DK962663 |
Clone id |
TST39A01NGRL0014_H15 |
Library |
TST39 |
Length |
700 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_H15. 5' end sequence. |
Accession |
DK962663 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
AAAAGTTGGTGCAAGTGGCGGTGTGGGTGAGGTTCGATACTCATAAGCTGCTGATGCCCA CTAGTAGTAGTACCGCTAGCTGAAGCCTGAAGACGAAGCCATGCGTTCTGCTCCTATCAA CAGTGCAGAAGCAAATTAAACGGCAAAGCTACCATTTCCCATAATATTATGGCGCAGTCT GATCATGAGCGTGCATTGGCCCTCATTCAGGATCTTACCAGCATTGCAGACACTGTCCAG GACGCTATTCTGTCTCAGATCCTTGCGCAGAATTCAGACACCGAGTATCTACGCCACATA CTCGGCCAGGCCGGCCTGCCGTTTATCGAATCCCCTCATGTCCAGCCTGACACATTTAAG CGCATTGCTCCTCTTACATGCTATGAGGACATTTTTCCTTACATCCAGCACATTGCAGAT GGCGATAAGTCGCCCATTCTCACGAATCTGCCTGTGACGGAGCTCCTTAAAAGGTATGTA TACGCGCTCCGTGTTCTATTACTTGTCGAAGAAGCTAGCTCTACTTCTACATGTTCAAGG TAGCCCTTTTTGCTGAAGCTGTATCTAATTAAGTTAGCCCTTTTGCATAATTGAACTAGG TAATGCAGGCAATCAATGTAATCAATTATGGTACCTTGTCTAACAGAATATGAATGAGTT TGATTCTTCCTAGTTTTAATATAGTGGAACTCATCAATGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O82333 |
Definition |
sp|O82333|GH31_ARATH Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana |
Align length |
91 |
Score (bit) |
78.6 |
E-value |
3.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6EBQ2 |
Definition |
tr|B6EBQ2|B6EBQ2_MAIZE Indole-3-acetic acid amido synthetase OS=Zea mays |
Align length |
97 |
Score (bit) |
79.7 |
E-value |
2.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962663|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_H15, 5' (700 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6EBQ2|B6EBQ2_MAIZE Indole-3-acetic acid amido synthetase OS=... 80 2e-13 tr|Q0GUM1|Q0GUM1_ARATH Auxin-responsive GH3-like OS=Arabidopsis ... 75 3e-12 tr|A7PXP4|A7PXP4_VITVI Chromosome chr12 scaffold_36, whole genom... 74 9e-12 tr|A7P139|A7P139_VITVI Chromosome chr19 scaffold_4, whole genome... 74 1e-11 tr|A5BXN9|A5BXN9_VITVI Putative uncharacterized protein OS=Vitis... 74 1e-11 tr|A7PLK7|A7PLK7_VITVI Chromosome chr7 scaffold_20, whole genome... 73 2e-11 tr|A5C238|A5C238_VITVI Putative uncharacterized protein OS=Vitis... 73 2e-11 tr|A3BLG6|A3BLG6_ORYSJ Putative uncharacterized protein OS=Oryza... 72 3e-11 tr|B6U4E2|B6U4E2_MAIZE Indole-3-acetic acid-amido synthetase GH3... 72 4e-11 tr|B6EBQ1|B6EBQ1_MAIZE Indole-3-acetic acid amido synthetase OS=... 72 4e-11 tr|B8B7R4|B8B7R4_ORYSI Putative uncharacterized protein OS=Oryza... 