DK963064 |
Clone id |
TST39A01NGRL0015_I13 |
Library |
TST39 |
Length |
635 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_I13. 5' end sequence. |
Accession |
DK963064 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2198Contig1 |
Sequence |
CAATCCTCAGATTGAGGGCTATAAATTTGACCCTTATGGAGAATATGTGCGACGATGGTT GCCTGAGTTGTCACGGTTGCCAACTGAGTGGATACATCATCCATGGGATGCGCCTCCTAG TGTGCTTCGTGCTGCTGGAATTGAGCTCGGGTCAAATTATCCAAGGCCCATTGTAGAGAT AGCGGCAGCACGAGAGCGGCTTGAGCAGGCGCTTGCTGAAATGTGGGCAAATGAGGCAGC AGATAAAGCAACTCTGGCAAATGGACTCGAGGAGGGGCTGGGTGATACAGTAGAAGTGCA AGGGATGCGAAATGGGTTTCCTGCCAACATGGATATTGACAGAGGGCCAGGGGAAAAAGC CTTGTTAGTGAGGTCACCGCATGATCAAATGGTACCTAATGTTGGTGTAAGGAGGTCAAC AACAGGAGCGGTTCAAGGGGGCGCAGCCGAACAAGGGAGTGCATTGCAAGCTGTTCTAAG GGAAGTGCCTGCTAATGGGCATGTTCAGGCGGTGCAGGCACAATCTCAAAGGATGGCTGC ACCACCTATGGCTATGCAGAACGAATACGATGACACTCATTCTACCGCTGAATCGACCTC TGCAAGGCATTGGTCTCTAGCTATCGGTCTACCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43125 |
Definition |
sp|Q43125|CRY1_ARATH Cryptochrome-1 OS=Arabidopsis thaliana |
Align length |
217 |
Score (bit) |
155.0 |
E-value |
2.0e-37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O82769 |
Definition |
tr|O82769|O82769_ADICA Blue-light photoreceptor OS=Adiantum capillus-veneris |
Align length |
211 |
Score (bit) |
395.0 |
E-value |
1.0e-108 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963064|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_I13, 5' (635 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|O82769|O82769_ADICA Blue-light photoreceptor OS=Adiantum capi... 395 e-108 tr|Q1EKB9|Q1EKB9_PICAB Putative cryptochrome (Fragment) OS=Picea... 169 2e-40 tr|B8LPX1|B8LPX1_PICSI Putative uncharacterized protein OS=Picea... 169 2e-40 tr|Q1EK82|Q1EK82_PICAB Putative cryptochrome (Fragment) OS=Picea... 168 2e-40 tr|Q1EK81|Q1EK81_PICAB Putative cryptochrome (Fragment) OS=Picea... 165 2e-39 tr|Q1EK83|Q1EK83_PICAB Putative cryptochrome (Fragment) OS=Picea... 164 5e-39 tr|Q8H6B3|Q8H6B3_SORBI Cryptochrome 2 apoprotein OS=Sorghum bico... 160 8e-38 tr|Q5MD22|Q5MD22_SORBI Cryptochrome 2 OS=Sorghum bicolor PE=4 SV=1 160 8e-38 tr|Q1JU52|Q1JU52_BRANA Cryptochrome1 OS=Brassica napus GN=cry1 P... 160 8e-38 tr|Q0GKU4|Q0GKU4_BRACM Cryptochrome 1 protein OS=Brassica campes... 160 8e-38 tr|Q948J4|Q948J4_ORYSJ Cryptochrome 1b OS=Oryza sativa subsp. ja... 157 4e-37 tr|Q7XXN9|Q7XXN9_ORYSJ Cryptochrome OS=Oryza sativa subsp. japon... 