DK963075 |
Clone id |
TST39A01NGRL0015_I24 |
Library |
TST39 |
Length |
621 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_I24. 5' end sequence. |
Accession |
DK963075 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GTTTTGAACAACCCATCAAGAGAAGAACTTAGCAGCGCGTAGCCACGGAGGGAGAGGAGG CAACCCGAATGGCGCAGGAAAGCGCCCAACAGCCAATGGCAGCGGGTGGGCCAACGCCAA CCAACGGCATATCGGGAGTTCCAATTGGGCAGTCAGTAATTCCTTTGGTAAACAAGCTTC AAGACATCTTCTCGCAGCTGGGCAGTGCTTCCACCATTGATCTCCCCCAGGTTGCAGTCA TTGGAAGCCAGAGTAGCGGAAAATCTAGCGTCCTCGAAGCCCTTGTTGGCCGAGATTTCC TCCCCCGAGGATCTGACATTTGCACTCGGAGACCCCTTGTCTTGCAGCTTGTCCAATTAG TTCGCAGACCCGATGACAAGTCTGATGTCATGGAATGGGGTGAGTTTTTGCACACTCCGG GAAAGCGCTACACAGATTTCTCTCTCATACGGAAGGAGATTCAGGCTGAAACTGAGAGGG AGCTTGGATCCAATAGAGGCATTTCAGACAAGCAAATTCGTTTGAAAATTTTCTCACCAA GTGTGCTGAACATTACTCTCGTGGACCTTCCGGGCATCACCAAGGTCCCTGTTGGCGATC AGCCAAGTGACATTGAGGCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8S944 |
Definition |
sp|Q8S944|DRP3A_ARATH Dynamin-related protein 3A OS=Arabidopsis thaliana |
Align length |
177 |
Score (bit) |
218.0 |
E-value |
3.0e-56 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TFT4 |
Definition |
tr|A9TFT4|A9TFT4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
170 |
Score (bit) |
250.0 |
E-value |
5.0e-65 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963075|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_I24, 5' (621 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TFT4|A9TFT4_PHYPA Predicted protein OS=Physcomitrella paten... 250 5e-65 tr|A9T992|A9T992_PHYPA Predicted protein OS=Physcomitrella paten... 249 7e-65 tr|A9S5G0|A9S5G0_PHYPA Predicted protein OS=Physcomitrella paten... 249 7e-65 tr|A9SIF8|A9SIF8_PHYPA Predicted protein OS=Physcomitrella paten... 244 4e-63 tr|A3A100|A3A100_ORYSJ Putative uncharacterized protein OS=Oryza... 235 2e-60 tr|Q5JJJ5|Q5JJJ5_ORYSJ Putative dynamin like protein 2a (Os01g09... 234 3e-60 tr|B8A8F0|B8A8F0_ORYSI Putative uncharacterized protein OS=Oryza... 233 9e-60 tr|A7QM20|A7QM20_VITVI Chromosome undetermined scaffold_123, who... 233 9e-60 tr|A2Q1P0|A2Q1P0_MEDTR Dynamin central region; Dynamin OS=Medica... 217 5e-55 tr|Q3EC12|Q3EC12_ARATH Uncharacterized protein At2g14120.2 OS=Ar... 211 4e-53 tr|Q7XS31|Q7XS31_ORYSJ OSJNBa0072D21.2 protein OS=Oryza sativa s... 197 5e-49 tr|Q0JDS3|Q0JDS3_ORYSJ Os04g0381000 protein OS=Oryza sativa subs... 197 5e-49 tr|A4RRG7|A4RRG7_OSTLU Predicted protein OS=Ostreococcus lucimar... 