DK962667
Clone id TST39A01NGRL0014_H19
Library
Length 615
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_H19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GCAAGTGAGCTGCGATGGCAGCTCCTTCGCGACCCAATGTTGCCAGAGCCAGGTAGTCCG
CGATGGTTTTTCTCACCAAAGGTTCTTCCACACGGCGGGCTCTGGTGGGTCTGTGTGTGG
CAGCCTTGTTCCTTGCCTGCATCTCATTACAGACGCACATCTTCTGGTCTGCTGATGACG
GGGCCGCCAAAGAGCACGAAGAGCACTGGATCTCAGCGAAGCACCCTCACAAGTTCAGCT
TCGTTATCAAGCTTCTCACTTATGACCGCCTTCACTCACTCATTCGATGCCTTAATTCTC
TTGCCGCTGCGGATTACGGCATGCAAGTAGTTAAGCTCCATGTGTATATTGATCACTTCC
CCCACAGTGATATGTCGCTGTCATCGCCGTCGTCAAAATCATCATTACCTTCTGGATCAT
CTGTAGAAAACAAGCTCCAGGAATCACATGCCATTCTTGATTATGTTGATCAGTTTACAT
GGATTCATGGTCCCAAGGAAATACACTACAGAACACAGAATGCAGGTCTGCAAGGGCAAT
GGTTGGAAGCGTGGTGGCCAGCTTCAGACCATGAGTTTGCTTTTATGGTTGAAGATGACA
TGTTCGTATCCCCAC
■■Homology search results ■■ -
sp_hit_id P46525
Definition sp|P46525|CS120_WHEAT Cold-shock protein CS120 OS=Triticum aestivum
Align length 36
Score (bit) 34.3
E-value 0.52
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962667|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_H19, 5'
(615 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P46525|CS120_WHEAT Cold-shock protein CS120 OS=Triticum aesti... 34 0.52
sp|P46526|CS66_WHEAT Cold shock protein CS66 OS=Triticum aestivu... 33 0.89
sp|Q9P4W7|APC5_SCHPO Anaphase-promoting complex subunit 5 OS=Sch... 33 1.2
sp|Q8N2S1|LTBP4_HUMAN Latent-transforming growth factor beta-bin... 30 9.9

>sp|P46525|CS120_WHEAT Cold-shock protein CS120 OS=Triticum aestivum
GN=CS120 PE=2 SV=2
Length = 391

Score = 34.3 bits (77), Expect = 0.52
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2

Query: 137 GKEQGCHTQTHQSPPCGRTFGEKNHRGLPGSGNIGS 30
G++ T TH +P G T+GE+ H G+ G+G G+
Sbjct: 120 GQQGHTGTATHGTPATGGTYGEQGHTGVTGTGTHGT 155


>sp|P46526|CS66_WHEAT Cold shock protein CS66 OS=Triticum aestivum
GN=CS66 PE=2 SV=1
Length = 469

Score = 33.5 bits (75), Expect = 0.89
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -2

Query: 137 GKEQGCHTQTHQSPPCGRTFGEKNHRGLPGSGNIGS 30
G++ T TH +P G T+GE+ H G+ G+G G+
Sbjct: 198 GQQGHFATGTHGTPATGGTYGEQGHAGVTGTGTHGT 233


>sp|Q9P4W7|APC5_SCHPO Anaphase-promoting complex subunit 5
OS=Schizosaccharomyces pombe GN=apc5 PE=1 SV=2
Length = 737

Score = 33.1 bits (74), Expect = 1.2
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 13/67 (19%)
Frame = +3

Query: 210 ISAKHPHKFSFVIKLLTYDRLHSLI-------------RCLNSLAAADYGMQVVKLHVYI 350
+ +H KF + L ++LH L+ + LNS + DY V L Y
Sbjct: 221 VQIEHMQKFGCALPLEMKEKLHDLLEVEENNLNTSYYCKFLNSWFSGDYQQSVENLCRYF 280

