidopsis thaliana GN=At1g36310 PE=2 SV=1 Length = 404
Score = 77.8 bits (190), Expect = 5e-13 Identities = 36/42 (85%), Positives = 39/42 (92%) Frame = +2
Query: 497 TPDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 TP+IEKK+VH VYDAIAPHFSSTRFAKWPKVA+FLESL GS Sbjct: 68 TPEIEKKYVHRVYDAIAPHFSSTRFAKWPKVAAFLESLPSGS 109
>tr|Q8LB98|Q8LB98_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 376
Score = 77.8 bits (190), Expect = 5e-13 Identities = 36/42 (85%), Positives = 39/42 (92%) Frame = +2
Query: 497 TPDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 TP+IEKK+VH VYDAIAPHFSSTRFAKWPKVA+FLESL GS Sbjct: 40 TPEIEKKYVHRVYDAIAPHFSSTRFAKWPKVAAFLESLPSGS 81
>tr|B6STS9|B6STS9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 383
Score = 77.8 bits (190), Expect = 5e-13 Identities = 35/42 (83%), Positives = 38/42 (90%) Frame = +2
Query: 497 TPDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 TP+IEKK+VH VYDAIAPHFS+TRFAKWPKVA FL SL PGS Sbjct: 80 TPEIEKKYVHRVYDAIAPHFSATRFAKWPKVAGFLNSLRPGS 121
>tr|A7NV38|A7NV38_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015288001 PE=4 SV=1 Length = 347
Score = 76.3 bits (186), Expect = 1e-12 Identities = 35/42 (83%), Positives = 39/42 (92%) Frame = +2
Query: 497 TPDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 TP+IEKK+VH VYDAIAPHFSSTRFAKWPKVA+FL+SL GS Sbjct: 36 TPEIEKKYVHHVYDAIAPHFSSTRFAKWPKVATFLKSLPSGS 77
>tr|A9SSR3|A9SSR3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_106932 PE=4 SV=1 Length = 329
Score = 72.8 bits (177), Expect = 2e-11 Identities = 32/41 (78%), Positives = 37/41 (90%) Frame = +2
Query: 500 PDIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 P+IEK++VH VY+AIAPHFS TRFAKWPKVA FLES+ PGS Sbjct: 13 PEIEKRYVHKVYNAIAPHFSDTRFAKWPKVAMFLESMEPGS 53
>tr|A0D9E2|A0D9E2_PARTE Chromosome undetermined scaffold_42, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00014589001 PE=4 SV=1 Length = 636
Score = 60.1 bits (144), Expect = 1e-07 Identities = 24/40 (60%), Positives = 33/40 (82%) Frame = +2
Query: 503 DIEKKFVHGVYDAIAPHFSSTRFAKWPKVASFLESLLPGS 622 ++EKK+V+ +Y+ IAPHFSSTR+ WPK+ FL+SL PGS Sbjct: 409 EVEKKYVYEIYEKIAPHFSSTRYKPWPKIEQFLKSLEPGS 448
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