DK962734 |
Clone id |
TST39A01NGRL0014_K16 |
Library |
TST39 |
Length |
630 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_K16. 5' end sequence. |
Accession |
DK962734 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
ATGACTACCATTCTGATCCAATAATACCTCCAAAGAATCAGAGTCACCATCCACAAACCT ATCATCCTCACTTAGAAACTTTCTGTTTAGAACAGGAGTTTAATTGCATTAAATTATGGA ACCACATTTGGTATTGCAAATTCATTCAGGTCATGCTGTTACTCCAACCGTTTCAAGAAC TGGCAATGCTCACTTTCAACTGTTTGCCGAATAAGGGAATTCAATGGCGCATACTGGATG ATCTTACCTAAGCACACCTAAAGATTATTGTCAGCTTTTGACAGGTAAAACTGGTTTGGT ACTACAATAATGCATTGGGAAGACCAAACAAAAAGAAGATAATTGCCCGGCAAAAGGCGT ATCATGGATCAACAATAGTTGCAGCAAGTCTCACAGGACTAAGCAACCTTCATCAAAGCT TTGATCTACCTGTCCCCTTTGTCCTGCACACAGACTGTCCTCACTACTGGCGCTTTCGCA ATGCAGGTGAAAGCGAGGAAGATTTTGCCACAAGATTGGCTAATAATTTGGAACAACTAA TCCTTAAGGAGGGTGCTGACAATATTGCAGCATTTATTGCAGAACCAGTTATGGGGGCTG GTGGAGTGATTCCTCCTCCTGCCACGTATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q53196 |
Definition |
sp|Q53196|Y4UB_RHISN Uncharacterized aminotransferase y4uB OS=Rhizobium sp. (strain NGR234) |
Align length |
116 |
Score (bit) |
137.0 |
E-value |
3.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962734|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_K16, 5' (630 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q53196|Y4UB_RHISN Uncharacterized aminotransferase y4uB OS=Rh... 137 3e-32 sp|O94562|YGD3_SCHPO Uncharacterized aminotransferase C1771.03c ... 69 2e-11 sp|O34662|YODT_BACSU Uncharacterized aminotransferase yodT OS=Ba... 65 3e-10 sp|P28269|OAPT_PSEPU Omega-amino acid--pyruvate aminotransferase... 61 4e-09 sp|P33189|YHXA_BACSU Uncharacterized aminotransferase yhxA OS=Ba... 56 2e-07 sp|Q9APM5|TPA_BILWA Taurine--pyruvate aminotransferase OS=Biloph... 53 1e-06 sp|P53555|BIOA_BACSU Adenosylmethionine-8-amino-7-oxononanoate a... 52 3e-06 sp|Q58696|BIOA_METJA Adenosylmethionine-8-amino-7-oxononanoate a... 45 4e-04 sp|O66557|BIOA_AQUAE Adenosylmethionine-8-amino-7-oxononanoate a... 45 4e-04 sp|Q92BC0|ARGD_LISIN Acetylornithine aminotransferase OS=Listeri... 44 7e-04 sp|P16932|DGDA_BURCE 2,2-dialkylglycine decarboxylase OS=Burkhol... 44 9e-04 sp|Q10174|YAV5_SCHPO Uncharacterized aminotransferase C27F1.05c ... 43 0.001 sp|P44426|BIOA_HAEIN Adenosylmethionine-8-amino-7-oxononanoate a... 42 0.002 sp|Q7V0G0|ARGD_PROMP Acetylornithine aminotransferase OS=Prochlo... 42 0.002 sp|Q3YXH0|PAT_SHISS Putrescine aminotransferase OS=Shigella sonn... 42 0.003 sp|Q0TD34|PAT_ECOL5 Putrescine aminotransferase OS=Escherichia c... 42 0.003 sp|P40829|GABT_MYCLE 4-aminobutyrate aminotransferase OS=Mycobac... 