DK963030 |
Clone id |
TST39A01NGRL0015_H02 |
Library |
TST39 |
Length |
630 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_H02. 5' end sequence. |
Accession |
DK963030 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
TGCAATAAAGCCATCAAAGAGGAAAAAGCGTCCAGCAACAGAGGAAAGTCAGAATGTGAT TTCAGATGGCTTGAAACAGCATGGTACTGAAATCATGCATTTGGATGGAGAAAGCCAAGA TGCTATTGATGATGGCGAAGAGACCATGGAAGAGAAGCTAAAAGCTCTAGGGATTATGCC AGACGAAGGGGAGGAGGAAGAAGAAAAACAAGGTTCTGTAGCTCCACTCAAGGCAGATTC TTTGCAAGTACTAATGACACAGGCACTGGAATCTTACGATAAGGCTCTCCTTAAGCAGTG CCTTTCTGTGACAGACAACAAGATCATTGTAAAGACTGTACAAATGCTAAATCCCTCAGT TGCTGCTAAGTTTCTCCAAATGTCAGTTGATAACCTTGATTTAAGAACAGGAAGAGCTCT TGTACTGGTCCCTTGGATAAAAGCTGTCTTACTCTACCATGCGTCATACATTATGTCAAG TCCTTCAATACAACCAATTTTGAGCTCTCTTTACCAGGTCATCGATTCAAGGTTGACAGT TTTTAGACCGCTCTTGTCTCTGTCAGGCCGCCTGGATCTTATAATGGCACAGGTTGCACG TGCGGAGACAACTCAGCAACAAGAAGTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6ZQL4 |
Definition |
sp|Q6ZQL4|WDR43_MOUSE WD repeat-containing protein 43 OS=Mus musculus |
Align length |
203 |
Score (bit) |
80.9 |
E-value |
5.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SWT0 |
Definition |
tr|A9SWT0|A9SWT0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
211 |
Score (bit) |
145.0 |
E-value |
3.0e-33 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK963030|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_H02, 5' (630 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SWT0|A9SWT0_PHYPA Predicted protein OS=Physcomitrella paten... 145 3e-33 tr|A8IVB9|A8IVB9_CHLRE Predicted protein (Fragment) OS=Chlamydom... 103 1e-20 tr|A7P7R4|A7P7R4_VITVI Chromosome chr9 scaffold_7, whole genome ... 99 3e-19 tr|Q5VQD9|Q5VQD9_ORYSJ Putative uncharacterized protein OJ1316_H... 96 1e-18 tr|A2WT83|A2WT83_ORYSI Putative uncharacterized protein OS=Oryza... 96 1e-18 tr|B6SUH5|B6SUH5_MAIZE Putative uncharacterized protein OS=Zea m... 92 3e-17 tr|A9V9R4|A9V9R4_MONBE Predicted protein OS=Monosiga brevicollis... 83 1e-14 tr|A7F9P8|A7F9P8_SCLS1 Putative uncharacterized protein OS=Scler... 82 2e-14 tr|Q2QLN8|Q2QLN8_ORYSJ Os12g0634800 protein OS=Oryza sativa subs... 81 5e-14 tr|A3CJR8|A3CJR8_ORYSJ Putative uncharacterized protein OS=Oryza... 81 5e-14 tr|Q68FC6|Q68FC6_MOUSE Wrd43 protein (Fragment) OS=Mus musculus ... 81 6e-14 tr|B6K0Y4|B6K0Y4_SCHJP U3 small nucleolar RNA-associated protein... 