DK962667 |
Clone id |
TST39A01NGRL0014_H19 |
Library |
TST39 |
Length |
615 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_H19. 5' end sequence. |
Accession |
DK962667 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCAAGTGAGCTGCGATGGCAGCTCCTTCGCGACCCAATGTTGCCAGAGCCAGGTAGTCCG CGATGGTTTTTCTCACCAAAGGTTCTTCCACACGGCGGGCTCTGGTGGGTCTGTGTGTGG CAGCCTTGTTCCTTGCCTGCATCTCATTACAGACGCACATCTTCTGGTCTGCTGATGACG GGGCCGCCAAAGAGCACGAAGAGCACTGGATCTCAGCGAAGCACCCTCACAAGTTCAGCT TCGTTATCAAGCTTCTCACTTATGACCGCCTTCACTCACTCATTCGATGCCTTAATTCTC TTGCCGCTGCGGATTACGGCATGCAAGTAGTTAAGCTCCATGTGTATATTGATCACTTCC CCCACAGTGATATGTCGCTGTCATCGCCGTCGTCAAAATCATCATTACCTTCTGGATCAT CTGTAGAAAACAAGCTCCAGGAATCACATGCCATTCTTGATTATGTTGATCAGTTTACAT GGATTCATGGTCCCAAGGAAATACACTACAGAACACAGAATGCAGGTCTGCAAGGGCAAT GGTTGGAAGCGTGGTGGCCAGCTTCAGACCATGAGTTTGCTTTTATGGTTGAAGATGACA TGTTCGTATCCCCAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46525 |
Definition |
sp|P46525|CS120_WHEAT Cold-shock protein CS120 OS=Triticum aestivum |
Align length |
36 |
Score (bit) |
34.3 |
E-value |
0.52 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PS85 |
Definition |
tr|A7PS85|A7PS85_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
134 |
Score (bit) |
157.0 |
E-value |
4.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962667|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_H19, 5' (615 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PS85|A7PS85_VITVI Chromosome chr14 scaffold_27, whole genom... 157 4e-37 tr|Q9FMN8|Q9FMN8_ARATH Genomic DNA, chromosome 5, P1 clone:MXC9 ... 144 3e-33 tr|A4Q7Q3|A4Q7Q3_MEDTR Sugar transporter superfamily OS=Medicago... 135 2e-30 tr|A9TT64|A9TT64_PHYPA Predicted protein (Fragment) OS=Physcomit... 124 6e-27 tr|Q9ARZ1|Q9ARZ1_ORYSJ OSJNBa0004B13.7 protein (Putative unchara... 120 8e-26 tr|A2WNJ8|A2WNJ8_ORYSI Putative uncharacterized protein OS=Oryza... 117 4e-25 tr|Q4D3G6|Q4D3G6_TRYCR Putative uncharacterized protein OS=Trypa... 62 3e-08 tr|Q4DMC0|Q4DMC0_TRYCR Putative uncharacterized protein OS=Trypa... 61 6e-08 tr|Q9FF50|Q9FF50_ARATH Arabidopsis thaliana genomic DNA, chromos... 59 2e-07 tr|Q8GYZ9|Q8GYZ9_ARATH Putative uncharacterized protein At5g6070... 59 2e-07 tr|A9RS64|A9RS64_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06 tr|A9RJV3|A9RJV3_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05 tr|A7NZL0|A7NZL0_VITVI Chromosome chr6 scaffold_3, whole genome ... 53 1e-05 tr|A5B9U1|A5B9U1_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05 tr|B5RHS8|B5RHS8_MUSBA Glycosyl transferase family 2 protein OS=... 52 2e-05 tr|A9RC19|A9RC19_PHYPA Predicted protein OS=Physcomitrella paten... 51 5e-05 tr|Q948G5|Q948G5_ORYSA Putative uncharacterized protein OSJNBa00... 49 3e-04 tr|Q6K8F2|Q6K8F2_ORYSJ Glycosyltransferase protein 2-like (Putat... 49 3e-04 tr|A2XAR8|A2XAR8_ORYSI Putative uncharacterized protein OS=Oryza... 