42 0.003 sp|Q31WW1|PAT_SHIBS Putrescine aminotransferase OS=Shigella boyd... 42 0.003 sp|Q1R6Q7|PAT_ECOUT Putrescine aminotransferase OS=Escherichia c... 42 0.003 sp|P42588|PAT_ECOLI Putrescine aminotransferase OS=Escherichia c... 42 0.003 sp|Q8XAN1|PAT_ECO57 Putrescine aminotransferase OS=Escherichia c... 42 0.003 sp|O14433|ARGD_KLULA Acetylornithine aminotransferase, mitochond... 42 0.003 sp|Q97GH9|ARGD_CLOAB Acetylornithine aminotransferase OS=Clostri... 42 0.003 sp|Q8ZLX7|PAT_SALTY Putrescine aminotransferase OS=Salmonella ty... 41 0.004 sp|Q8Z3L9|PAT_SALTI Putrescine aminotransferase OS=Salmonella ty... 41 0.004 sp|A9N5Z8|PAT_SALPB Putrescine aminotransferase OS=Salmonella pa... 41 0.004 sp|Q5PC95|PAT_SALPA Putrescine aminotransferase OS=Salmonella pa... 41 0.004 sp|P18544|ARGD_YEAST Acetylornithine aminotransferase, mitochond... 41 0.004 sp|Q8FDF5|PAT_ECOL6 Putrescine aminotransferase OS=Escherichia c... 41 0.006 sp|P07991|OAT_YEAST Ornithine aminotransferase OS=Saccharomyces ... 40 0.008
>sp|Q53196|Y4UB_RHISN Uncharacterized aminotransferase y4uB OS=Rhizobium sp. (strain NGR234) GN=y4uB PE=3 SV=1 Length = 467
Score = 137 bits (346), Expect = 3e-32 Identities = 60/116 (51%), Positives = 82/116 (70%) Frame = +3
Query: 282 QVKLVWYYNNALGRPNKKKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVPFVLHTDCP 461 Q KLVWYYNN G+P KKKII+R++ YHG ++V+ S+TG+S H DLP+P + HT P Sbjct: 128 QAKLVWYYNNLRGKPTKKKIISRERGYHGCSVVSGSMTGMSFYHDHMDLPLPQICHTGVP 187
Query: 462 HYWRFRNAGESEEDFATRLANNLEQLILKEGADNIAAFIAEPVMGAGGVIPPPATY 629 H++ N GE+E +F+ R A L+++I G DN+ AFIAEPV+G GG+ PPP Y Sbjct: 188 HHYWGANPGETEREFSARRAAELDEMIETLGPDNVGAFIAEPVLGTGGITPPPEGY 243
>sp|O94562|YGD3_SCHPO Uncharacterized aminotransferase C1771.03c OS=Schizosaccharomyces pombe GN=SPBC1773.03c PE=2 SV=1 Length = 459
Score = 68.9 bits (167), Expect = 2e-11 Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 3/118 (2%) Frame = +3
Query: 285 VKLVWYYNNALGRPNKKKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVPFVLHTDCPH 464 +KL+ Y +G + IIAR++ YHG+T+ A S+ G+ Q ++ P Sbjct: 122 LKLILQYWQLVGEKQRCHIIARKQGYHGNTLFALSVGGMKPRKQPYEGVFSHTTSHVSPC 181
Query: 465 Y-WRFRNAGESEEDFATRLANNLEQLILKEGADNIAAFIAEPVMGA--GGVIPPPATY 629 + +R++ GE+ E++ RLA LE IL+ G + +AAF+AE V GA G P P + Sbjct: 182 FEYRYKENGETTEEYVARLAKELEDEILRVGPEKVAAFVAETVSGACTGCATPVPGYF 239
>sp|O34662|YODT_BACSU Uncharacterized aminotransferase yodT OS=Bacillus subtilis GN=yodT PE=3 SV=1 Length = 444
Score = 65.1 bits (157), Expect = 3e-10 Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 6/161 (3%) Frame = +3