191 3e-47 tr|A8J6K6|A8J6K6_CHLRE Dynamin-related GTPase OS=Chlamydomonas r... 190 5e-47 tr|Q66S19|Q66S19_OIKDI Dynamin-1 OS=Oikopleura dioica GN=008-37 ... 181 2e-44 tr|A3F4W8|A3F4W8_TAEAS Dynamin 1 (Fragment) OS=Taenia asiatica P... 181 4e-44 tr|B6HJ22|B6HJ22_PENCH Pc21g15090 protein OS=Penicillium chrysog... 180 5e-44 tr|Q4SP18|Q4SP18_TETNG Chromosome 15 SCAF14542, whole genome sho... 180 7e-44 tr|Q06DV7|Q06DV7_LYMST Dynamin isoform A (Fragment) OS=Lymnaea s... 179 1e-43 tr|B3RPC4|B3RPC4_TRIAD Putative uncharacterized protein OS=Trich... 178 3e-43 tr|B8AT28|B8AT28_ORYSI Putative uncharacterized protein OS=Oryza... 177 4e-43 tr|B7PM12|B7PM12_IXOSC Dynamin, putative OS=Ixodes scapularis GN... 177 4e-43 tr|B7G3L7|B7G3L7_PHATR Predicted protein OS=Phaeodactylum tricor... 176 8e-43 tr|B6MWU8|B6MWU8_BRAFL Putative uncharacterized protein OS=Branc... 176 8e-43 tr|B6MWS3|B6MWS3_BRAFL Putative uncharacterized protein OS=Branc... 176 8e-43 tr|A5PKP8|A5PKP8_XENLA LOC100101298 protein OS=Xenopus laevis GN... 176 1e-42 tr|A8NFI2|A8NFI2_BRUMA Dynamin, putative OS=Brugia malayi GN=Bm1... 176 1e-42 tr|A5AAF2|A5AAF2_ASPNC Contig An02c0310, complete genome OS=Aspe... 176 1e-42 tr|Q8X230|Q8X230_EMENI VpsA (Putative uncharacterized protein) O... 175 2e-42 tr|Q5RHR9|Q5RHR9_DANRE Novel protein similar to vertebrate dynam... 175 2e-42
>tr|A9TFT4|A9TFT4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169834 PE=3 SV=1 Length = 872
Score = 250 bits (638), Expect = 5e-65 Identities = 125/170 (73%), Positives = 144/170 (84%) Frame = +3
Query: 111 PTPTNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGSQSSGKSSVLEALVG 290 P +S +G +VIPLVNKLQDIFSQLGSASTIDLPQVAV+GSQSSGKSSVLEALVG Sbjct: 22 PAAPTSVSTPFLGDAVIPLVNKLQDIFSQLGSASTIDLPQVAVVGSQSSGKSSVLEALVG 81
Query: 291 RDFLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKRYTDFSLIRKEIQAE 470 RDFLPRGSDICT +D+++++EWGEFLH PG+R+TDF+ IRKEIQAE Sbjct: 82 RDFLPRGSDICTRRPLVLQLVQTSRRAEDQTELVEWGEFLHIPGRRFTDFAAIRKEIQAE 141
Query: 471 TERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPSDIEA 620 T+RELG+N+GIS+KQIRLKIFSP+VLNITLVDLPGITKVPVGDQP+DIEA Sbjct: 142 TDRELGTNKGISEKQIRLKIFSPNVLNITLVDLPGITKVPVGDQPNDIEA 191
>tr|A9T992|A9T992_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_142116 PE=3 SV=1 Length = 766
Score = 249 bits (637), Expect = 7e-65 Identities = 125/171 (73%), Positives = 145/171 (84%), Gaps = 1/171 (0%) Frame = +3
Query: 111 PTPTNGISGVP-IGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGSQSSGKSSVLEALV 287 P P+ S P +G++VIPLVNKLQDIFSQLGS+S IDLPQVAV+GSQSSGKSSVLEALV Sbjct: 21 PPPSPASSDFPFLGEAVIPLVNKLQDIFSQLGSSSNIDLPQVAVVGSQSSGKSSVLEALV 80
