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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK963031
Clone id TST39A01NGRL0015_H03
Library
Length 634
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_H03. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CTCTTAACGCGGGGCGGGTCTTTCAGATCTCCATAGCCATTCTTTCCTATAGGCGTAGTA
GCGGCAGAAGATTATAAACGCCCTGGTGCTTTCTATCATCTATTAGATACAGATAAAAAT
TCTCCATAGTCGCGCGTTTTTAAAGGTGTAGCAGAGAGTAGCAGAGGACTCCCTCGCCAT
TCTTATTCTTTTCAAAGGGTGCATTTGCATTGTTGAGAAGCCAAAGAAGGATTTTGGGCG
TGTCAAATCGATCAAATTGTCTGTATATAGCTACCCAGGAGGCTTCTCTTTTTGTTCAGA
TCAGCCATGGGGGAAGAGGATCTGGAGAGAAGAGGCTCTATGCGCCGCCGCAGCAGCAGC
AGCAGCAAGGGAGTCCACCCCGTGCATGATTCGGGGGCCCCTGTATACCTACCAGTCTCG
CAAGGGAGGCGATGGATTCCTCTCCTAATTCCCACCATCGTTGTGGCAAATATTGTCATG
TTTATAATCACCATGTACGTGAATAATTGCCCTGCAAATACTGCCAACGATCAGTGCTTG
GCTAAGTTCCTTAAACGCTTCTCCTTCCAACCATTCAGTGAGAATCCTCTGATAGGACCT
TCGACCCGAGCGTTGCAGCAGGTGGGCGCTCTAG
■■Homology search results ■■ -
sp_hit_id Q9VVV2
Definition sp|Q9VVV2|OSTA_DROME Organic solute transporter alpha-like protein OS=Drosophila melanogaster
Align length 45
Score (bit) 30.8
E-value 6.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963031|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_H03, 5'
         (634 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VVV2|OSTA_DROME Organic solute transporter alpha-like prote...    31   6.1  
sp|A3KFU9|PTHD2_MOUSE Patched domain-containing protein 2 OS=Mus...    30   8.0  

>sp|Q9VVV2|OSTA_DROME Organic solute transporter alpha-like protein
           OS=Drosophila melanogaster GN=CG6836 PE=2 SV=1
          Length = 328

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = -3

Query: 563 EKRLRNLAKH*SLAVFAGQLFTYMVIINMTIFATTMVGIRRGIHR 429
           E+   N+    SLA+F   L T   I+N++IFATT+  +RR + +
Sbjct: 37  EEYYENMTAFLSLAIFIASLLT---ILNISIFATTVSRLRRHLDK 78


>sp|A3KFU9|PTHD2_MOUSE Patched domain-containing protein 2 OS=Mus
           musculus GN=Ptchd2 PE=2 SV=1
          Length = 1347