79 2e-13 tr|A6SET2|A6SET2_BOTFB Putative uncharacterized protein OS=Botry... 79 2e-13 tr|B2W667|B2W667_PYRTR U3 small nucleolar RNA-associated protein... 77 1e-12 tr|A8Q8X6|A8Q8X6_MALGO Putative uncharacterized protein OS=Malas... 76 1e-12 tr|Q8JHG6|Q8JHG6_DANRE KIAA0007-like protein OS=Danio rerio GN=w... 76 2e-12 tr|A9JSY2|A9JSY2_DANRE WD repeat domain 43, like OS=Danio rerio ... 76 2e-12 tr|A9JR96|A9JR96_DANRE WD repeat domain 43, like OS=Danio rerio ... 76 2e-12 tr|A5PKP1|A5PKP1_XENLA LOC100101293 protein (Fragment) OS=Xenopu... 74 6e-12 tr|Q8L403|Q8L403_ARATH Putative uncharacterized protein At1g1542... 74 6e-12 tr|Q4SK11|Q4SK11_TETNG Chromosome 10 SCAF14571, whole genome sho... 73 1e-11 tr|B0ELP3|B0ELP3_ENTDI Putative uncharacterized protein OS=Entam... 72 2e-11 tr|Q6C5P8|Q6C5P8_YARLI YALI0E16280p OS=Yarrowia lipolytica GN=YA... 72 2e-11 tr|A8N259|A8N259_COPC7 Putative uncharacterized protein OS=Copri... 72 2e-11 tr|B6M8D8|B6M8D8_BRAFL Putative uncharacterized protein OS=Branc... 72 3e-11 tr|A6QWD1|A6QWD1_AJECN Putative uncharacterized protein OS=Ajell... 72 3e-11 tr|A4RLT9|A4RLT9_MAGGR Putative uncharacterized protein OS=Magna... 72 3e-11 tr|B6M8C2|B6M8C2_BRAFL Putative uncharacterized protein OS=Branc... 72 4e-11 tr|A7RGM3|A7RGM3_NEMVE Predicted protein OS=Nematostella vectens... 72 4e-11 tr|Q7ZYB9|Q7ZYB9_XENLA LOC398447 protein (Fragment) OS=Xenopus l... 71 5e-11
>tr|A9SWT0|A9SWT0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234339 PE=4 SV=1 Length = 732
Score = 145 bits (365), Expect = 3e-33 Identities = 85/211 (40%), Positives = 129/211 (61%), Gaps = 5/211 (2%) Frame = +2
Query: 8 KPSKRKKRPATEESQNVISDGLKQHGTEIMHLDGESQDAIDDGEETMEEKLKALGI---- 175 K KR+ EE+Q + ++ + LD + D E T+EE++ AL + Sbjct: 444 KAKKRRAEAEDEEAQPNLKSPEEKTDMKT-DLDDVALTVPADEEPTLEERMIALKVIEEV 502
Query: 176 -MPDXXXXXXXKQGSVAPLKADSLQVLMTQALESYDKALLKQCLSVTDNKIIVKTVQMLN 352 + D +V P +ADSLQVL++QAL++ D +LL+QCL++ D K+I T++ L Sbjct: 503 DLKDLKGDTHDLDRTVVP-RADSLQVLLSQALQADDNSLLEQCLNIHDEKVISNTIRRLR 561
Query: 353 PSVAAKFLQMSVDNLDLRTGRALVLVPWIKAVLLYHASYIMXXXXXXXXXXXXYQVIDSR 532 P AAKFL ++V ++ R RAL LVPW++AVLL HAS++M YQ+I++R Sbjct: 562 PFEAAKFLTVAVSKMEGRPQRALGLVPWVRAVLLQHASFVMTNLALQPVLTSLYQIIEAR 621
Query: 533 LTVFRPLLSLSGRLDLIMAQVARAETTQQQE 625 L+VFRPLLSLSGRLDL+MAQ+ + E+ +++ Sbjct: 622 LSVFRPLLSLSGRLDLVMAQIQKNESQSKED 652
>tr|A8IVB9|A8IVB9_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_147090 PE=4 SV=1 Length = 546
