DK962893 |
Clone id |
TST39A01NGRL0015_B07 |
Library |
TST39 |
Length |
614 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0015_B07. 5' end sequence. |
Accession |
DK962893 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1599Contig1 |
Sequence |
CATGCTGTGATGGAGATGGATGATGCTGCATGTTATGTGTGTGCAAGAAGCTAACGCTAT TGCATGACTGTTGGCCGCAAGGACCCTGCTGTGACCATCTGCCCTGACCTGTAGCAATGG CAGAAGATGGATAAATGAACGCCTGCTGTCCTTTAAATATTCCTCCATATGGCAAACTGT ACGACAGCTGAATTTTGGATAATTCATTTAATTGGCGTTTTTCTGACTGCTGGCTGGCCA AAAATAGCATTAAACATGCTCTTAATGCTGAATTAGTTGCTGCTGCAGAATGTTATGTCC ACGTGACCGATGTCACTTGGCACGTGACATCCCCCTCGAATAATCTTGAAGAAGGGGTTC TGCATCTAACTCCATGCTGAATTCTTTCTTCAACTTCCTGAATGATCTTCTCTGACATGA TGTGAGTCCTTGAATGCTGGAGAATGTGGATTCCCTCTGCCGCTGCTGAGCCTCCCCTTG TGGCATCCTGGATATGTCCTGTGACGCTCCCGTCCTGTGACACTCCTCCACGGTCAGCTA TTGAATTGGCTTCCTGGATACCCTTGCCTCGATCACGATCACGATCTCCAATGAATGTGG ACTGCTCCTGCTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P33075 |
Definition |
sp|P33075|KAD1_SCHPO Adenylate kinase 1 OS=Schizosaccharomyces pombe |
Align length |
57 |
Score (bit) |
33.1 |
E-value |
1.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962893|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0015_B07, 5' (614 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P33075|KAD1_SCHPO Adenylate kinase 1 OS=Schizosaccharomyces p... 33 1.2 sp|P79750|CSF11_FUGRU Macrophage colony-stimulating factor 1 rec... 32 3.4 sp|Q8VE18|CQ071_MOUSE UPF0487 protein C17orf71 homolog OS=Mus mu... 31 4.4 sp|P10388|GLT5_WHEAT Glutenin, high molecular weight subunit DX5... 31 5.8 sp|P08489|GLT4_WHEAT Glutenin, high molecular weight subunit PW2... 31 5.8 sp|Q9LN63|BZR2_ARATH Protein BRASSINAZOLE-RESISTANT 2 OS=Arabido... 30 7.5 sp|Q810W7|MAST1_RAT Microtubule-associated serine/threonine-prot... 30 9.8 sp|Q9R1L5|MAST1_MOUSE Microtubule-associated serine/threonine-pr... 30 9.8 sp|Q9Y2H9|MAST1_HUMAN Microtubule-associated serine/threonine-pr... 30 9.8
>sp|P33075|KAD1_SCHPO Adenylate kinase 1 OS=Schizosaccharomyces pombe GN=adk1 PE=2 SV=1 Length = 220
Score = 33.1 bits (74), Expect = 1.2 Identities = 18/57 (31%), Positives = 28/57 (49%) Frame = -2
Query: 556 QEANSIADRGGVSQDGSVTGHIQDATRGGSAAAEGIHILQHSRTHIMSEKIIQEVEE 386 +EA I D+GG+ D VTG I+D G + RT + +EK+ ++E Sbjct: 50 KEAKKIMDQGGLVSDDIVTGMIKDEILNNPECKNGFILDGFPRTVVQAEKLTALLDE 106
>sp|P79750|CSF11_FUGRU Macrophage colony-stimulating factor 1 receptor 1 OS=Fugu rubripes GN=csf1r1 PE=3 SV=1 Length = 975
Score = 31.6 bits (70), Expect = 3.4 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +3
Query: 270 ELVAAAECYVHVTDVTWHV-TSPSNNLEEGVLH 365 EL E Y +TD WH TSPS +++E + H Sbjct: 341 ELGVMVEAYPQITDHRWHTPTSPSTSMQEHIYH 373
>sp|Q8VE18|CQ071_MOUSE UPF0487 protein C17orf71 homolog OS=Mus musculus PE=2 SV=1 Length = 991