Query: 351 DHFPHSD 371
DH HSD
Sbjct: 281 DHIMHSD 287


>sp|Q8N2S1|LTBP4_HUMAN Latent-transforming growth factor
beta-binding protein 4 OS=Homo sapiens GN=LTBP4 PE=1
SV=2
Length = 1624

Score = 30.0 bits (66), Expect = 9.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1

Query: 231 CEG-ASLRSSALRALWRPRHQQTRRCASVMRCRQGTRLPHTDPPEPAVWK 85
C G S RS +RA R R Q ++CA RC +P P P+V K
Sbjct: 56 CPGQTSRRSRCIRAFCRVRSCQPKKCAGPQRCL--NPVPAVPSPSPSVRK 103


tr_hit_id A7PS85
Definition tr|A7PS85|A7PS85_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera
Align length 134
Score (bit) 157.0
E-value 4.0e-37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962667|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_H19, 5'
(615 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PS85|A7PS85_VITVI Chromosome chr14 scaffold_27, whole genom... 157 4e-37
tr|Q9FMN8|Q9FMN8_ARATH Genomic DNA, chromosome 5, P1 clone:MXC9 ... 144 3e-33
tr|A4Q7Q3|A4Q7Q3_MEDTR Sugar transporter superfamily OS=Medicago... 135 2e-30
tr|A9TT64|A9TT64_PHYPA Predicted protein (Fragment) OS=Physcomit... 124 6e-27
tr|Q9ARZ1|Q9ARZ1_ORYSJ OSJNBa0004B13.7 protein (Putative unchara... 120 8e-26
tr|A2WNJ8|A2WNJ8_ORYSI Putative uncharacterized protein OS=Oryza... 117 4e-25
tr|Q4D3G6|Q4D3G6_TRYCR Putative uncharacterized protein OS=Trypa... 62 3e-08
tr|Q4DMC0|Q4DMC0_TRYCR Putative uncharacterized protein OS=Trypa... 61 6e-08
tr|Q9FF50|Q9FF50_ARATH Arabidopsis thaliana genomic DNA, chromos... 59 2e-07
tr|Q8GYZ9|Q8GYZ9_ARATH Putative uncharacterized protein At5g6070... 59 2e-07
tr|A9RS64|A9RS64_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06
tr|A9RJV3|A9RJV3_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05
tr|A7NZL0|A7NZL0_VITVI Chromosome chr6 scaffold_3, whole genome ... 53 1e-05
tr|A5B9U1|A5B9U1_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05
tr|B5RHS8|B5RHS8_MUSBA Glycosyl transferase family 2 protein OS=... 52 2e-05
tr|A9RC19|A9RC19_PHYPA Predicted protein OS=Physcomitrella paten... 51 5e-05
tr|Q948G5|Q948G5_ORYSA Putative uncharacterized protein OSJNBa00... 49 3e-04
tr|Q6K8F2|Q6K8F2_ORYSJ Glycosyltransferase protein 2-like (Putat... 49 3e-04
tr|A2XAR8|A2XAR8_ORYSI Putative uncharacterized protein OS=Oryza... 49 3e-04
tr|A9VAR4|A9VAR4_MONBE Predicted protein OS=Monosiga brevicollis... 38 0.54
tr|B1QLN8|B1QLN8_CLOBO Nitrogenase iron protein OS=Clostridium b... 36 2.0
tr|B1KWC9|B1KWC9_CLOBM Nitrogenase iron protein OS=Clostridium b... 35 2.7
tr|B1IEU7|B1IEU7_CLOBK Nitrogenase iron protein OS=Clostridium b... 35 2.7
tr|A7GB78|A7GB78_CLOBL Nitrogenase iron protein OS=Clostridium b... 35 3.5
tr|A7FRU7|A7FRU7_CLOB1 Nitrogenase iron protein OS=Clostridium b... 35 3.5
tr|A5HZN3|A5HZN3_CLOBH Nitrogenase iron protein OS=Clostridium b... 35 3.5
tr|B1Q6E9|B1Q6E9_CLOBO Nitrogenase iron protein OS=Clostridium b... 35 3.5
tr|O65216|O65216_WHEAT COR39 OS=Triticum aestivum GN=cor39 PE=2 ... 34 5.9
tr|B4KXD5|B4KXD5_DROMO GI12558 OS=Drosophila mojavensis GN=GI125... 34 5.9
tr|Q8DM33|Q8DM33_THEEB Tll0290 protein OS=Thermosynechococcus el... 34 6.0