157 4e-37 tr|Q7XV36|Q7XV36_ORYSJ OSJNBa0086B14.23 protein OS=Oryza sativa ... 157 4e-37 tr|Q0JCS3|Q0JCS3_ORYSJ Os04g0452100 protein OS=Oryza sativa subs... 157 4e-37 tr|Q01J88|Q01J88_ORYSA H0815C01.8 protein OS=Oryza sativa GN=H08... 157 4e-37 tr|B8AUF2|B8AUF2_ORYSI Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|A3AUD5|A3AUD5_ORYSJ Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|Q9SXI0|Q9SXI0_ORYSJ Blue-light photoreceptor OS=Oryza sativa ... 157 5e-37 tr|Q948J6|Q948J6_ORYSJ Cryptochrome 1a OS=Oryza sativa subsp. ja... 157 5e-37 tr|Q6YXC2|Q6YXC2_ORYSJ Os02g0573200 protein OS=Oryza sativa subs... 157 5e-37 tr|B8AEA9|B8AEA9_ORYSI Putative uncharacterized protein OS=Oryza... 157 5e-37 tr|A3A885|A3A885_ORYSJ Putative uncharacterized protein OS=Oryza... 157 5e-37 tr|A9Q6I8|A9Q6I8_WHEAT Cryptochrome 1a OS=Triticum aestivum GN=C... 157 7e-37 tr|Q2V2M0|Q2V2M0_MARPA Cryptochrome OS=Marchantia paleacea var. ... 156 9e-37 tr|Q2I7L5|Q2I7L5_HORVD Cryptochrome 1a OS=Hordeum vulgare var. d... 156 9e-37 tr|Q2I7K3|Q2I7K3_HORVD Cryptochrome 1a (Fragment) OS=Hordeum vul... 156 9e-37 tr|Q2I7K2|Q2I7K2_HORVD Cryptochrome 1a (Fragment) OS=Hordeum vul... 156 9e-37 tr|Q9SXG9|Q9SXG9_PHYPA Blue light photoreceptor cryptochrome OS=... 154 3e-36 tr|Q948Q6|Q948Q6_PHYPA Blue-light receptor cryptochrome OS=Physc... 154 3e-36 tr|A9RD20|A9RD20_PHYPA Cryptochrome 1a OS=Physcomitrella patens ... 154 3e-36
>tr|O82769|O82769_ADICA Blue-light photoreceptor OS=Adiantum capillus-veneris GN=CRY2 PE=2 SV=1 Length = 679
Score = 395 bits (1014), Expect = e-108 Identities = 194/211 (91%), Positives = 194/211 (91%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIV Sbjct: 416 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVEI 475
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGPGEKA 361 MWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGPGEKA Sbjct: 476 AAARERLEQALAEMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGPGEKA 535
Query: 362 LLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQGSALQAVLREVPANGHVQAVQAQSQRMAA 541 LLVRSPHDQMVPNVGVRRSTTGAVQGGAA QGSALQAVLREVPANGHVQAVQAQSQRMAA Sbjct: 536 LLVRSPHDQMVPNVGVRRSTTGAVQGGAANQGSALQAVLREVPANGHVQAVQAQSQRMAA 595
Query: 542 PPMAMQNEYDDTHSTAESTSARHWSLAIGLP 634 PPMAMQN YDDTHSTAESTSARHWSLAIGLP Sbjct: 596 PPMAMQNGYDDTHSTAESTSARHWSLAIGLP 626
>tr|Q1EKB9|Q1EKB9_PICAB Putative cryptochrome (Fragment) OS=Picea abies GN=cry PE=4 SV=1 Length = 259