71 6e-11 tr|B0VXR3|B0VXR3_9SOLA JAR1-like protein OS=Nicotiana attenuata ... 71 6e-11 tr|A7QT99|A7QT99_VITVI Chromosome chr1 scaffold_166, whole genom... 71 8e-11 tr|A5APU4|A5APU4_VITVI Putative uncharacterized protein OS=Vitis... 71 8e-11 tr|Q3LFT5|Q3LFT5_NICGU Putative auxin-regulated protein OS=Nicot... 70 1e-10 tr|Q9XEY0|Q9XEY0_TOBAC Nt-gh3 deduced protein OS=Nicotiana tabac... 70 1e-10 tr|Q0D575|Q0D575_ORYSJ Os07g0576100 protein OS=Oryza sativa subs... 70 1e-10 tr|A2YMY6|A2YMY6_ORYSI Putative uncharacterized protein OS=Oryza... 70 1e-10 tr|B5BRE3|B5BRE3_ARATH IAA-amido synthetase OS=Arabidopsis thali... 69 2e-10 tr|Q0DGZ2|Q0DGZ2_ORYSJ Os05g0500900 protein OS=Oryza sativa subs... 69 3e-10 tr|A2Y678|A2Y678_ORYSI Putative uncharacterized protein OS=Oryza... 69 3e-10 tr|Q6QUQ3|Q6QUQ3_CAPCH Auxin and ethylene responsive GH3-like pr... 69 4e-10 tr|Q0JIP7|Q0JIP7_ORYSJ cDNA clone:001-114-D12, full insert seque... 69 4e-10 tr|Q05680|Q05680_SOYBN Auxin-responsive GH3 product OS=Glycine m... 69 4e-10 tr|B5X4Z8|B5X4Z8_ARATH At5g54510 OS=Arabidopsis thaliana PE=2 SV=1 69 4e-10 tr|B8A314|B8A314_MAIZE Putative uncharacterized protein OS=Zea m... 68 6e-10 tr|A7QW67|A7QW67_VITVI Chromosome chr3 scaffold_199, whole genom... 68 6e-10 tr|Q9LYU1|Q9LYU1_ARATH Auxin-responsive-like protein (Auxin-resp... 67 8e-10 tr|O24125|O24125_TOBAC BYJ14 (Fragment) OS=Nicotiana tabacum PE=... 67 1e-09 tr|A2Q639|A2Q639_MEDTR GH3 auxin-responsive promoter OS=Medicago... 67 1e-09
>tr|B6EBQ2|B6EBQ2_MAIZE Indole-3-acetic acid amido synthetase OS=Zea mays GN=GH3 PE=2 SV=1 Length = 610
Score = 79.7 bits (195), Expect = 2e-13 Identities = 43/97 (44%), Positives = 58/97 (59%) Frame = +1
Query: 172 AQSDHERALALIQDLTSIADTVQDAILSQILAQNSDTEYLRHILGQAGLPFIESPHVQPD 351 A+ L I+D+TS D VQ+ +L +ILA+N+DTEYL G AG Sbjct: 29 AKGTDAEKLQFIEDMTSNVDAVQERVLGEILARNADTEYLAGRCGLAGA-------TDRA 81
Query: 352 TFKRIAPLTCYEDIFPYIQHIADGDKSPILTNLPVTE 462 TF+ P+ YED+ PYI+ IADGD+SPIL+ PV+E Sbjct: 82 TFRAKVPMATYEDLQPYIRRIADGDRSPILSGHPVSE 118
>tr|Q0GUM1|Q0GUM1_ARATH Auxin-responsive GH3-like OS=Arabidopsis thaliana GN=MAS1 PE=2 SV=1 Length = 612
Score = 75.5 bits (184), Expect = 3e-12 Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 1/94 (1%) Frame = +1