>tr|A7PS85|A7PS85_VITVI Chromosome chr14 scaffold_27, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00022805001
PE=4 SV=1
Length = 633

Score = 157 bits (398), Expect = 4e-37
Identities = 74/134 (55%), Positives = 90/134 (67%)
Frame = +3

Query: 213 SAKHPHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXX 392
S P FSF++K+LT+DRL SL RCL SLAAA YG V LH+Y+DHFPH+D
Sbjct: 56 SIPSPSNFSFILKVLTFDRLSSLSRCLRSLAAAHYGRDTVHLHIYVDHFPHAD------- 108

Query: 393 XXXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDH 572
++ KL ES IL+++D F W G K +HYRT N GLQ QWLEAWWP+SDH
Sbjct: 109 -------NLLLDQKLDESRRILEFIDGFDWKFGQKVVHYRTGNVGLQAQWLEAWWPSSDH 161

Query: 573 EFAFMVEDDMFVSP 614
EFAF+VEDD+ VSP
Sbjct: 162 EFAFVVEDDLEVSP 175


>tr|Q9FMN8|Q9FMN8_ARATH Genomic DNA, chromosome 5, P1 clone:MXC9
(At5g12260/MXC9_22) OS=Arabidopsis thaliana GN=At5g12260
PE=2 SV=1
Length = 624

Score = 144 bits (364), Expect = 3e-33
Identities = 88/206 (42%), Positives = 115/206 (55%), Gaps = 6/206 (2%)
Frame = +3

Query: 15 MAAPSRPNVARAR*SAMVFLTKGSSTRRALVGL-CVAALFL-ACISLQTHIFWSADDGAA 188
M + SR R AMVF + ++ L C++ + L +S TH ++ G
Sbjct: 1 MVSQSRRRNPTLRSMAMVFAQPKKNLLPLILFLFCISVIILLVLVSETTH----SNAGRG 56

Query: 189 KEHEEHWISAKHPHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQV----VKLHVYIDH 356
++ P F+F+IK+LT++RLHSL RCL SL+AADYG+ + LHVYIDH
Sbjct: 57 TTFRRNY---NDPAPFTFLIKVLTFNRLHSLSRCLRSLSAADYGVSGDRGRIHLHVYIDH 113

Query: 357 FPHSDMXXXXXXXXXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQG 536
F VE+ LQ + IL +VD+F W G K +HYRT NAGLQ
Sbjct: 114 F-------------NLARNDTPVEDNLQIAREILGFVDRFEWRFGEKVVHYRTDNAGLQA 160

Query: 537 QWLEAWWPASDHEFAFMVEDDMFVSP 614
QWLEAWWP SDHEFAF+VEDD+ VSP
Sbjct: 161 QWLEAWWPISDHEFAFVVEDDLEVSP 186


>tr|A4Q7Q3|A4Q7Q3_MEDTR Sugar transporter superfamily OS=Medicago
truncatula GN=MtrDRAFT_AC183502g15v2 PE=4 SV=1
Length = 622

Score = 135 bits (339), Expect = 2e-30
Identities = 70/126 (55%), Positives = 83/126 (65%)
Frame = +3

Query: 234 FSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXXXXXXXXX 413
F+F+IK+L ++RL S+ RCL SLAAADY V LHVYIDHF +
Sbjct: 58 FTFLIKVLAFNRLDSVSRCLRSLAAADYLGDRVHLHVYIDHFAPLN-------------- 103

Query: 414 XXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHEFAFMVE 593
V+ KL ESH ILD+VD F W +G K +HYRT N GLQ QWLEAWWP SD EFAF+VE
Sbjct: 104 NSDVDLKLIESHRILDFVDVFEWKYGEKVVHYRTGNVGLQAQWLEAWWPGSDDEFAFVVE 163

