DK962705 |
Clone id |
TST39A01NGRL0014_J09 |
Library |
TST39 |
Length |
622 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_J09. 5' end sequence. |
Accession |
DK962705 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL766Contig1 |
Sequence |
GTATGGAAGCGACGACGCGAAGCACGTTTGTGGAACGCAGTGCACACCTTCATCATCGCC AATTACATCGGCCCGCATCTTCCGCCGCGCCCCCGCCCCCGCCCTCACCCTCACCCTCAC CCTCACCCTCCTCGCTTGGAATTCGCCGCCGCTCATGTGTGGTTTCTGCTTTCAACATCC GCCTGGGTGGAAAAAGTTGTGGCAAGTGTAGAGGGAAAGGTGCAGTGGAGTGCCCAGGGT GCAAGGGCAGTGGCAGGAACAAGAAAAATGGAAACCTGTTTGAAAGATGGAAGTGTTTTG ATTGTCAGGGATTTGGCCTTGTGAGCTGTCCCAGTTGTGGTACAGGTGGTCTCACCCCTG AGCAAAGGGGAGAACGGTAGATTCAATTTGAACACGTACCGATGGTTTTGAAGGACAGAG ATTCCTCTTTACTGTCTGCATTGTACTTTTAACAACAATGATCGGTACACCTCCTAGACT TCTGTATCTATGATATCAACCCTTTGGTTTGTTCCTGTACAGCAGTTCATTGAATGCTTT CTGCTGTTGAGAATCGATTGTTTCCCGATAATGAATCCCTATGGAAAATGGGTGGTCTCT TACAAGATTTAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8KRC9 |
Definition |
sp|Q8KRC9|DNAJ_MYXXA Chaperone protein dnaJ OS=Myxococcus xanthus |
Align length |
47 |
Score (bit) |
36.6 |
E-value |
0.1 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962705|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_J09, 5' (610 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8KRC9|DNAJ_MYXXA Chaperone protein dnaJ OS=Myxococcus xanthu... 37 0.10 sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-ri... 36 0.13 sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo sa... 34 0.67 sp|P61441|DNAJ_LEPIN Chaperone protein dnaJ OS=Leptospira interr... 33 0.87 sp|P61440|DNAJ_LEPIC Chaperone protein dnaJ OS=Leptospira interr... 33 0.87 sp|Q9VNL4|GRCR1_DROME Glutaredoxin domain-containing cysteine-ri... 33 1.5 sp|Q8A8C3|DNAJ_BACTN Chaperone protein dnaJ OS=Bacteroides theta... 33 1.5 sp|Q97BG9|DNAJ_THEVO Chaperone protein dnaJ OS=Thermoplasma volc... 32 1.9 sp|Q2VYT0|DNAJ_MAGMM Chaperone protein dnaJ OS=Magnetospirillum ... 32 1.9 sp|Q8C3L1|CC032_MOUSE Uncharacterized protein C3orf32 homolog OS... 32 2.5 sp|Q04Y48|DNAJ_LEPBL Chaperone protein dnaJ OS=Leptospira borgpe... 32 3.3 sp|Q04VC7|DNAJ_LEPBJ Chaperone protein dnaJ OS=Leptospira borgpe... 32 3.3 sp|Q64VI7|DNAJ_BACFR Chaperone protein dnaJ OS=Bacteroides fragi... 32 3.3 sp|Q5LED4|DNAJ_BACFN Chaperone protein dnaJ OS=Bacteroides fragi... 32 3.3 sp|Q73T77|DNAJ2_MYCPA Chaperone protein dnaJ 2 OS=Mycobacterium ... 32 3.3 sp|P0A548|DNAJ1_MYCTU Chaperone protein dnaJ 1 OS=Mycobacterium ... 32 3.3 sp|P0A549|DNAJ1_MYCBO Chaperone protein dnaJ 1 OS=Mycobacterium ... 32 3.3 sp|Q73Q15|DNAJ_TREDE Chaperone protein dnaJ OS=Treponema dentico... 31 4.3 sp|Q11KJ5|DNAJ_MESSB Chaperone protein dnaJ OS=Mesorhizobium sp.... 31 4.3 sp|Q9HJ83|DNAJ_THEAC Chaperone protein dnaJ OS=Thermoplasma acid... 31 5.6 sp|Q8BK64|AHSA1_MOUSE Activator of 90 kDa heat shock protein ATP... 31 5.6 sp|A0LJ41|DNAJ_SYNFM Chaperone protein dnaJ OS=Syntrophobacter f... 30 7.4 sp|Q03FR6|DNAJ_PEDPA Chaperone protein dnaJ OS=Pediococcus pento... 30 7.4 sp|Q9HRY3|DNAJ_HALSA Chaperone protein dnaJ OS=Halobacterium sal... 30 7.4 sp|P28616|DNAJ_BORBU Chaperone protein dnaJ OS=Borrelia burgdorf... 30 7.4 sp|Q7M9T3|DNAJ_WOLSU Chaperone protein dnaJ OS=Wolinella succino... 30 9.6 sp|Q9KD71|DNAJ_BACHD Chaperone protein dnaJ OS=Bacillus halodura... 30 9.6 sp|A1ALM1|KUP_PELPD Probable potassium transport system protein ... 30 9.7 sp|Q62611|ILRL1_RAT Interleukin-1 receptor-like 1 OS=Rattus norv... 30 9.7
>sp|Q8KRC9|DNAJ_MYXXA Chaperone protein dnaJ OS=Myxococcus xanthus GN=dnaJ PE=3 SV=1 Length = 391
Score = 36.6 bits (83), Expect = 0.10 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = +3
Query: 231 CPGCKGSGRNKKNGNLF-ERWKCFDCQGFGLVS--CPSCGTGGLTPE 362 C C G+GR +++G+LF C +C G G + CP CG G+ E Sbjct: 195 CNVCNGTGRARRSGSLFGGAGACPNCHGTGKAAPPCPQCGGAGVKEE 241