Query: 165 QPFQELAMLTFNCLPNKGIQWRIL----DDLT*AHLKIIVSF*QVKLVWYYNNALGRPNK 332 +P ++LA L LP + W + +KI + + Q K + K Sbjct: 74 EPAEQLAALLAQELPGD-VNWSFFVNSGSEAIETAMKIAIQYWQEKK---------QTQK 123
Query: 333 KKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVPFVLHTDCPHYWRFRNAGESEEDFAT 512 ++R +YHG T+ A SL+G F + PH +R + E+EEDF Sbjct: 124 SIFLSRWSSYHGITLGALSLSGFYERRYRFTHLIERYPAISAPHIYRLNH--ETEEDFVQ 181
Query: 513 RLANNLEQLILKEGADNIAAFIAEPVMGAGG--VIPPPATY 629 A+ L+ +I + G+ IA F+AEP++GA G + PPP Y Sbjct: 182 TAADELDTMIKRIGSQFIAGFVAEPIIGAAGAAITPPPGYY 222
>sp|P28269|OAPT_PSEPU Omega-amino acid--pyruvate aminotransferase OS=Pseudomonas putida PE=1 SV=1 Length = 449
Score = 61.2 bits (147), Expect = 4e-09 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 2/117 (1%) Frame = +3
Query: 285 VKLVWYYNNALGRPNKKKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVPFVLHTDCPH 464 VK+V Y G+ K K+I R + YHG I SL G++ + F P+ V H PH Sbjct: 127 VKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHL--PH 184
Query: 465 YWRFRNAGES--EEDFATRLANNLEQLILKEGADNIAAFIAEPVMGAGGVIPPPATY 629 NA ++ LA+ L +LI A NIAA EP+ G+ GV+ PP Y Sbjct: 185 TLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGY 241
>sp|P33189|YHXA_BACSU Uncharacterized aminotransferase yhxA OS=Bacillus subtilis GN=yhxA PE=3 SV=3 Length = 450
Score = 55.8 bits (133), Expect = 2e-07 Identities = 33/114 (28%), Positives = 59/114 (51%) Frame = +3
Query: 288 KLVWYYNNALGRPNKKKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVPFVLHTDCPHY 467 K+ Y+ G ++ K I+R +AYHG+T+ A S TG + ++ LH P Sbjct: 128 KIARQYHLQNGDHSRYKFISRYRAYHGNTLGALSATGQAQRKYKYEPLSQGFLHAAPPDI 187
Query: 468 WRFRNAGESEEDFATRLANNLEQLILKEGADNIAAFIAEPVMGAGGVIPPPATY 629 +R + ++ E AN +++++ E ++ IA I EP++ GG++ PP Y Sbjct: 188 YRNPDDADTLES-----ANEIDRIMTWELSETIAGVIMEPIITGGGILMPPDGY 236
>sp|Q9APM5|TPA_BILWA Taurine--pyruvate aminotransferase OS=Bilophila wadsworthia GN=tpa PE=1 SV=1 Length = 456
Score = 53.1 bits (126), Expect = 1e-06 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 1/101 (0%) Frame = +3
Query: 330 KKKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVP-FVLHTDCPHYWRFRNAGESEEDF 506 K I+ R + YHG+TI S G + P F DC Y R+ D Sbjct: 136 KTGILYRARDYHGTTIGTLSACGQFERKVQYGPFAPGFYEFPDCDVY---RSKFGDCADL 192
Query: 507 ATRLANNLEQLILKEGADNIAAFIAEPVMGAGGVIPPPATY 629 ++A LE++IL G D + A I EP+ GG++ PPA Y Sbjct: 193 GVKMAKQLEEVILTVGPDELGAVIVEPMTAGGGILVPPAGY 233
>sp|P53555|BIOA_BACSU Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Bacillus subtilis GN=bioK PE=3 SV=1 Length = 448
Score = 51.6 bits (122), Expect = 3e-06 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%) Frame = +3