49 3e-04 tr|A9VAR4|A9VAR4_MONBE Predicted protein OS=Monosiga brevicollis... 38 0.54 tr|B1QLN8|B1QLN8_CLOBO Nitrogenase iron protein OS=Clostridium b... 36 2.0 tr|B1KWC9|B1KWC9_CLOBM Nitrogenase iron protein OS=Clostridium b... 35 2.7 tr|B1IEU7|B1IEU7_CLOBK Nitrogenase iron protein OS=Clostridium b... 35 2.7 tr|A7GB78|A7GB78_CLOBL Nitrogenase iron protein OS=Clostridium b... 35 3.5 tr|A7FRU7|A7FRU7_CLOB1 Nitrogenase iron protein OS=Clostridium b... 35 3.5 tr|A5HZN3|A5HZN3_CLOBH Nitrogenase iron protein OS=Clostridium b... 35 3.5 tr|B1Q6E9|B1Q6E9_CLOBO Nitrogenase iron protein OS=Clostridium b... 35 3.5 tr|O65216|O65216_WHEAT COR39 OS=Triticum aestivum GN=cor39 PE=2 ... 34 5.9 tr|B4KXD5|B4KXD5_DROMO GI12558 OS=Drosophila mojavensis GN=GI125... 34 5.9 tr|Q8DM33|Q8DM33_THEEB Tll0290 protein OS=Thermosynechococcus el... 34 6.0
>tr|A7PS85|A7PS85_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022805001 PE=4 SV=1 Length = 633
Score = 157 bits (398), Expect = 4e-37 Identities = 74/134 (55%), Positives = 90/134 (67%) Frame = +3
Query: 213 SAKHPHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXX 392 S P FSF++K+LT+DRL SL RCL SLAAA YG V LH+Y+DHFPH+D Sbjct: 56 SIPSPSNFSFILKVLTFDRLSSLSRCLRSLAAAHYGRDTVHLHIYVDHFPHAD------- 108
Query: 393 XXXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDH 572 ++ KL ES IL+++D F W G K +HYRT N GLQ QWLEAWWP+SDH Sbjct: 109 -------NLLLDQKLDESRRILEFIDGFDWKFGQKVVHYRTGNVGLQAQWLEAWWPSSDH 161
Query: 573 EFAFMVEDDMFVSP 614 EFAF+VEDD+ VSP Sbjct: 162 EFAFVVEDDLEVSP 175
>tr|Q9FMN8|Q9FMN8_ARATH Genomic DNA, chromosome 5, P1 clone:MXC9 (At5g12260/MXC9_22) OS=Arabidopsis thaliana GN=At5g12260 PE=2 SV=1 Length = 624
Score = 144 bits (364), Expect = 3e-33 Identities = 88/206 (42%), Positives = 115/206 (55%), Gaps = 6/206 (2%) Frame = +3
Query: 15 MAAPSRPNVARAR*SAMVFLTKGSSTRRALVGL-CVAALFL-ACISLQTHIFWSADDGAA 188 M + SR R AMVF + ++ L C++ + L +S TH ++ G Sbjct: 1 MVSQSRRRNPTLRSMAMVFAQPKKNLLPLILFLFCISVIILLVLVSETTH----SNAGRG 56
Query: 189 KEHEEHWISAKHPHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQV----VKLHVYIDH 356 ++ P F+F+IK+LT++RLHSL RCL SL+AADYG+ + LHVYIDH Sbjct: 57 TTFRRNY---NDPAPFTFLIKVLTFNRLHSLSRCLRSLSAADYGVSGDRGRIHLHVYIDH 113
Query: 357 FPHSDMXXXXXXXXXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQG 536 F VE+ LQ + IL +VD+F W G K +HYRT NAGLQ Sbjct: 114 F-------------NLARNDTPVEDNLQIAREILGFVDRFEWRFGEKVVHYRTDNAGLQA 160
Query: 537 QWLEAWWPASDHEFAFMVEDDMFVSP 614 QWLEAWWP SDHEFAF+VEDD+ VSP Sbjct: 161 QWLEAWWPISDHEFAFVVEDDLEVSP 186
>tr|A4Q7Q3|A4Q7Q3_MEDTR Sugar transporter superfamily OS=Medicago truncatula GN=MtrDRAFT_AC183502g15v2 PE=4 SV=1 Length = 622
Score = 135 bits (339), Expect = 2e-30 Identities = 70/126 (55%), Positives = 83/126 (65%) Frame = +3
Query: 234 FSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXXXXXXXXX 413 F+F+IK+L ++RL S+ RCL SLAAADY V LHVYIDHF + Sbjct: 58 FTFLIKVLAFNRLDSVSRCLRSLAAADYLGDRVHLHVYIDHFAPLN-------------- 103
