| Report |
 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962753|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_L11, 5'
(646 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A8J5T5|A8J5T5_CHLRE COP-II coat subunit OS=Chlamydomonas rein... 39 0.27
tr|A6SWV7|A6SWV7_JANMA Multidrug efflux system transmembrane pro... 37 1.3
tr|Q39TW1|Q39TW1_GEOMG 4Fe-4S ferredoxin, iron-sulfur binding pr... 35 3.0
tr|A1R9P9|A1R9P9_ARTAT Nitrite reductase [NAD(P)H], large subuni... 35 3.0
tr|B1J457|B1J457_PSEPW FAD-dependent pyridine nucleotide-disulph... 35 5.1
tr|Q4Q0B5|Q4Q0B5_LEIMA Protein transport protein sec23-like prot... 35 5.1
tr|Q7UZE0|Q7UZE0_RHOBA Similar to L-sorbosone dehydrogenase OS=R... 34 6.7
tr|Q1I2R6|Q1I2R6_PSEE4 Rubredoxin-NAD(+) reductase OS=Pseudomona... 34 6.7
tr|B5E7S9|B5E7S9_GEOBB 4Fe-4S ferredoxin iron-sulfur binding dom... 34 6.7
tr|B2UEN1|B2UEN1_RALPJ Putative signal peptide protein OS=Ralsto... 34 6.7
tr|Q0YNI7|Q0YNI7_9DELT 4Fe-4S ferredoxin, iron-sulfur binding OS... 34 6.7
tr|A8L868|A8L868_FRASN ATP-dependent endonuclease of the OLD fam... 34 8.7
tr|B3JSZ6|B3JSZ6_9DELT 4Fe-4S ferredoxin iron-sulfur binding dom... 34 8.7
tr|A3UL25|A3UL25_VIBSP Cysteine synthase OS=Vibrio splendidus 12... 34 8.7
tr|A8IM86|A8IM86_OECSM Silk fibroin OS=Oecophylla smaragdina GN=... 34 8.7
tr|Q5BBN8|Q5BBN8_EMENI Putative uncharacterized protein OS=Emeri... 34 8.7
>tr|A8J5T5|A8J5T5_CHLRE COP-II coat subunit OS=Chlamydomonas
reinhardtii GN=SEC31 PE=4 SV=1
Length = 1313
Score = 38.9 bits (89), Expect = 0.27
Identities = 35/104 (33%), Positives = 43/104 (41%), Gaps = 16/104 (15%)
Frame = +1
Query: 67 SAQQDNTNVCASARAAGKDGTLVKERDYISL---------GLTGAAPEQMLTSSIPSGVD 219
SA T A AAG D ++ D + G A+P Q+L P D
Sbjct: 508 SAAGGPTENGVDAAAAGMDQLNLQNADGVPRLEVPGASVGGAVAASPHQLLAQDDPDFFD 567
Query: 220 KMECDNVVLSLGLGPPADKAAAAS-------QEQNTGIVDQQIR 330
K+E VVL GL P AD AAAA+ Q N G +D R
Sbjct: 568 KLEDTEVVLG-GLAPDADVAAAAAGPDLGGVQPLNAGAMDAMAR 610
>tr|A6SWV7|A6SWV7_JANMA Multidrug efflux system transmembrane
protein OS=Janthinobacterium sp. (strain Marseille)
(Minibacterium massiliensis) GN=mma_1064 PE=4 SV=1
Length = 570
Score = 36.6 bits (83), Expect = 1.3
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +1
Query: 61 SGSAQQDNTNV--CASARAAGKDGTLVKERDYISLGLTGAAPEQMLTSSIPSGVDKMECD 234
SG A+Q T + + GKDG + E+ + LG+T Q+L SG++ E D
Sbjct: 483 SGFAEQSTTRTPRTGTVKVIGKDGNI--EQRKVELGVTNRVQMQVL-----SGLE--EGD 533
Query: 235 NVVLSLGLGPPADKAAAASQEQ 300
VVL + L P + AAA+ +Q
Sbjct: 534 TVVLGMKLPPSTKRPAAATNQQ 555
>tr|Q39TW1|Q39TW1_GEOMG 4Fe-4S ferredoxin, iron-sulfur binding
protein OS=Geobacter metallireducens (strain GS-15 /
ATCC 53774 / DSM 7210) GN=Gmet_2084 PE=4 SV=1
Length = 1014
Score = 35.4 bits (80), Expect = 3.0
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 142 RDYISLGLTGAAPEQMLT--SSIPSGVDKMECDNVVLSLGLGPPADKAAAASQ 294
R Y+++G + + + S++ GV + E D VVLS+GL PP D A AS+
Sbjct: 325 RSYVTIGREIESTKNVTIRYSTVDDGVKEEEFDMVVLSVGLNPPKDVEALASK 377
>tr|A1R9P9|A1R9P9_ARTAT Nitrite reductase [NAD(P)H], large subunit
OS=Arthrobacter aurescens (strain TC1) GN=AAur_3265 PE=4
SV=1
Length = 826
Score = 35.4 bits (80), Expect = 3.0
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Frame = +1