>sp|Q9W4S1|GRCR2_DROME Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster GN=CG12206 PE=2 SV=2 Length = 582
Score = 36.2 bits (82), Expect = 0.13 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%) Frame = +3
Query: 231 CPGCKGSGRNKKNGNL---FERWKCFDCQGFGLVSCPSC 338 CP C GS ++ + F KC +C GL+ CP+C Sbjct: 544 CPACNGSKKSMHRNHFTAEFVALKCMNCDEVGLIKCPNC 582
>sp|Q9Y2M2|CC032_HUMAN Uncharacterized protein C3orf32 OS=Homo sapiens GN=C3orf32 PE=2 SV=1 Length = 353
Score = 33.9 bits (76), Expect = 0.67 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = +3
Query: 228 ECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCPSC 338 EC C G GR +KC C G G V CPSC Sbjct: 154 ECHKCHGRGR----------YKCSGCHGAGTVRCPSC 180
>sp|P61441|DNAJ_LEPIN Chaperone protein dnaJ OS=Leptospira interrogans GN=dnaJ PE=3 SV=1 Length = 372
Score = 33.5 bits (75), Expect = 0.87 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = +3
Query: 231 CPGCKGSGRNKKNGNLFE-RWKCFDCQGFGLV---SCPSCGTGGLTPEQR 368 CP C GSG+ ++ F C C+G G + C SCG GL ++R Sbjct: 170 CPDCGGSGQIRRTQGFFSVATTCPTCRGKGTIISNPCRSCGGQGLQEKRR 219
>sp|P61440|DNAJ_LEPIC Chaperone protein dnaJ OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dnaJ PE=3 SV=1 Length = 372
Score = 33.5 bits (75), Expect = 0.87 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = +3
Query: 231 CPGCKGSGRNKKNGNLFE-RWKCFDCQGFGLV---SCPSCGTGGLTPEQR 368 CP C GSG+ ++ F C C+G G + C SCG GL ++R Sbjct: 170 CPDCGGSGQIRRTQGFFSVATTCPTCRGKGTIISNPCRSCGGQGLQEKRR 219
>sp|Q9VNL4|GRCR1_DROME Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melanogaster GN=CG31559 PE=1 SV=2 Length = 454
Score = 32.7 bits (73), Expect = 1.5 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = +3
Query: 231 CPGCKGSGRNKKNGNL---FERWKCFDCQGFGLVSCPSC 338 CP C GS ++ + F KC +C GLV C +C Sbjct: 416 CPSCNGSKKSVHRNHFTAEFVALKCMNCDEVGLVKCHNC 454
>sp|Q8A8C3|DNAJ_BACTN Chaperone protein dnaJ OS=Bacteroides thetaiotaomicron GN=dnaJ PE=3 SV=1 Length = 396
Score = 32.7 bits (73), Expect = 1.5 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 8/49 (16%) Frame = +3
Query: 231 CPGCKGSG---RNKKN--GNLFERWKCFDCQGFGLV---SCPSCGTGGL 353 CP CKGSG RN++ G + R C C G G + C CG G+ Sbjct: 184 CPTCKGSGSVIRNQQTILGTMQTRTTCPTCNGEGKIIKNKCKECGGDGI 232
>sp|Q97BG9|DNAJ_THEVO Chaperone protein dnaJ OS=Thermoplasma volcanium GN=dnaJ PE=3 SV=1 Length = 365
Score = 32.3 bits (72), Expect = 1.9 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 15/64 (23%) Frame = +3
Query: 231 CPGCKGSGRNKKNGNLFERWKCFDCQGFG---------------LVSCPSCGTGGLTPEQ 365 CP CKG+G KNG L C C G G + +C +CG G PE+ Sbjct: 152 CPDCKGTG--AKNGKLI---TCPTCHGTGQQRVVRGQGFFRMVTVTTCNTCGGKGRIPEE 206
Query: 366 RGER 377 + R Sbjct: 207 KCPR 210
>sp|Q2VYT0|DNAJ_MAGMM Chaperone protein dnaJ OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dnaJ PE=3 SV=1 Length = 383
Score = 32.3 bits (72), Expect = 1.9 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%) Frame = +3
Query: 225 VECPGCKGSGRNKKNGNLF--ERWKCFDCQGFGLV---SCPSCGTGGLTPEQR 368 V C C G G+ ++ F ER C CQG G + C SCG G T +++ Sbjct: 165 VTCSACHGHGKVRQQQGFFTIER-TCPTCQGMGKIIKDPCRSCGGSGRTRKEK 216
>sp|Q8C3L1|CC032_MOUSE Uncharacterized protein C3orf32 homolog OS=Mus musculus PE=2 SV=1 Length = 340
Score = 32.0 bits (71), Expect = 2.5 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +3
Query: 228 ECPGCKGSGRNKKNGNLFERWKCFDCQGFGLVSCPSC 338 EC C G GR +KC C G G+V C SC Sbjct: 177 ECHKCHGRGR----------YKCSGCHGAGMVRCSSC 203
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6U3Z1 |
Definition |
tr|B6U3Z1|B6U3Z1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
52 |
Score (bit) |
112.0 |
E-value |
1.0e-23 |
Report |
|