Query: 285 VKLVWYYNNALGRPNKKKIIARQKAYHGSTIVAASLTGLSNLH--------QSFDLPVPF 440 +K+ + Y +G+P K+K IA + YHG TI A S+ + H +S+ P+P+ Sbjct: 121 LKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPY 180
Query: 441 VLHTDCPHYWRFRNAGESEEDFATRLANNLEQLILKEGADNIAAFIAEPVMGAGGVIPPP 620 V +R+ ++ + L QL+ + + A I V GA G+I P Sbjct: 181 V----------YRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMP 230
Query: 621 ATY 629 Y Sbjct: 231 EGY 233
>sp|Q58696|BIOA_METJA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Methanocaldococcus jannaschii GN=bioA PE=3 SV=1 Length = 464
Score = 44.7 bits (104), Expect = 4e-04 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 6/121 (4%) Frame = +3
Query: 285 VKLVWYYNNALGRPNKKKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVPFVLHTDCPH 464 +K+ + Y G + K I+ ++ YHG T+ A S+ G H F + H + P+ Sbjct: 128 IKMAYQYYVLRGDKGRTKFISVKEGYHGDTVGAMSVGGSELFHGVFKPLLFKGYHANPPY 187
Query: 465 YWR-----FRNAGE-SEEDFATRLANNLEQLILKEGADNIAAFIAEPVMGAGGVIPPPAT 626 +R F++ E +E+ N + LI K + + +MG+ G+IP P Sbjct: 188 CYRCKYHNFKDTDERNEKGCEMECLNEMISLIEKHAEEVFCVILEGGIMGSAGMIPYPDG 247
Query: 627 Y 629 Y Sbjct: 248 Y 248
>sp|O66557|BIOA_AQUAE Adenosylmethionine-8-amino-7-oxononanoate aminotransferase OS=Aquifex aeolicus GN=bioA PE=3 SV=1 Length = 453
Score = 44.7 bits (104), Expect = 4e-04 Identities = 29/112 (25%), Positives = 49/112 (43%) Frame = +3
Query: 285 VKLVWYYNNALGRPNKKKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVPFVLHTDCPH 464 +K+ ++Y G K I +AYHG T+ A S+ G+ H ++ + + P+ Sbjct: 126 IKMAYHYWKNKGVKGKNVFITLSEAYHGDTVGAVSVGGIELFHGTYKDLLFKTIKLPSPY 185
Query: 465 YWRFRNAGESEEDFATRLANNLEQLILKEGADNIAAFIAEPVMGAGGVIPPP 620 + GE + L LE ILK D +A + + A G++P P Sbjct: 186 LYCKEKYGELCPECTADLLKQLED-ILKSREDIVAVIMEAGIQAAAGMLPFP 236
>sp|Q92BC0|ARGD_LISIN Acetylornithine aminotransferase OS=Listeria innocua GN=argD PE=3 SV=1 Length = 384
Score = 43.9 bits (102), Expect = 7e-04 Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 3/103 (2%) Frame = +3
Query: 330 KKKIIARQKAYHGSTIVAASLTGLSNLHQSFDLPVP---FVLHTDCPHYWRFRNAGESEE 500 K+KII +K++HG T + S TG + +HQ F VP +V + D E Sbjct: 111 KEKIITFEKSFHGRTFGSMSATGQAKIHQGFGRLVPGFTYVPYNDI-------------E 157
Query: 501 DFATRLANNLEQLILKEGADNIAAFIAEPVMGAGGVIPPPATY 629 F T L +N AA + E + G GGVIP A + Sbjct: 158 SFKTEL------------DENTAAVMLEVIQGEGGVIPGNAAW 188
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QFW7 |
Definition |
tr|A7QFW7|A7QFW7_VITVI Chromosome undetermined scaffold_89, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
116 |
Score (bit) |
206.0 |
E-value |
7.0e-52 |
Report |
|