Score = 169 bits (427), Expect = 2e-40 Identities = 100/226 (44%), Positives = 127/226 (56%), Gaps = 26/226 (11%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP GEYVRRWLPEL+RLPTEWIHHPWDAP +VL+AAG+ELGSNYP PIV Sbjct: 27 NPQFEGYKFDPAGEYVRRWLPELARLPTEWIHHPWDAPRAVLQAAGVELGSNYPLPIVEI 86
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGP--GE 355 MW EA +A+L NG EEGLG+++E P MD+DR P Sbjct: 87 STAKERLQEGLSEMWQREADARASLENGTEEGLGESLE--NANASLPDQMDVDREPVRNN 144
Query: 356 KALLVRSPHDQMVPNV--GVRRSTTGAVQGGAAEQGSALQAVLREVPAN---GHVQAVQA 520 L RS DQ+VP++ V+R+ G AA + QA EVP+N G A + Sbjct: 145 TDLAARSQDDQLVPSISNAVQRAYVGYTLSQAASSSPSEQA---EVPSNTDSGIASAASS 201
Query: 521 QSQRMAA-------------------PPMAMQNEYDDTHSTAESTS 601 Q + + P M + +E +++HSTA+S+S Sbjct: 202 QQFLVQSTWSMTRGLIEDLPNVTNDYPQMQVLDEQNESHSTADSSS 247
>tr|B8LPX1|B8LPX1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 655
Score = 169 bits (427), Expect = 2e-40 Identities = 100/226 (44%), Positives = 127/226 (56%), Gaps = 26/226 (11%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP GEYVRRWLPEL+RLPTEWIHHPWDAP +VL+AAG+ELGSNYP PIV Sbjct: 410 NPQFEGYKFDPAGEYVRRWLPELARLPTEWIHHPWDAPRAVLQAAGVELGSNYPLPIVEI 469
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGP--GE 355 MW EA +A+L NG EEGLG+++E P MD+DR P Sbjct: 470 STAKERLQEGLSEMWQREADARASLENGTEEGLGESLE--NANASLPDQMDVDREPVRNN 527
Query: 356 KALLVRSPHDQMVPNV--GVRRSTTGAVQGGAAEQGSALQAVLREVPAN---GHVQAVQA 520 L RS DQ+VP++ V+R+ G AA + QA EVP+N G A + Sbjct: 528 TDLAARSQDDQLVPSISNAVQRAYVGYTLSQAASSSPSEQA---EVPSNTDSGIASAASS 584
Query: 521 QSQRMAA-------------------PPMAMQNEYDDTHSTAESTS 601 Q + + P M + +E +++HSTA+S+S Sbjct: 585 QQFLVQSTWSMTRGLIEDLPNVTNDYPQMQVLDEQNESHSTADSSS 630
>tr|Q1EK82|Q1EK82_PICAB Putative cryptochrome (Fragment) OS=Picea abies GN=cry PE=4 SV=1 Length = 259
Score = 168 bits (426), Expect = 2e-40 Identities = 99/226 (43%), Positives = 124/226 (54%), Gaps = 26/226 (11%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP GEYVRRWLPEL+RLPTEWIHHPWDAP +VL+AAG+ELGSNYP PIV Sbjct: 27 NPQFEGYKFDPAGEYVRRWLPELARLPTEWIHHPWDAPRAVLQAAGVELGSNYPLPIVEI 86
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGP--GE 355 MW EA +A+L NG EEGLG+++E P MD+DR P Sbjct: 87 STAKERLQEGLSEMWQREADARASLENGTEEGLGESLE--NANASLPDQMDVDREPVRNN 144
Query: 356 KALLVRSPHDQMVPNV--GVRRSTTGAVQGGAAEQGSALQAVLREVPANGHVQAVQAQSQ 529 L RS DQ+VP++ V+R+ G AA + QA EVP+N A S Sbjct: 145 THLAARSQDDQLVPSISNAVQRAYVGYTLSQAASSSPSEQA---EVPSNTDSGIASAASS 201
Query: 530 RMAA----------------------PPMAMQNEYDDTHSTAESTS 601 + P M + +E +++HSTA+S+S Sbjct: 202 QQFLGQSTWSMTRGLIEDLPNVTNDYPQMQVLDEQNESHSTADSSS 247