Query: 34 AGGIPVCVLSGSAQQDNTNVCASARAAGKDGTLVKERDYISLGL---TGAAPEQMLTSSI 204
A G+ V V+ N + G DG + R +LG+ TG+ +L S
Sbjct: 178 ANGLDVAVVHSGGHLMNAQL-------GPDGGAILRRSVEALGIEVHTGSRTTAILGSDQ 230
Query: 205 PSGV-----DKMECDNVVLSLGLGPPADKAAAASQEQNTGI-VDQQIRL 333
SGV +++C+ VV++ G+ P D A + GI VD Q+R+
Sbjct: 231 LSGVRLRDDTEIDCNMVVVTAGIRPNVDVAVVSGLAVERGIVVDDQLRV 279
>tr|B1J457|B1J457_PSEPW FAD-dependent pyridine nucleotide-disulphide
oxidoreductase OS=Pseudomonas putida (strain W619)
GN=PputW619_0159 PE=4 SV=1
Length = 382
Score = 34.7 bits (78), Expect = 5.1
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 229 CDNVVLSLGLGPPADKAAAASQEQNTG-IVDQQIR 330
CD VV ++GL P D AAAA + N G +VD+Q+R
Sbjct: 230 CDLVVSAIGLRPRTDLAAAAGLQTNRGVVVDRQLR 264
>tr|Q4Q0B5|Q4Q0B5_LEIMA Protein transport protein sec23-like protein
OS=Leishmania major GN=LmjF36.6430 PE=4 SV=1
Length = 850
Score = 34.7 bits (78), Expect = 5.1
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +1
Query: 391 SLSNDQYHQHMVNWQPQAEALSQGAPSFGKGHTSSVPVWSTPVTGRFTVPVPKVSTIPAK 570
S S D YHQH +PQA+ APSFG+ T +V T R++ + ++ I
Sbjct: 84 SASQDAYHQHQYQQRPQAQ-----APSFGQPATGTVEERPAEATTRWSWSLYSMNRIDGA 138
Query: 571 R 573
R
Sbjct: 139 R 139
>tr|Q7UZE0|Q7UZE0_RHOBA Similar to L-sorbosone dehydrogenase
OS=Rhodopirellula baltica GN=RB24 PE=4 SV=1
Length = 934
Score = 34.3 bits (77), Expect = 6.7
Identities = 23/96 (23%), Positives = 44/96 (45%)
Frame = +1
Query: 190 LTSSIPSGVDKMECDNVVLSLGLGPPADKAAAASQEQNTGIVDQQIRLKVAMTSAKPQHF 369
+ P+G+D ++ + ++++ LG P A+ + QN+ + QI +A+ +AK
Sbjct: 636 IKGQFPTGLDSLDRELAIMAIYLGDPESTASVVAALQNSPSQESQIHYAMALRAAKE--- 692
Query: 370 WHESFRVSLSNDQYHQHMVNWQPQAEALSQGAPSFG 477
SND ++ + A A +G SFG
Sbjct: 693 -------GWSNDLRRDYLAWFNEMATA--RGGMSFG 719
>tr|Q1I2R6|Q1I2R6_PSEE4 Rubredoxin-NAD(+) reductase OS=Pseudomonas
entomophila (strain L48) GN=rubB PE=4 SV=1
Length = 382
Score = 34.3 bits (77), Expect = 6.7
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +1
Query: 229 CDNVVLSLGLGPPADKAAAASQEQNTG-IVDQQIR 330
CD VV ++GL P D AAAA + N G +VD+Q+R
Sbjct: 230 CDLVVSAIGLRPRTDLAAAAGLQVNRGVVVDRQLR 264
>tr|B5E7S9|B5E7S9_GEOBB 4Fe-4S ferredoxin iron-sulfur binding domain
protein OS=Geobacter bemidjiensis (strain Bem / ATCC
BAA-1014 / DSM 16622) GN=Gbem_1447 PE=4 SV=1
Length = 1012
Score = 34.3 bits (77), Expect = 6.7
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +1
Query: 142 RDYISLG--LTGAAPEQMLTSSIPSGVDKMECDNVVLSLGLGPPADKAAAASQ 294
R Y+++G + + + S++ GV + E D VVLS+GL PP D A A++
Sbjct: 325 RSYVTVGREIESSKNVTIRYSTVDQGVKEEEFDMVVLSVGLNPPKDVEALATK 377
>tr|B2UEN1|B2UEN1_RALPJ Putative signal peptide protein OS=Ralstonia
pickettii (strain 12J) GN=Rpic_3309 PE=3 SV=1
Length = 573
Score = 34.3 bits (77), Expect = 6.7
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Frame = +1
Query: 262 PPADKAAAASQEQNTGIVDQQIRLKVAMTSAKPQHFWHESFRVSLSNDQYHQHMVNWQPQ 441
PP A A++ +T ++ Q SA+ Q W + + + + W PQ
Sbjct: 399 PPMAAARNAAEFTDTLVLAGQSVQYHGTISARGQMSWTAARAAAQRGQGFDAILAQWWPQ 458
Query: 442 AEALSQGAPSFG---------KGHTSSVPVWSTPV---TGRFTVPVPKVSTIPAKRPYQD 585
A S +P G + + P WS + G T P+P V + RPY D
Sbjct: 459 ATLTSFQSPVAGDCSPVAGAQQWLQARAPGWSARLRAEAGYETPPLPAVCVVHEGRPYAD 518
Query: 586 ANGER 600
A R
Sbjct: 519 ARRNR 523
|