Query: 594 DDMFVS 611
DD+ VS
Sbjct: 164 DDLEVS 169


>tr|A9TT64|A9TT64_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_2298 PE=4 SV=1
Length = 379

Score = 124 bits (310), Expect = 6e-27
Identities = 61/126 (48%), Positives = 77/126 (61%)
Frame = +3

Query: 234 FSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXXXXXXXXX 413
F V+K+L ++RL SL RCL SLA ADYG V + ++IDH + D
Sbjct: 1 FRVVLKVLAFNRLESLSRCLRSLAKADYGGDRVNIQIFIDHIRYDDAKGNETCKNV---- 56

Query: 414 XXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHEFAFMVE 593
L+E H IL++VD F W HG KEIHYR+QN GLQ QW+E+WWP EFAF+VE
Sbjct: 57 ------SLEEFHKILEFVDNFWWRHGTKEIHYRSQNVGLQTQWIESWWPTDLDEFAFIVE 110

Query: 594 DDMFVS 611
DD+ VS
Sbjct: 111 DDVEVS 116


>tr|Q9ARZ1|Q9ARZ1_ORYSJ OSJNBa0004B13.7 protein (Putative
uncharacterized protein) (Os01g0283000 protein)
(Putative uncharacterized protein P0581F09.17) OS=Oryza
sativa subsp. japonica GN=OSJNBa0004B13.7 PE=4 SV=1
Length = 609

Score = 120 bits (300), Expect = 8e-26
Identities = 64/130 (49%), Positives = 73/130 (56%)
Frame = +3

Query: 225 PHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXXXXXX 404
P +FS +IK+L YDR L RCL SLAAADY V LHV +DH P +
Sbjct: 47 PRRFSLLIKVLAYDRPGPLRRCLRSLAAADYAGDRVALHVLVDH-PRPNA---------- 95

Query: 405 XXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHEFAF 584
L S IL D W HG K +HYR NAGLQ QW+EAWWP SD EFAF
Sbjct: 96 ---------SLDASREILAEADALRWPHGEKRVHYRAANAGLQAQWIEAWWPGSDDEFAF 146

Query: 585 MVEDDMFVSP 614
+VEDD+ VSP
Sbjct: 147 VVEDDLEVSP 156


>tr|A2WNJ8|A2WNJ8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_01427 PE=4 SV=1
Length = 609

Score = 117 bits (294), Expect = 4e-25
Identities = 63/130 (48%), Positives = 73/130 (56%)
Frame = +3

Query: 225 PHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXXXXXXXXXX 404
P +FS +IK+L YDR L RCL SLAAADY V L+V +DH P +
Sbjct: 47 PRRFSLLIKVLAYDRPGPLRRCLRSLAAADYAGDRVALYVLVDH-PRPNA---------- 95

Query: 405 XXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHEFAF 584
L S IL D W HG K +HYR NAGLQ QW+EAWWP SD EFAF
Sbjct: 96 ---------SLDASREILAEADALRWPHGEKRVHYRAANAGLQAQWIEAWWPGSDDEFAF 146

Query: 585 MVEDDMFVSP 614
+VEDD+ VSP
Sbjct: 147 VVEDDLEVSP 156


>tr|Q4D3G6|Q4D3G6_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053503981.70 PE=4 SV=1
Length = 381

Score = 61.6 bits (148), Expect = 3e-08
Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Frame = +3

Query: 225 PHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVV---KLHVYIDHFPHSDMXXXXXXX 395
P + I + Y R L + LNSL +DY V L V++D + +
Sbjct: 63 PSSHEYRIFVFAYARPDGLRKTLNSLLESDYSKAPVGSLTLEVFVDFRKYESLQMQ---- 118

Query: 396 XXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHE 575
Q+ IL ++ F W +G +IH R N GL+ +EAW P SD E
Sbjct: 119 --------------QKQSGILQFLRTFNWPYGQYKIHRRLTNVGLRLSIMEAWQPTSDRE 164