Query: 288 GRDFLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKRYTDFSLIRKEIQA 467 GRDFLPRGSDICT +D+++++EWGEFLH PG+R+TDF IRKEIQA Sbjct: 81 GRDFLPRGSDICTRRPLVLQLVQTSRRPEDRTELLEWGEFLHVPGRRFTDFGAIRKEIQA 140
Query: 468 ETERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPSDIEA 620 ET+RELG+N+GIS+KQIRLKIFSP+VLNITLVDLPGITKVPVGDQP+DIEA Sbjct: 141 ETDRELGTNKGISEKQIRLKIFSPNVLNITLVDLPGITKVPVGDQPTDIEA 191
>tr|A9S5G0|A9S5G0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_124455 PE=3 SV=1 Length = 766
Score = 249 bits (637), Expect = 7e-65 Identities = 125/170 (73%), Positives = 146/170 (85%) Frame = +3
Query: 111 PTPTNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGSQSSGKSSVLEALVG 290 P+PT+ +G++VIPLVNKLQDIFSQLGSASTIDLPQVAV+GSQSSGKSSVLEALVG Sbjct: 17 PSPTSDAFPF-LGEAVIPLVNKLQDIFSQLGSASTIDLPQVAVVGSQSSGKSSVLEALVG 75
Query: 291 RDFLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKRYTDFSLIRKEIQAE 470 RDFLPRGSD+CT +D+++++EWGEFLH PG+R+TDF IRKEIQAE Sbjct: 76 RDFLPRGSDVCTRRPLVLQLVQTSRRPEDRAELVEWGEFLHIPGRRFTDFEAIRKEIQAE 135
Query: 471 TERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPSDIEA 620 T+RELG+N+GIS+KQIRLKIFSP+VLNITLVDLPGITKVPVGDQP+DIEA Sbjct: 136 TDRELGTNKGISEKQIRLKIFSPNVLNITLVDLPGITKVPVGDQPNDIEA 185
>tr|A9SIF8|A9SIF8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_130413 PE=3 SV=1 Length = 778
Score = 244 bits (622), Expect = 4e-63 Identities = 125/184 (67%), Positives = 145/184 (78%) Frame = +3
Query: 69 MAQESAQQPMAAGGPTPTNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGS 248 MA S +G P + + +GQSVIPLVNKLQDI QLGSASTIDLPQVAV+GS Sbjct: 1 MAPSSEVPGSPSGSPPASPPPAAAFLGQSVIPLVNKLQDILCQLGSASTIDLPQVAVVGS 60
Query: 249 QSSGKSSVLEALVGRDFLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKR 428 QSSGKSSVLEALVG+DFLPR SDICT D+KS+++EWGEFLH PG++ Sbjct: 61 QSSGKSSVLEALVGKDFLPRSSDICTRRPLVLQLVQTLRRSDEKSELVEWGEFLHIPGRQ 120
Query: 429 YTDFSLIRKEIQAETERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPS 608 +T+FS IRKEIQ ETER++G+N+GIS+KQIRLKIFSP VLNITLVDLPGITKVPVGDQP+ Sbjct: 121 FTNFSAIRKEIQLETERDMGTNKGISEKQIRLKIFSPDVLNITLVDLPGITKVPVGDQPT 180
Query: 609 DIEA 620 DIEA Sbjct: 181 DIEA 184
>tr|A3A100|A3A100_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004472 PE=3 SV=1 Length = 799
Score = 235 bits (599), Expect = 2e-60 Identities = 122/176 (69%), Positives = 140/176 (79%), Gaps = 2/176 (1%) Frame = +3