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = -1

Query: 220 LLNNANAPFEKNKNGEGVLCYSLLHL*KRATMENFYLYLIDDRKHQGVYNL 68
           L NN     EK K G GV   S      + +M   Y+  +  + H  VY L
Sbjct: 752 LQNNVRTSLEKKKRGSGVSWASRTETTAQESMSTVYISKVKSKGHPAVYRL 802
tr_hit_id A7PNN3
Definition tr|A7PNN3|A7PNN3_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera
Align length 77
Score (bit) 101.0
E-value 3.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK963031|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0015_H03, 5'
         (634 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PNN3|A7PNN3_VITVI Chromosome chr8 scaffold_23, whole genome...   101   3e-20
tr|A5AY17|A5AY17_VITVI Putative uncharacterized protein OS=Vitis...   101   3e-20
tr|Q10SN4|Q10SN4_ORYSJ Os03g0116400 protein OS=Oryza sativa subs...    96   2e-18
tr|A2XBS1|A2XBS1_ORYSI Putative uncharacterized protein OS=Oryza...    96   2e-18
tr|A7NYY8|A7NYY8_VITVI Chromosome chr6 scaffold_3, whole genome ...    95   4e-18
tr|A5ATD5|A5ATD5_VITVI Putative uncharacterized protein OS=Vitis...    95   4e-18
tr|A2Z9G1|A2Z9G1_ORYSI Putative uncharacterized protein OS=Oryza...    94   5e-18
tr|B4FQY5|B4FQY5_MAIZE Membrane protein OS=Zea mays PE=2 SV=1          92   3e-17
tr|Q3C2H8|Q3C2H8_ARATH Rhomboid family protein AtRBL1 OS=Arabido...    90   1e-16
tr|Q0WQX7|Q0WQX7_ARATH Putative uncharacterized protein At2g2905...    90   1e-16
tr|B4F7Z2|B4F7Z2_MAIZE Putative uncharacterized protein OS=Zea m...    90   1e-16
tr|B6U8Q7|B6U8Q7_MAIZE Membrane protein OS=Zea mays PE=2 SV=1          90   1e-16
tr|Q651M0|Q651M0_ORYSJ Os09g0525900 protein OS=Oryza sativa subs...    89   2e-16
tr|A2Z3A4|A2Z3A4_ORYSI Putative uncharacterized protein OS=Oryza...    89   2e-16
tr|A6MD08|A6MD08_9ORYZ Membrane protein OS=Oryza brachyantha PE=...    89   2e-16
tr|B4FU25|B4FU25_MAIZE Membrane protein OS=Zea mays PE=2 SV=1          87   6e-16
tr|B4F9P7|B4F9P7_MAIZE Putative uncharacterized protein OS=Zea m...    87   6e-16
tr|Q9LN72|Q9LN72_ARATH T12C24.28 OS=Arabidopsis thaliana PE=4 SV=1     86   2e-15
tr|Q8VZ48|Q8VZ48_ARATH Putative membrane protein OS=Arabidopsis ...    86   2e-15
tr|B4G1H4|B4G1H4_MAIZE Putative uncharacterized protein OS=Zea m...    86   2e-15
tr|Q9M348|Q9M348_ARATH Putative uncharacterized protein F5K20_80...    85   3e-15
tr|Q43323|Q43323_9POAL Membrane protein OS=Saccharum hybrid cult...    85   4e-15
tr|B8LKV6|B8LKV6_PICSI Putative uncharacterized protein OS=Picea...    84   5e-15
tr|A7QVI2|A7QVI2_VITVI Chromosome chr16 scaffold_189, whole geno...    83   1e-14
tr|O81073|O81073_ARATH Putative uncharacterized protein At2g2905...    82   2e-14
tr|B7FIQ5|B7FIQ5_MEDTR Putative uncharacterized protein OS=Medic...    82   2e-14
tr|B6TYI0|B6TYI0_MAIZE Membrane protein OS=Zea mays PE=2 SV=1          82   2e-14
tr|A7QIR1|A7QIR1_VITVI Chromosome chr9 scaffold_104, whole genom...    82   2e-14
tr|Q9CAN1|Q9CAN1_ARATH Membrane protein, putative; 61952-60281 (...    82   3e-14
tr|Q6ZFV7|Q6ZFV7_ORYSJ Os08g0546700 protein OS=Oryza sativa subs...    82   3e-14

>tr|A7PNN3|A7PNN3_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021327001
           PE=4 SV=1
          Length = 388

 Score =  101 bits (252), Expect = 3e-20
 Identities = 47/77 (61%), Positives = 60/77 (77%)
 Frame = +1

Query: 403 VYLPVSQGRRWIPLLIPTIVVANIVMFIITMYVNNCPANTANDQCLAKFLKRFSFQPFSE 582
           VY  +   ++W+P LIP+ VVANI+MF ITMYVNNCP N+ +  C+A FL RFSFQPF E
Sbjct: 44  VYREIKHFKKWVPWLIPSFVVANIIMFGITMYVNNCPKNSIS--CIADFLGRFSFQPFKE 101