Query: 414 XXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHEFAFMVE 593 V+ KL ESH ILD+VD F W +G K +HYRT N GLQ QWLEAWWP SD EFAF+VE Sbjct: 104 NSDVDLKLIESHRILDFVDVFEWKYGEKVVHYRTGNVGLQAQWLEAWWPGSDDEFAFVVE 163
Query: 594 DDMFVS 611 DD+ VS Sbjct: 164 DDLEVS 169
>tr|A9TT64|A9TT64_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_2298 PE=4 SV=1 Length = 379
Score = 124 bits (310), Expect = 6e-27 Identities = 61/126 (48%), Positives = 77/126 (61%) Frame = +3
Query: 234 FSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXXXXXXXXX 413 F V+K+L ++RL SL RCL SLA ADYG V + ++IDH + D Sbjct: 1 FRVVLKVLAFNRLESLSRCLRSLAKADYGGDRVNIQIFIDHIRYDDAKGNETCKNV---- 56
Query: 414 XXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHEFAFMVE 593 L+E H IL++VD F W HG KEIHYR+QN GLQ QW+E+WWP EFAF+VE Sbjct: 57 ------SLEEFHKILEFVDNFWWRHGTKEIHYRSQNVGLQTQWIESWWPTDLDEFAFIVE 110
Query: 594 DDMFVS 611 DD+ VS Sbjct: 111 DDVEVS 116
>tr|Q9ARZ1|Q9ARZ1_ORYSJ OSJNBa0004B13.7 protein (Putative uncharacterized protein) (Os01g0283000 protein) (Putative uncharacterized protein P0581F09.17) OS=Oryza sativa subsp. japonica GN=OSJNBa0004B13.7 PE=4 SV=1 Length = 609
Score = 120 bits (300), Expect = 8e-26 Identities = 64/130 (49%), Positives = 73/130 (56%) Frame = +3
Query: 225 PHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXXXXXX 404 P +FS +IK+L YDR L RCL SLAAADY V LHV +DH P + Sbjct: 47 PRRFSLLIKVLAYDRPGPLRRCLRSLAAADYAGDRVALHVLVDH-PRPNA---------- 95
Query: 405 XXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHEFAF 584 L S IL D W HG K +HYR NAGLQ QW+EAWWP SD EFAF Sbjct: 96 ---------SLDASREILAEADALRWPHGEKRVHYRAANAGLQAQWIEAWWPGSDDEFAF 146
Query: 585 MVEDDMFVSP 614 +VEDD+ VSP Sbjct: 147 VVEDDLEVSP 156
>tr|A2WNJ8|A2WNJ8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01427 PE=4 SV=1 Length = 609
Score = 117 bits (294), Expect = 4e-25 Identities = 63/130 (48%), Positives = 73/130 (56%) Frame = +3
Query: 225 PHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXXXXXX 404 P +FS +IK+L YDR L RCL SLAAADY V L+V +DH P + Sbjct: 47 PRRFSLLIKVLAYDRPGPLRRCLRSLAAADYAGDRVALYVLVDH-PRPNA---------- 95
Query: 405 XXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHEFAF 584 L S IL D W HG K +HYR NAGLQ QW+EAWWP SD EFAF Sbjct: 96 ---------SLDASREILAEADALRWPHGEKRVHYRAANAGLQAQWIEAWWPGSDDEFAF 146
Query: 585 MVEDDMFVSP 614 +VEDD+ VSP Sbjct: 147 VVEDDLEVSP 156
>tr|Q4D3G6|Q4D3G6_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053503981.70 PE=4 SV=1 Length = 381
Score = 61.6 bits (148), Expect = 3e-08 Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 3/133 (2%) Frame = +3
Query: 225 PHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVV---KLHVYIDHFPHSDMXXXXXXX 395 P + I + Y R L + LNSL +DY V L V++D + + Sbjct: 63 PSSHEYRIFVFAYARPDGLRKTLNSLLESDYSKAPVGSLTLEVFVDFRKYESLQMQ---- 118