Query: 576 FAFMVEDDMFVSP 614
A EDD+ VSP
Sbjct: 165 VAAFFEDDVVVSP 177


>tr|Q4DMC0|Q4DMC0_TRYCR Putative uncharacterized protein
OS=Trypanosoma cruzi GN=Tc00.1047053504131.130 PE=4 SV=1
Length = 381

Score = 60.8 bits (146), Expect = 6e-08
Identities = 41/133 (30%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
Frame = +3

Query: 225 PHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVV---KLHVYIDHFPHSDMXXXXXXX 395
P + I + Y R L + L SL +DY V L V++D H +
Sbjct: 63 PSSHEYRIFVFAYARPDGLRKTLYSLLESDYSKAPVGSLTLEVFVDFRKHESLQMQ---- 118

Query: 396 XXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWPASDHE 575
Q+ IL ++ F W +G +IH R N GL+ +EAW P SD E
Sbjct: 119 --------------QKQSGILQFLRTFKWPYGQYKIHQRLTNVGLRISIMEAWQPTSDRE 164

Query: 576 FAFMVEDDMFVSP 614
A EDD+ VSP
Sbjct: 165 VAAFFEDDVVVSP 177


>tr|Q9FF50|Q9FF50_ARATH Arabidopsis thaliana genomic DNA, chromosome
5, P1 clone:MUP24 OS=Arabidopsis thaliana PE=4 SV=1
Length = 932

Score = 58.9 bits (141), Expect = 2e-07
Identities = 54/198 (27%), Positives = 84/198 (42%)
Frame = +3

Query: 21 APSRPNVARAR*SAMVFLTKGSSTRRALVGLCVAALFLACISLQTHIFWSADDGAAKEHE 200
A + PNV +A + T+ +S ALV L A++ + + W AD
Sbjct: 546 ADADPNVKKA----LKMATETNSNGTALVLLPRASI--------SKVLWMAD--LRSTAL 591

Query: 201 EHWISAKHPHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXX 380
+W +K + ++T +R SL+R L SL+ A Y + L +D
Sbjct: 592 PNW------NKMRVSVNIITQNRAQSLLRLLRSLSNAYYLGDEISLSFNMD--------- 636

Query: 381 XXXXXXXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWP 560
+K+ E ++ V F W HGPK + R GL E+W+P
Sbjct: 637 ----------------SKVDEE--TINVVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYP 678

Query: 561 ASDHEFAFMVEDDMFVSP 614
ASD +F ++EDD+ VSP
Sbjct: 679 ASDDDFGLLLEDDIEVSP 696


>tr|Q8GYZ9|Q8GYZ9_ARATH Putative uncharacterized protein
At5g60700/mup24_110 OS=Arabidopsis thaliana
GN=At5g60700/mup24_110 PE=2 SV=1
Length = 668

Score = 58.9 bits (141), Expect = 2e-07
Identities = 54/198 (27%), Positives = 84/198 (42%)
Frame = +3

Query: 21 APSRPNVARAR*SAMVFLTKGSSTRRALVGLCVAALFLACISLQTHIFWSADDGAAKEHE 200
A + PNV +A + T+ +S ALV L A++ + + W AD
Sbjct: 282 ADADPNVKKA----LKMATETNSNGTALVLLPRASI--------SKVLWMAD--LRSTAL 327

Query: 201 EHWISAKHPHKFSFVIKLLTYDRLHSLIRCLNSLAAADYGMQVVKLHVYIDHFPHSDMXX 380
+W +K + ++T +R SL+R L SL+ A Y + L +D
Sbjct: 328 PNW------NKMRVSVNIITQNRAQSLLRLLRSLSNAYYLGDEISLSFNMD--------- 372

Query: 381 XXXXXXXXXXXXXXVENKLQESHAILDYVDQFTWIHGPKEIHYRTQNAGLQGQWLEAWWP 560
+K+ E ++ V F W HGPK + R GL E+W+P
Sbjct: 373 ----------------SKVDEE--TINVVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYP 414

Query: 561 ASDHEFAFMVEDDMFVSP 614
ASD +F ++EDD+ VSP
Sbjct: 415 ASDDDFGLLLEDDIEVSP 432