Query: 583 NPLIGPSTRALQQVGAL 633
           NPL+GPS+  LQ++GAL
Sbjct: 102 NPLLGPSSSTLQKMGAL 118


>tr|A5AY17|A5AY17_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026278 PE=4 SV=1
          Length = 754

 Score =  101 bits (252), Expect = 3e-20
 Identities = 47/77 (61%), Positives = 60/77 (77%)
 Frame = +1

Query: 403 VYLPVSQGRRWIPLLIPTIVVANIVMFIITMYVNNCPANTANDQCLAKFLKRFSFQPFSE 582
           VY  +   ++W+P LIP+ VVANI+MF ITMYVNNCP N+ +  C+A FL RFSFQPF E
Sbjct: 44  VYREIKHFKKWVPWLIPSFVVANIIMFGITMYVNNCPKNSIS--CIADFLGRFSFQPFKE 101

Query: 583 NPLIGPSTRALQQVGAL 633
           NPL+GPS+  LQ++GAL
Sbjct: 102 NPLLGPSSSTLQKMGAL 118


>tr|Q10SN4|Q10SN4_ORYSJ Os03g0116400 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0116400 PE=2 SV=1
          Length = 325

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 42/81 (51%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
 Frame = +1

Query: 397 APVYLPVSQGRRWIPLLIPTIVVANIVMFIITMYVNNCPANT--ANDQCLAKFLKRFSFQ 570
           +P+Y      R W+P ++P+ +VANIV+F++TMY NNCP +T   + +C+A+FL RFSFQ
Sbjct: 22  SPLYPQHEGEREWVPWIVPSFLVANIVVFVLTMYANNCPLHTPPRSGKCIARFLGRFSFQ 81

Query: 571 PFSENPLIGPSTRALQQVGAL 633
           P  ENPL+GPS+  LQ++GAL
Sbjct: 82  PLHENPLLGPSSATLQKMGAL 102


>tr|A2XBS1|A2XBS1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_09736 PE=4 SV=1
          Length = 325

 Score = 95.9 bits (237), Expect = 2e-18
 Identities = 42/81 (51%), Positives = 61/81 (75%), Gaps = 2/81 (2%)
 Frame = +1

Query: 397 APVYLPVSQGRRWIPLLIPTIVVANIVMFIITMYVNNCPANT--ANDQCLAKFLKRFSFQ 570
           +P+Y      R W+P ++P+ +VANIV+F++TMY NNCP +T   + +C+A+FL RFSFQ
Sbjct: 22  SPLYPQHEGEREWVPWIVPSFLVANIVVFVLTMYANNCPLHTPPRSGKCIARFLGRFSFQ 81

Query: 571 PFSENPLIGPSTRALQQVGAL 633
           P  ENPL+GPS+  LQ++GAL
Sbjct: 82  PLHENPLLGPSSATLQKMGAL 102


>tr|A7NYY8|A7NYY8_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024303001
           PE=4 SV=1
          Length = 391

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +1

Query: 427 RRWIPLLIPTIVVANIVMFIITMYVNNCPANTANDQCLAKFLKRFSFQPFSENPLIGPST 606
           +RW P ++PT VVANI MF+ITM++NNCP N+ +  C+A FL RFSFQP  ENPL+GPS+
Sbjct: 54  KRWFPWMVPTFVVANIAMFLITMFINNCPKNSVS--CVADFLGRFSFQPLKENPLLGPSS 111

Query: 607 RALQQVGAL 633
             L+++GAL
Sbjct: 112 STLEKMGAL 120


>tr|A5ATD5|A5ATD5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_021082 PE=4 SV=1
          Length = 391

 Score = 94.7 bits (234), Expect = 4e-18
 Identities = 41/69 (59%), Positives = 55/69 (79%)
 Frame = +1