Query: 184 HERALALIQDLTSIADTVQDAILSQILAQNSDTEYLR-HILGQAGLPFIESPHVQPDTFK 360 +++ L LI++LTS AD VQ +L +IL +N+D EYLR H L + +TFK Sbjct: 21 NKQKLQLIEELTSNADQVQRQVLEEILTRNADVEYLRRHDL---------NGRTDRETFK 71
Query: 361 RIAPLTCYEDIFPYIQHIADGDKSPILTNLPVTE 462 I P+ YEDI P I IA+GDKSPIL++ P++E Sbjct: 72 NIMPVITYEDIEPEINRIANGDKSPILSSKPISE 105
>tr|A7PXP4|A7PXP4_VITVI Chromosome chr12 scaffold_36, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026120001 PE=4 SV=1 Length = 588
Score = 73.9 bits (180), Expect = 9e-12 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 1/92 (1%) Frame = +1
Query: 190 RALALIQDLTSIADTVQDAILSQILAQNSDTEYL-RHILGQAGLPFIESPHVQPDTFKRI 366 RAL I+D+T A VQ +LS+I+ +NS+ EYL RH L + V DTFK+I Sbjct: 27 RALEFIEDVTMNAKEVQMQVLSEIITRNSNVEYLQRHGL---------NGRVDADTFKKI 77
Query: 367 APLTCYEDIFPYIQHIADGDKSPILTNLPVTE 462 P+ YED+ P I+ IA+GD SPIL + P++E Sbjct: 78 VPVVTYEDMLPDIERIANGDMSPILCSKPISE 109
>tr|A7P139|A7P139_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027472001 PE=4 SV=1 Length = 605
Score = 73.6 bits (179), Expect = 1e-11 Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 1/111 (0%) Frame = +1
Query: 133 KLNGKATISHNIMAQSDHERALALIQDLTSIADTVQDAILSQILAQNSDTEYL-RHILGQ 309 K + KAT H+ +++AL I+D+T+ AD VQ +L++IL +N+ EYL RH LG Sbjct: 6 KKSFKAT-GHDYCLAEKNKKALQFIEDVTTNADQVQKRVLAEILTRNAHVEYLHRHGLGG 64
Query: 310 AGLPFIESPHVQPDTFKRIAPLTCYEDIFPYIQHIADGDKSPILTNLPVTE 462 H DTFK++ P+ YED+ P I IA+GD S IL + P++E Sbjct: 65 ---------HTDRDTFKKLMPVITYEDLQPDITRIANGDTSLILCSNPISE 106
>tr|A5BXN9|A5BXN9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013365 PE=4 SV=1 Length = 613
Score = 73.6 bits (179), Expect = 1e-11 Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 1/111 (0%) Frame = +1
Query: 133 KLNGKATISHNIMAQSDHERALALIQDLTSIADTVQDAILSQILAQNSDTEYL-RHILGQ 309 K + KAT H+ +++AL I+D+T+ AD VQ +L++IL +N+ EYL RH LG Sbjct: 6 KKSFKAT-GHDYCLAEKNKKALQFIEDVTTNADQVQKRVLAEILTRNAHVEYLHRHGLGG 64
Query: 310 AGLPFIESPHVQPDTFKRIAPLTCYEDIFPYIQHIADGDKSPILTNLPVTE 462 H DTFK++ P+ YED+ P I IA+GD S IL + P++E Sbjct: 65 ---------HTDRDTFKKLMPVITYEDLQPDITRIANGDTSLILCSNPISE 106
>tr|A7PLK7|A7PLK7_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019610001 PE=4 SV=1 Length = 600
Score = 72.8 bits (177), Expect = 2e-11 Identities = 39/91 (42%), Positives = 58/91 (63%) Frame = +1
Query: 190 RALALIQDLTSIADTVQDAILSQILAQNSDTEYLRHILGQAGLPFIESPHVQPDTFKRIA 369 +AL I+++T D VQ+ IL++IL+QN +TEYL+ F + DTFK Sbjct: 21 KALQFIEEMTRNPDQVQEKILAEILSQNGETEYLQR--------FKLAGATDRDTFKSKV 72