Score = 103 bits (256), Expect = 1e-20 Identities = 54/119 (45%), Positives = 76/119 (63%) Frame = +2
Query: 230 KADSLQVLMTQALESYDKALLKQCLSVTDNKIIVKTVQMLNPSVAAKFLQMSVDNLDLRT 409 KADSL VL+TQA+ S D+ALL++CL+ + +I TV + P AA FL+ +VD L + Sbjct: 339 KADSLSVLLTQAIRSNDRALLERCLATSSTTVIANTVARIVPMDAALFLKAAVDRLVSKP 398
Query: 410 GRALVLVPWIKAVLLYHASYIMXXXXXXXXXXXXYQVIDSRLTVFRPLLSLSGRLDLIM 586 RA+ LVPWI+AVL +H +Y+M +Q IDSR+ + PLL L GRL L++ Sbjct: 399 NRAVQLVPWIRAVLHHHTAYLMSAPGVQPALTSLFQAIDSRVRLHDPLLRLYGRLGLVL 457
>tr|A7P7R4|A7P7R4_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034563001 PE=4 SV=1 Length = 357
Score = 98.6 bits (244), Expect = 3e-19 Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 9/200 (4%) Frame = +2
Query: 23 KKRPATEE----SQNVISDGLKQHGTEIMHLDGESQDAIDDGEE-TMEEKLKALGIMP-- 181 KKR A++ ++N++ G HG + DG D DD +E TM EKL++L ++ Sbjct: 107 KKRAASDPDLAAAENMVDIG---HGEAV---DGVQID--DDWDEPTMGEKLESLNLIDNA 158
Query: 182 DXXXXXXXKQGSV--APLKADSLQVLMTQALESYDKALLKQCLSVTDNKIIVKTVQMLNP 355 D ++ S+ P ADS+ VL+ QAL + D+ALL CL D K+I +V +LNP Sbjct: 159 DNGKTRENQESSLHTMPPSADSVHVLLKQALNADDRALLLDCLYTQDEKVIANSVSLLNP 218
Query: 356 SVAAKFLQMSVDNLDLRTGRALVLVPWIKAVLLYHASYIMXXXXXXXXXXXXYQVIDSRL 535 S K L + ++ R + +PW++++LL HAS IM +Q+I+SR+ Sbjct: 219 SHVLKLLGSLISMIESRGAILVCALPWLRSLLLQHASGIMSQESSLLALNSLFQLIESRV 278
Query: 536 TVFRPLLSLSGRLDLIMAQV 595 + FRP L L LD + A V Sbjct: 279 STFRPALQLQSCLDFLYAGV 298
>tr|Q5VQD9|Q5VQD9_ORYSJ Putative uncharacterized protein OJ1316_H05.26 (Putative uncharacterized protein) (Os01g0649000 protein) OS=Oryza sativa subsp. japonica GN=OJ1316_H05.26 PE=4 SV=1 Length = 607
Score = 96.3 bits (238), Expect = 1e-18 Identities = 57/164 (34%), Positives = 90/164 (54%) Frame = +2
Query: 137 EETMEEKLKALGIMPDXXXXXXXKQGSVAPLKADSLQVLMTQALESYDKALLKQCLSVTD 316 E TMEEKL +L ++ + + S+AP ADS+ VL+ QAL + D L +CL D Sbjct: 398 EPTMEEKLASLNLL-NKSEITEEQPPSLAPPSADSVHVLLKQALRADDHTELLKCLYNRD 456
Query: 317 NKIIVKTVQMLNPSVAAKFLQMSVDNLDLRTGRALVLVPWIKAVLLYHASYIMXXXXXXX 496 K+IVK+V +L P+ K L+ V + R + + ++PW++A+L H S I+ Sbjct: 457 EKVIVKSVSLLTPADVVKLLKFFVLLIQSRGAKLVCMLPWLQALLCRHMSSIVSQESSLL 516
Query: 497 XXXXXYQVIDSRLTVFRPLLSLSGRLDLIMAQVARAETTQQQEV 628 YQ+ID+R + F+ L LS LD + + V+ ET ++ V Sbjct: 517 LLNSLYQLIDARTSTFKSALQLSTTLDYLFSGVSDGETDEEDAV 560
>tr|A2WT83|A2WT83_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03069 PE=4 SV=1 Length = 607