Query: 427 RRWIPLLIPTIVVANIVMFIITMYVNNCPANTANDQCLAKFLKRFSFQPFSENPLIGPST 606
           +RW P ++PT VVANI MF+ITM++NNCP N+ +  C+A FL RFSFQP  ENPL+GPS+
Sbjct: 54  KRWFPWMVPTFVVANIAMFLITMFINNCPKNSVS--CVADFLGRFSFQPLKENPLLGPSS 111

Query: 607 RALQQVGAL 633
             L+++GAL
Sbjct: 112 STLEKMGAL 120


>tr|A2Z9G1|A2Z9G1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_34361 PE=4 SV=1
          Length = 332

 Score = 94.4 bits (233), Expect = 5e-18
 Identities = 41/70 (58%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = +1

Query: 427 RRWIPLLIPTIVVANIVMFIITMYVNNCPANTAND-QCLAKFLKRFSFQPFSENPLIGPS 603
           R W+P L+P I+VAN+V+F + MYVNNCP++ +    C+A FL+RFSFQP SENPL+GPS
Sbjct: 40  REWVPWLVPAILVANVVVFAVAMYVNNCPSHASRGGACVAGFLRRFSFQPLSENPLLGPS 99

Query: 604 TRALQQVGAL 633
           +  LQ++GAL
Sbjct: 100 SATLQKMGAL 109


>tr|B4FQY5|B4FQY5_MAIZE Membrane protein OS=Zea mays PE=2 SV=1
          Length = 322

 Score = 91.7 bits (226), Expect = 3e-17
 Identities = 41/79 (51%), Positives = 56/79 (70%)
 Frame = +1

Query: 397 APVYLPVSQGRRWIPLLIPTIVVANIVMFIITMYVNNCPANTANDQCLAKFLKRFSFQPF 576
           +P+Y      R W+P L+P I VA+I +F++TMY NNCPA   N +C+A+FL RFSFQP 
Sbjct: 22  SPLYPQHEGEREWVPWLVPVIFVASITVFVVTMYANNCPARDTN-KCVARFLGRFSFQPL 80

Query: 577 SENPLIGPSTRALQQVGAL 633
            +NPL GPS+  L ++GAL
Sbjct: 81  RQNPLFGPSSATLTKMGAL 99


>tr|Q3C2H8|Q3C2H8_ARATH Rhomboid family protein AtRBL1
           OS=Arabidopsis thaliana GN=AtRBL1 PE=2 SV=1
          Length = 346

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = +1

Query: 433 WIPLLIPTIVVANIVMFIITMYVNNCPANTANDQCLAKFLKRFSFQPFSENPLIGPSTRA 612
           W P L+P IVVANI +F I+M++NNCP N+A   CLA+FL RF+FQP  ENPL+GPS+  
Sbjct: 54  WFPWLVPAIVVANIALFAISMFINNCPKNSA--YCLARFLGRFAFQPMKENPLLGPSSLT 111

Query: 613 LQQVGAL 633
           L+++GAL
Sbjct: 112 LEKMGAL 118


>tr|Q0WQX7|Q0WQX7_ARATH Putative uncharacterized protein At2g29050
           OS=Arabidopsis thaliana GN=At2g29050 PE=2 SV=1
          Length = 389

 Score = 90.1 bits (222), Expect = 1e-16
 Identities = 40/67 (59%), Positives = 53/67 (79%)
 Frame = +1

Query: 433 WIPLLIPTIVVANIVMFIITMYVNNCPANTANDQCLAKFLKRFSFQPFSENPLIGPSTRA 612
           W P L+P IVVANI +F I+M++NNCP N+A   CLA+FL RF+FQP  ENPL+GPS+  
Sbjct: 54  WFPWLVPAIVVANIALFAISMFINNCPKNSA--YCLARFLGRFAFQPMKENPLLGPSSLT 111

Query: 613 LQQVGAL 633
           L+++GAL
Sbjct: 112 LEKMGAL 118