>tr|Q1EK81|Q1EK81_PICAB Putative cryptochrome (Fragment) OS=Picea abies GN=cry PE=4 SV=1 Length = 259
Score = 165 bits (418), Expect = 2e-39 Identities = 98/226 (43%), Positives = 123/226 (54%), Gaps = 26/226 (11%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP GEYVRRWLPEL+RLPTEWIHHPWDAP +VL+AAG+ELGSNYP PIV Sbjct: 27 NPQFEGYKFDPAGEYVRRWLPELARLPTEWIHHPWDAPRAVLQAAGVELGSNYPLPIVEI 86
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGP--GE 355 MW EA +A+L NG EEGLG+++E P MD+DR P Sbjct: 87 STAKERLQEGLSEMWQREADARASLENGTEEGLGESLE--NANASLPDQMDVDREPVRNN 144
Query: 356 KALLVRSPHDQMVPNV--GVRRSTTGAVQGGAAEQGSALQAVLREVPANGHVQAVQAQSQ 529 L RS DQ+VP++ V+R+ G AA + QA EVP+N A S Sbjct: 145 THLAARSQDDQLVPSISNAVQRAYVGYTLSQAASSSPSEQA---EVPSNTDSGIASAASS 201
Query: 530 RMAA----------------------PPMAMQNEYDDTHSTAESTS 601 + M + +E +++HSTA+S+S Sbjct: 202 QQFLGQSTWSMTRGLIEDLPNVTNDYAQMQVLDEQNESHSTADSSS 247
>tr|Q1EK83|Q1EK83_PICAB Putative cryptochrome (Fragment) OS=Picea abies GN=cry PE=4 SV=1 Length = 259
Score = 164 bits (414), Expect = 5e-39 Identities = 97/226 (42%), Positives = 122/226 (53%), Gaps = 26/226 (11%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP GEYVRRWLPEL+RLPTEWIHHPWDAP +VL+AAG+ELGSNYP PIV Sbjct: 27 NPQFEGYKFDPAGEYVRRWLPELARLPTEWIHHPWDAPRAVLQAAGVELGSNYPLPIVEI 86
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGP--GE 355 MW E +A+L NG EEGLG+++E P MD+DR P Sbjct: 87 STAKERLQEGLSEMWQRETDARASLENGTEEGLGESLE--NANASLPDQMDVDREPVRNN 144
Query: 356 KALLVRSPHDQMVPNV--GVRRSTTGAVQGGAAEQGSALQAVLREVPANGHVQAVQAQSQ 529 L RS DQ+VP++ V+R+ G AA + QA EVP+N A S Sbjct: 145 THLAARSQDDQLVPSISNAVQRAYVGYTLSQAASSSPSEQA---EVPSNTDSGIASAASS 201
Query: 530 RMAA----------------------PPMAMQNEYDDTHSTAESTS 601 + M + +E +++HSTA+S+S Sbjct: 202 QQFLGQSTWSMTRGLIEDLPNVTNDYAQMQVLDEQNESHSTADSSS 247
>tr|Q8H6B3|Q8H6B3_SORBI Cryptochrome 2 apoprotein OS=Sorghum bicolor GN=cry2 PE=2 SV=1 Length = 691
Score = 160 bits (404), Expect = 8e-38 Identities = 80/136 (58%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP+GEYVRRW+PEL RLPTEWIHHPWDAP SVL+AAGIELGSNYP PIV Sbjct: 424 NPQFEGYKFDPHGEYVRRWIPELVRLPTEWIHHPWDAPVSVLQAAGIELGSNYPLPIVEL 483
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFP--ANMDIDRGPGE 355 MW EAA +AT+ NG+EEGLGD+ EV FP M++DR Sbjct: 484 DAAKARLQEALSEMWQLEAASRATMNNGMEEGLGDSSEVP-----FPEELQMEVDRATAN 538
Query: 356 KALLVRSPHDQMVPNV 403 + VR DQMVP + Sbjct: 539 VVMTVRRREDQMVPTM 554