Query: 396 XXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHE 575 Q+ IL ++ F W +G +IH R N GL+ +EAW P SD E Sbjct: 119 --------------QKQSGILQFLRTFNWPYGQYKIHRRLTNVGLRLSIMEAWQPTSDRE 164
Query: 576 FAFMVEDDMFVSP 614 A EDD+ VSP Sbjct: 165 VAAFFEDDVVVSP 177
>tr|Q4DMC0|Q4DMC0_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053504131.130 PE=4 SV=1 Length = 381
Score = 60.8 bits (146), Expect = 6e-08 Identities = 41/133 (30%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Frame = +3
Query: 225 PHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVV---KLHVYIDHFPHSDMXXXXXXX 395 P + I + Y R L + L SL +DY V L V++D H + Sbjct: 63 PSSHEYRIFVFAYARPDGLRKTLYSLLESDYSKAPVGSLTLEVFVDFRKHESLQMQ---- 118
Query: 396 XXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHE 575 Q+ IL ++ F W +G +IH R N GL+ +EAW P SD E Sbjct: 119 --------------QKQSGILQFLRTFKWPYGQYKIHQRLTNVGLRISIMEAWQPTSDRE 164
Query: 576 FAFMVEDDMFVSP 614 A EDD+ VSP Sbjct: 165 VAAFFEDDVVVSP 177
>tr|Q9FF50|Q9FF50_ARATH Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUP24 OS=Arabidopsis thaliana PE=4 SV=1 Length = 932
Score = 58.9 bits (141), Expect = 2e-07 Identities = 54/198 (27%), Positives = 84/198 (42%) Frame = +3
Query: 21 APSRPNVARAR*SAMVFLTKGSSTRRALVGLCVAALFLACISLQTHIFWSADDGAAKEHE 200 A + PNV +A + T+ +S ALV L A++ + + W AD Sbjct: 546 ADADPNVKKA----LKMATETNSNGTALVLLPRASI--------SKVLWMAD--LRSTAL 591
Query: 201 EHWISAKHPHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXX 380 +W +K + ++T +R SL+R L SL+ A Y + L +D Sbjct: 592 PNW------NKMRVSVNIITQNRAQSLLRLLRSLSNAYYLGDEISLSFNMD--------- 636
Query: 381 XXXXXXXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWP 560 +K+ E ++ V F W HGPK + R GL E+W+P Sbjct: 637 ----------------SKVDEE--TINVVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYP 678
Query: 561 ASDHEFAFMVEDDMFVSP 614 ASD +F ++EDD+ VSP Sbjct: 679 ASDDDFGLLLEDDIEVSP 696
>tr|Q8GYZ9|Q8GYZ9_ARATH Putative uncharacterized protein At5g60700/mup24_110 OS=Arabidopsis thaliana GN=At5g60700/mup24_110 PE=2 SV=1 Length = 668
Score = 58.9 bits (141), Expect = 2e-07 Identities = 54/198 (27%), Positives = 84/198 (42%) Frame = +3
Query: 21 APSRPNVARAR*SAMVFLTKGSSTRRALVGLCVAALFLACISLQTHIFWSADDGAAKEHE 200 A + PNV +A + T+ +S ALV L A++ + + W AD Sbjct: 282 ADADPNVKKA----LKMATETNSNGTALVLLPRASI--------SKVLWMAD--LRSTAL 327
Query: 201 EHWISAKHPHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXX 380 +W +K + ++T +R SL+R L SL+ A Y + L +D Sbjct: 328 PNW------NKMRVSVNIITQNRAQSLLRLLRSLSNAYYLGDEISLSFNMD--------- 372
Query: 381 XXXXXXXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWP 560 +K+ E ++ V F W HGPK + R GL E+W+P Sbjct: 373 ----------------SKVDEE--TINVVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYP 414
Query: 561 ASDHEFAFMVEDDMFVSP 614 ASD +F ++EDD+ VSP Sbjct: 415 ASDDDFGLLLEDDIEVSP 432
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