Score = 96.3 bits (238), Expect = 1e-18 Identities = 57/164 (34%), Positives = 90/164 (54%) Frame = +2
Query: 137 EETMEEKLKALGIMPDXXXXXXXKQGSVAPLKADSLQVLMTQALESYDKALLKQCLSVTD 316 E TMEEKL +L ++ + + S+AP ADS+ VL+ QAL + D L +CL D Sbjct: 398 EPTMEEKLASLNLL-NKSEITEEQPPSLAPPSADSVHVLLKQALRADDHTELLKCLYNRD 456
Query: 317 NKIIVKTVQMLNPSVAAKFLQMSVDNLDLRTGRALVLVPWIKAVLLYHASYIMXXXXXXX 496 K+IVK+V +L P+ K L+ V + R + + ++PW++A+L H S I+ Sbjct: 457 EKVIVKSVSLLTPADVVKLLKFFVLLIQSRGAKLVCMLPWLQALLCRHMSSIVSQESSLL 516
Query: 497 XXXXXYQVIDSRLTVFRPLLSLSGRLDLIMAQVARAETTQQQEV 628 YQ+ID+R + F+ L LS LD + + V+ ET ++ V Sbjct: 517 LLNSLYQLIDARTSTFKSALQLSTTLDYLFSGVSDGETDEEDAV 560
>tr|B6SUH5|B6SUH5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 266
Score = 92.0 bits (227), Expect = 3e-17 Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 4/208 (1%) Frame = +2
Query: 8 KPSKRKKRPATEESQN--VISDGLKQHGTEIMHLDGESQDAIDDGEETMEEKLKALGIMP 181 K RK+ + +S N VIS+ + ++ + E TMEEKL L ++ Sbjct: 24 KERSRKRTSSVLDSTNDTVISEEMSEYNLD---------------EPTMEEKLATLNLIN 68
Query: 182 -DXXXXXXXKQG-SVAPLKADSLQVLMTQALESYDKALLKQCLSVTDNKIIVKTVQMLNP 355 + KQ SVAP ADS+ +L+ QAL + D L CL D K+I K++ +L P Sbjct: 69 RENEIHGTEKQSLSVAPPSADSVHILLKQALRADDNVALLTCLYNRDEKVITKSISLLTP 128
Query: 356 SVAAKFLQMSVDNLDLRTGRALVLVPWIKAVLLYHASYIMXXXXXXXXXXXXYQVIDSRL 535 + K L+ V + R + L+PW++ +L H S I+ YQ+ID+R Sbjct: 129 ADVVKLLKFFVLQIQSRGAVLVCLLPWLQTLLNRHMSSIVSQESSLSLLNSLYQLIDART 188
Query: 536 TVFRPLLSLSGRLDLIMAQVARAETTQQ 619 + F+ L LS LD + +++A E ++ Sbjct: 189 STFKSALQLSTTLDYLFSEIAEDEADEE 216
>tr|A9V9R4|A9V9R4_MONBE Predicted protein OS=Monosiga brevicollis GN=38725 PE=4 SV=1 Length = 637
Score = 83.2 bits (204), Expect = 1e-14 Identities = 43/132 (32%), Positives = 72/132 (54%) Frame = +2
Query: 230 KADSLQVLMTQALESYDKALLKQCLSVTDNKIIVKTVQMLNPSVAAKFLQMSVDNLDLRT 409 ++ +L ++ QAL S D+ALL++CL+V KI+ +V L F ++ + L + Sbjct: 403 RSGTLSQMLAQALHSDDQALLEECLAVNKEKIVSASVGRLPQEHVLSFFKIVLAKLQAKP 462
Query: 410 GRALVLVPWIKAVLLYHASYIMXXXXXXXXXXXXYQVIDSRLTVFRPLLSLSGRLDLIMA 589 R L+ WI+AVL+ H +Y+ Y +I++R PLL L GRLDL++ Sbjct: 463 SRGTALLIWIRAVLVTHFAYLASQPDLSSVLGPLYSLIEARAASMNPLLKLQGRLDLMLE 522
Query: 590 QVARAETTQQQE 625 Q RA+ +++E Sbjct: 523 QTRRAQAREEEE 534
>tr|A7F9P8|A7F9P8_SCLS1 Putative uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_14329 PE=4 SV=1 Length = 399
Score = 82.4 bits (202), Expect = 2e-14 Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%) Frame = +2