>tr|Q5MD22|Q5MD22_SORBI Cryptochrome 2 OS=Sorghum bicolor PE=4 SV=1 Length = 690
Score = 160 bits (404), Expect = 8e-38 Identities = 80/136 (58%), Positives = 91/136 (66%), Gaps = 2/136 (1%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP+GEYVRRW+PEL RLPTEWIHHPWDAP SVL+AAGIELGSNYP PIV Sbjct: 423 NPQFEGYKFDPHGEYVRRWIPELVRLPTEWIHHPWDAPVSVLQAAGIELGSNYPLPIVEL 482
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFP--ANMDIDRGPGE 355 MW EAA +AT+ NG+EEGLGD+ EV FP M++DR Sbjct: 483 DAAKARLQEALSEMWQLEAASRATMNNGMEEGLGDSSEVP-----FPEELQMEVDRATAN 537
Query: 356 KALLVRSPHDQMVPNV 403 + VR DQMVP + Sbjct: 538 VVMTVRRREDQMVPTM 553
>tr|Q1JU52|Q1JU52_BRANA Cryptochrome1 OS=Brassica napus GN=cry1 PE=2 SV=1 Length = 680
Score = 160 bits (404), Expect = 8e-38 Identities = 97/213 (45%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP GEYVRRWLPELSRLPTEWIHHPW+AP SVL+AAGIELGSNYPRPIV Sbjct: 416 NPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPRPIVGL 475
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGPGEKA 361 MW EAA +A + NG EEGLGD+ E FP ++ ++ + Sbjct: 476 DEAKARLHEALSQMWQLEAASRAAIENGSEEGLGDSTEFVEAPIEFPRDITMEETEPTRL 535
Query: 362 LLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQGSALQAVLREVPANGHVQAVQAQSQRMAA 541 VR DQMVP++ Q + ++ EVP N V QA+ Q A Sbjct: 536 NPVRRYEDQMVPSITTSLIRPEEDQESSLSLRNSGGDSRAEVPRN-MVNTNQARQQEARA 594
Query: 542 PPM-----AMQNEY-------DDTHSTAESTSA 604 P+ AM E+ + STAES+S+ Sbjct: 595 DPVSNQVTAMIPEFNIRIVAENTEESTAESSSS 627
>tr|Q0GKU4|Q0GKU4_BRACM Cryptochrome 1 protein OS=Brassica campestris GN=cry1 PE=2 SV=1 Length = 704
Score = 160 bits (404), Expect = 8e-38 Identities = 97/213 (45%), Positives = 118/213 (55%), Gaps = 12/213 (5%) Frame = +2
Query: 2 NPQIEGYKFDPYGEYVRRWLPELSRLPTEWIHHPWDAPPSVLRAAGIELGSNYPRPIVXX 181 NPQ EGYKFDP GEYVRRWLPELSRLPTEWIHHPW+AP SVL+AAGIELGSNYPRPIV Sbjct: 440 NPQFEGYKFDPNGEYVRRWLPELSRLPTEWIHHPWNAPESVLQAAGIELGSNYPRPIVGL 499
Query: 182 XXXXXXXXXXXXXMWANEAADKATLANGLEEGLGDTVEVQGMRNGFPANMDIDRGPGEKA 361 MW EAA +A + NG EEGLGD+ E FP ++ ++ + Sbjct: 500 DEAKARLHEALSQMWQLEAASRAAIENGSEEGLGDSTEFVEAPIEFPRDITMEETEPTRL 559
Query: 362 LLVRSPHDQMVPNVGVRRSTTGAVQGGAAEQGSALQAVLREVPANGHVQAVQAQSQRMAA 541 VR DQMVP++ Q + ++ EVP N V QA+ Q A Sbjct: 560 NPVRRYEDQMVPSITTSLIRPEEDQESSLSLRNSGGDSRAEVPRN-MVNTNQARQQEARA 618
Query: 542 PPM-----AMQNEY-------DDTHSTAESTSA 604 P+ AM E+ + STAES+S+ Sbjct: 619 DPVSNQVTAMIPEFNIRIVAENTEESTAESSSS 651
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