Query: 99 AAGGP--TPTNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGSQSSGKSSV 272 ++ GP T T + +G SVIP+VNKLQDIFSQLGS+STIDLPQVAV+GSQSSGKSSV Sbjct: 7 SSSGPPSTATAAAAAAAVGSSVIPIVNKLQDIFSQLGSSSTIDLPQVAVVGSQSSGKSSV 66
Query: 273 LEALVGRDFLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKRYTDFSLIR 452 LEALVGRDFLPRGSDICT D ++ EWGEFLH PG+R+ DF IR Sbjct: 67 LEALVGRDFLPRGSDICTRRPLVLQLVHQPRRPAD-AEADEWGEFLHLPGRRFYDFREIR 125
Query: 453 KEIQAETERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPSDIEA 620 +EIQAET+RE G N+G+SDKQIRLKI+SP+VLNITLVDLPGITKVPVGDQP+DIEA Sbjct: 126 REIQAETDREAGGNKGVSDKQIRLKIYSPNVLNITLVDLPGITKVPVGDQPTDIEA 181
>tr|Q5JJJ5|Q5JJJ5_ORYSJ Putative dynamin like protein 2a (Os01g0920400 protein) OS=Oryza sativa subsp. japonica GN=B1793G04.8-1 PE=3 SV=1 Length = 818
Score = 234 bits (597), Expect = 3e-60 Identities = 120/169 (71%), Positives = 136/169 (80%) Frame = +3
Query: 114 TPTNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGSQSSGKSSVLEALVGR 293 T T + +G SVIP+VNKLQDIFSQLGS+STIDLPQVAV+GSQSSGKSSVLEALVGR Sbjct: 14 TATAAAAAAAVGSSVIPIVNKLQDIFSQLGSSSTIDLPQVAVVGSQSSGKSSVLEALVGR 73
Query: 294 DFLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKRYTDFSLIRKEIQAET 473 DFLPRGSDICT D ++ EWGEFLH PG+R+ DF IR+EIQAET Sbjct: 74 DFLPRGSDICTRRPLVLQLVHQPRRPAD-AEADEWGEFLHLPGRRFYDFREIRREIQAET 132
Query: 474 ERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPSDIEA 620 +RE G N+G+SDKQIRLKI+SP+VLNITLVDLPGITKVPVGDQP+DIEA Sbjct: 133 DREAGGNKGVSDKQIRLKIYSPNVLNITLVDLPGITKVPVGDQPTDIEA 181
>tr|B8A8F0|B8A8F0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04962 PE=4 SV=1 Length = 857
Score = 233 bits (593), Expect = 9e-60 Identities = 119/167 (71%), Positives = 135/167 (80%) Frame = +3
Query: 120 TNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGSQSSGKSSVLEALVGRDF 299 T + +G SVIP+VNKLQDIFSQLGS+STIDLPQVAV+GSQSSGKSSVLEALVGRDF Sbjct: 18 TAAAAAAAVGSSVIPIVNKLQDIFSQLGSSSTIDLPQVAVVGSQSSGKSSVLEALVGRDF 77
Query: 300 LPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKRYTDFSLIRKEIQAETER 479 LPRGSDICT D ++ EWGEFLH PG+R+ DF IR+EIQAET+R Sbjct: 78 LPRGSDICTRRPLVLQLVHQPRRPAD-AEADEWGEFLHLPGRRFYDFREIRREIQAETDR 136
Query: 480 ELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPSDIEA 620 E G N+G+SDKQIRLKI+SP+VLNITLVDLPGITKVPVGDQP+DIEA Sbjct: 137 EAGGNKGVSDKQIRLKIYSPNVLNITLVDLPGITKVPVGDQPTDIEA 183
>tr|A7QM20|A7QM20_VITVI Chromosome undetermined scaffold_123, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001878001 PE=3 SV=1 Length = 828