Query: 370 PLTCYEDIFPYIQHIADGDKSPILTNLPVTE 462 P+ YED+ P IQ IA+GD+SPIL++ P++E Sbjct: 73 PVVTYEDLQPDIQRIANGDRSPILSSHPISE 103
>tr|A5C238|A5C238_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042944 PE=4 SV=1 Length = 607
Score = 72.8 bits (177), Expect = 2e-11 Identities = 39/91 (42%), Positives = 58/91 (63%) Frame = +1
Query: 190 RALALIQDLTSIADTVQDAILSQILAQNSDTEYLRHILGQAGLPFIESPHVQPDTFKRIA 369 +AL I+++T D VQ+ IL++IL+QN +TEYL+ F + DTFK Sbjct: 21 KALQFIEEMTRNPDQVQEKILAEILSQNGETEYLQR--------FKLAGATDRDTFKSKV 72
Query: 370 PLTCYEDIFPYIQHIADGDKSPILTNLPVTE 462 P+ YED+ P IQ IA+GD+SPIL++ P++E Sbjct: 73 PVVTYEDLQPDIQRIANGDRSPILSSHPISE 103
>tr|A3BLG6|A3BLG6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_023888 PE=4 SV=1 Length = 603
Score = 72.4 bits (176), Expect = 3e-11 Identities = 40/98 (40%), Positives = 60/98 (61%) Frame = +1
Query: 169 MAQSDHERALALIQDLTSIADTVQDAILSQILAQNSDTEYLRHILGQAGLPFIESPHVQP 348 ++++D E+ L LI++LTS D VQ+ +LS+IL +N+ EYL AG Sbjct: 22 VSEADVEK-LRLIEELTSDVDAVQERVLSEILGRNAGAEYLTRCGHDAG-------DTGR 73
Query: 349 DTFKRIAPLTCYEDIFPYIQHIADGDKSPILTNLPVTE 462 TF+ P+ Y+D+ PYIQ +ADGD SP+L+ P+TE Sbjct: 74 ATFRAKVPVVSYDDLKPYIQRVADGDCSPVLSTHPITE 111
>tr|B6U4E2|B6U4E2_MAIZE Indole-3-acetic acid-amido synthetase GH3.8 OS=Zea mays PE=2 SV=1 Length = 614
Score = 71.6 bits (174), Expect = 4e-11 Identities = 39/89 (43%), Positives = 56/89 (62%) Frame = +1
Query: 196 LALIQDLTSIADTVQDAILSQILAQNSDTEYLRHILGQAGLPFIESPHVQPDTFKRIAPL 375 L I+++TS D VQ+ +L +ILA+N+ TEYL + GL + TF+ P+ Sbjct: 35 LQFIEEMTSNVDAVQERVLGEILARNAGTEYL----AKYGLAAATTDRA---TFRAKVPM 87
Query: 376 TCYEDIFPYIQHIADGDKSPILTNLPVTE 462 YED+ PYI+ IADGD+SPIL+ PV+E Sbjct: 88 ATYEDLQPYIRRIADGDRSPILSGHPVSE 116
>tr|B6EBQ1|B6EBQ1_MAIZE Indole-3-acetic acid amido synthetase OS=Zea mays GN=GH3 PE=4 SV=1 Length = 614
Score = 71.6 bits (174), Expect = 4e-11 Identities = 39/89 (43%), Positives = 56/89 (62%) Frame = +1
Query: 196 LALIQDLTSIADTVQDAILSQILAQNSDTEYLRHILGQAGLPFIESPHVQPDTFKRIAPL 375 L I+++TS D VQ+ +L +ILA+N+ TEYL + GL + TF+ P+ Sbjct: 35 LQFIEEMTSNVDAVQERVLGEILARNAGTEYL----AKYGLAAATTDRA---TFRAKVPM 87
Query: 376 TCYEDIFPYIQHIADGDKSPILTNLPVTE 462 YED+ PYI+ IADGD+SPIL+ PV+E Sbjct: 88 ATYEDLQPYIRRIADGDRSPILSGHPVSE 116
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