Query: 5 IKPSKRKKRPATEESQNVISDG--LKQHG---TEIMHLDGESQDAIDDGEETMEEKLKAL 169 ++ S ++ + +E + + DG +++G T++ D ++ A +DGE T + ++A Sbjct: 54 VEISSDEENESDDEMEEIEEDGSDAEENGNVTTDVAMEDEGAEAAEEDGEPTFGDLIRAH 113
Query: 170 GIMP---------DXXXXXXXKQGSVAPLKADSLQVLMTQALESYDKALLKQCLSVTDNK 322 P Q S+ SL ++TQAL++ D ALL+ CL TD Sbjct: 114 ASEPIDVAAAFGDSKAQALSYPQNSIQAPSGASLGTVLTQALKTNDVALLESCLHTTDLS 173
Query: 323 IIVKTVQMLNPSVAAKFLQMSVDNLDLRTGRALVLVPWIKAVLLYHASYIMXXXXXXXXX 502 I T+Q L+ +AA LQ + L R GRA L+ W++ ++ H Y+ Sbjct: 174 TIRATIQRLDSPLAAILLQKLAERLHRRPGRAGSLMVWVQWSMITHGGYLATQRGLIKKL 233
Query: 503 XXXYQVIDSRLTVFRPLLSLSGRLDLIMAQV 595 +V+D R + LLSL G+LD++ AQ+ Sbjct: 234 AEVNRVLDERSKSLQHLLSLKGKLDMLDAQI 264
>tr|Q2QLN8|Q2QLN8_ORYSJ Os12g0634800 protein OS=Oryza sativa subsp. japonica GN=Os12g0634800 PE=2 SV=1 Length = 252
Score = 81.3 bits (199), Expect = 5e-14 Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 15/174 (8%) Frame = +2
Query: 119 DAIDDG---------EETMEEKLKALGIMPDXXXXXXXKQGSVAPL------KADSLQVL 253 DAI+D E TMEEKL L ++ + PL ADS+ VL Sbjct: 21 DAINDSGANPEYNLDEPTMEEKLATLNLLNGGGDGTAGEATQEQPLPVVMPPSADSVHVL 80
Query: 254 MTQALESYDKALLKQCLSVTDNKIIVKTVQMLNPSVAAKFLQMSVDNLDLRTGRALVLVP 433 + QAL + D A L CL D+K+IV ++ +L P+ A K L+ + + R + L+P Sbjct: 81 LKQALRADDHASLLNCLYNKDHKVIVNSISLLTPADAVKLLKFFILLMQSRGAVLVSLLP 140
Query: 434 WIKAVLLYHASYIMXXXXXXXXXXXXYQVIDSRLTVFRPLLSLSGRLDLIMAQV 595 W++++L H S I+ Y +ID+R + F+ L LS LD + +++ Sbjct: 141 WLQSLLSQHMSSIVSQESSLLLLNSLYHLIDARTSTFKSSLQLSTCLDYLFSEI 194
>tr|A3CJR8|A3CJR8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_035540 PE=4 SV=1 Length = 236
Score = 81.3 bits (199), Expect = 5e-14 Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 15/174 (8%) Frame = +2
Query: 119 DAIDDG---------EETMEEKLKALGIMPDXXXXXXXKQGSVAPL------KADSLQVL 253 DAI+D E TMEEKL L ++ + PL ADS+ VL Sbjct: 5 DAINDSGANPEYNLDEPTMEEKLATLNLLNGGGDGTAGEATQEQPLPVVMPPSADSVHVL 64
Query: 254 MTQALESYDKALLKQCLSVTDNKIIVKTVQMLNPSVAAKFLQMSVDNLDLRTGRALVLVP 433 + QAL + D A L CL D+K+IV ++ +L P+ A K L+ + + R + L+P Sbjct: 65 LKQALRADDHASLLNCLYNKDHKVIVNSISLLTPADAVKLLKFFILLMQSRGAVLVSLLP 124
Query: 434 WIKAVLLYHASYIMXXXXXXXXXXXXYQVIDSRLTVFRPLLSLSGRLDLIMAQV 595 W++++L H S I+ Y +ID+R + F+ L LS LD + +++ Sbjct: 125 WLQSLLSQHMSSIVSQESSLLLLNSLYHLIDARTSTFKSSLQLSTCLDYLFSEI 178
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