Score = 233 bits (593), Expect = 9e-60 Identities = 124/184 (67%), Positives = 144/184 (78%) Frame = +3
Query: 69 MAQESAQQPMAAGGPTPTNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGS 248 MA+E+ + PT ++ S P+G SVIP+VNKLQDIF+QLGS STI+LPQVAV+GS Sbjct: 1 MAEEAV-----SSNPTHSSS-SAAPLGHSVIPIVNKLQDIFAQLGSQSTIELPQVAVVGS 54
Query: 249 QSSGKSSVLEALVGRDFLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKR 428 QSSGKSSVLEALVGRDFLPRGSDICT D + E+GEFLH PGK+ Sbjct: 55 QSSGKSSVLEALVGRDFLPRGSDICTRRPLVLQLLQTKRRPDGSEE--EYGEFLHLPGKK 112
Query: 429 YTDFSLIRKEIQAETERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPS 608 + DFS IR+EIQAET+RE G N+G+SDKQIRLKIFSP+VL+ITLVDLPGITKVPVGDQPS Sbjct: 113 FFDFSEIRREIQAETDREAGENKGVSDKQIRLKIFSPNVLDITLVDLPGITKVPVGDQPS 172
Query: 609 DIEA 620 DIEA Sbjct: 173 DIEA 176
>tr|A2Q1P0|A2Q1P0_MEDTR Dynamin central region; Dynamin OS=Medicago truncatula GN=MtrDRAFT_AC148971g33v2 PE=3 SV=1 Length = 400
Score = 217 bits (552), Expect = 5e-55 Identities = 113/170 (66%), Positives = 132/170 (77%) Frame = +3
Query: 111 PTPTNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGSQSSGKSSVLEALVG 290 P P + VP+G VI LVN+LQDIFS++GS S I+LPQVAV+GSQSSGKSSVLEALVG Sbjct: 9 PPPPPSSAPVPLGSGVISLVNRLQDIFSRVGSQSAINLPQVAVVGSQSSGKSSVLEALVG 68
Query: 291 RDFLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFLHTPGKRYTDFSLIRKEIQAE 470 RDFLPRG++ICT D E+GEFLH PGKR+ DFS IR+EIQAE Sbjct: 69 RDFLPRGNEICTRRPLVLQLVRSSEPAD------EYGEFLHLPGKRFYDFSDIRREIQAE 122
Query: 471 TERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPSDIEA 620 T+RE G N+G+SD+QIRLKI SP+VL++TLVDLPGITKVPVGDQPSDIEA Sbjct: 123 TDREAGDNKGVSDRQIRLKIVSPNVLDMTLVDLPGITKVPVGDQPSDIEA 172
>tr|Q3EC12|Q3EC12_ARATH Uncharacterized protein At2g14120.2 OS=Arabidopsis thaliana GN=At2g14120 PE=3 SV=1 Length = 780
Score = 211 bits (536), Expect = 4e-53 Identities = 114/169 (67%), Positives = 130/169 (76%), Gaps = 1/169 (0%) Frame = +3
Query: 117 PTNGISGVPIGQSVIPLVNKLQDIFSQLGSASTIDLPQVAVIGSQSSGKSSVLEALVGRD 296 P++ + P+G SVIP+VNKLQDIF+QLGS STI LPQVAV+GSQSSGKSSVLEALVGRD Sbjct: 8 PSSASAVTPLGSSVIPIVNKLQDIFAQLGSQSTIALPQVAVVGSQSSGKSSVLEALVGRD 67
Query: 297 FLPRGSDICTXXXXXXXXXXXXXXXDDKSDVMEWGEFL-HTPGKRYTDFSLIRKEIQAET 473 FLPRG+DICT D SD EWGEFL H P +R DFS IR+EI+AET Sbjct: 68 FLPRGNDICTRRPLRLQLVQTKPSSDGGSD-EEWGEFLHHDPVRRIYDFSEIRREIEAET 126
Query: 474 ERELGSNRGISDKQIRLKIFSPSVLNITLVDLPGITKVPVGDQPSDIEA 620 R G N+G+SD I LKIFSP+VL+I+LVDLPGITKVPVGDQPSDIEA Sbjct: 127 NRVSGENKGVSDIPIGLKIFSPNVLDISLVDLPGITKVPVGDQPSDIEA 175
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