Score = 31.2 bits (69), Expect = 4.4 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -2
Query: 574 DRGKGIQ-EANSIADRGGVSQDGSVTGHIQDATRGGSAAAEG 452 D G GI+ +A S+ + GG G+ G D+ RGG A AEG Sbjct: 87 DPGTGIKTKAVSVGEAGGAGDPGAAAG---DSLRGGMATAEG 125
>sp|P10388|GLT5_WHEAT Glutenin, high molecular weight subunit DX5 OS=Triticum aestivum GN=GLU-1D-1D PE=3 SV=4 Length = 839
Score = 30.8 bits (68), Expect = 5.8 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = -2
Query: 154 KGQQAFIYPSSAIATGQGRWSQQGPCGQQSCNSVSFLH 41 +GQQ + YP+S TGQG+ S QG G S VS H Sbjct: 770 QGQQGY-YPTSLQQTGQGQQSGQGQQGYYSSYHVSVEH 806
>sp|P08489|GLT4_WHEAT Glutenin, high molecular weight subunit PW212 OS=Triticum aestivum PE=3 SV=1 Length = 838
Score = 30.8 bits (68), Expect = 5.8 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = -2
Query: 154 KGQQAFIYPSSAIATGQGRWSQQGPCGQQSCNSVSFLH 41 +GQQ + YP+S TGQG+ S QG G S VS H Sbjct: 769 QGQQGY-YPTSLQQTGQGQQSGQGQQGYYSSYHVSVEH 805
>sp|Q9LN63|BZR2_ARATH Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1 Length = 335
Score = 30.4 bits (67), Expect = 7.5 Identities = 13/47 (27%), Positives = 20/47 (42%) Frame = +3
Query: 456 SAAAEPPLVASWICPVTLPSCDTPPRSAIELASWIPLPRSRSRSPMN 596 SA A P + P T+P CD S ++ WI + + P + Sbjct: 219 SAPASPTHHRQFHAPATIPECDESDSSTVDSGHWISFQKFAQQQPFS 265
>sp|Q810W7|MAST1_RAT Microtubule-associated serine/threonine-protein kinase 1 OS=Rattus norvegicus GN=Mast1 PE=2 SV=1 Length = 1570
Score = 30.0 bits (66), Expect = 9.8 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = -1
Query: 572 SRQGYPGSQFNS*PWRSVTGRERHR---TYPGCHKGRLSSGRGNPHSPAFKDSHHVR 411 S PGS + P RS T R Y G S P+SPA SHH+R Sbjct: 1122 SSDSLPGSPTHGLPARSPTHSYRSTPDSAYLGASSQSSSPASSTPNSPASSASHHIR 1178
>sp|Q9R1L5|MAST1_MOUSE Microtubule-associated serine/threonine-protein kinase 1 OS=Mus musculus GN=Mast1 PE=1 SV=3 Length = 1570
Score = 30.0 bits (66), Expect = 9.8 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = -1
Query: 572 SRQGYPGSQFNS*PWRSVTGRERHR---TYPGCHKGRLSSGRGNPHSPAFKDSHHVR 411 S PGS + P RS T R Y G S P+SPA SHH+R Sbjct: 1122 SSDSLPGSPTHGLPARSPTHSYRSTPDSAYLGASSQSSSPASSTPNSPASSASHHIR 1178
>sp|Q9Y2H9|MAST1_HUMAN Microtubule-associated serine/threonine-protein kinase 1 OS=Homo sapiens GN=MAST1 PE=1 SV=2 Length = 1570
Score = 30.0 bits (66), Expect = 9.8 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%) Frame = -1
Query: 572 SRQGYPGSQFNS*PWRSVTGRERHR---TYPGCHKGRLSSGRGNPHSPAFKDSHHVR 411 S PGS + P RS T R Y G S P+SPA SHH+R Sbjct: 1120 SSDSLPGSPTHGLPARSPTHSYRSTPDSAYLGASSQSSSPASSTPNSPASSASHHIR 1176
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3T1G4 |
Definition |
tr|B3T1G4|B3T1G4_9ZZZZ Putative NHL repeat protein OS=uncultured marine microorganism HF4000_009L19 |
Align length |
60 |
Score (bit) |
37.0 |
E-value |
0.91 |
Report |
|