DK962608 |
Clone id |
TST39A01NGRL0014_F06 |
Library |
TST39 |
Length |
694 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_F06. 5' end sequence. |
Accession |
DK962608 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
ATGGCAGGGACACAGGTCCCGTGGCTAACTCACAGCGCACCTTGTCTCCCTCAGCTACTC AGCAGAGCTCGCGTTTGTATCTCTACAGGCTCTTTTGCCCGATTTCCTCTCGTTCGGTTC GATTTACTCCCTGGAAGCAGCTTCGGAATAAACAGAAGTCGTAAAGATTCTTCTCTCTTA TTCTCTCTCTGCATCAAAGCGTACTCACAAACCAGCAATGGAGCTCCAGAACAGAGCCCA AACTTGCAGAAGCAGAAGCCGTCGGATGTACGAGTACGCTTTGCTCCTTCTCCAACTGGA AACCTTCATGTTGGTGGTGCTCGAACTGCCCTTTTCAACTTCCTTTTTGCAAGATCTCAA GGAGGAAAATTCATCCTTCGGATTGAGGACACTGATTTAGAGAGGTCAACTCGTGAATCA GAAGAAGCTGTGTTGCGCGACCTTACATGGCTTGGGCTGGAGTGGGATGAAGGTCCAAAC AAGGATGGGGGTGTGGGTCCCTACCGGCAGTCAGAGAGGACTAGCCTTTATCTGAAGTAT GCAGAGCAATTAGTGGAATCAGGTCATGCATACAAGTGCTTTTGCACTGATGAGGAGCTT GAAGCCATGCGTGAGGAAGCCAAAGCCAAGAACCTGCCCCCAAAGTATAGTGGCAAGTGG GCAAAAGCCAACAAGGATGAAGTTGAGGCTGAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FEA2 |
Definition |
sp|Q9FEA2|SYE_ARATH Glutamyl-tRNA synthetase OS=Arabidopsis thaliana |
Align length |
142 |
Score (bit) |
228.0 |
E-value |
3.0e-59 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SYW3 |
Definition |
tr|A9SYW3|A9SYW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
146 |
Score (bit) |
244.0 |
E-value |
4.0e-63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962608|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_F06, 5' (694 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SYW3|A9SYW3_PHYPA Predicted protein OS=Physcomitrella paten... 244 4e-63 tr|B8LPV9|B8LPV9_PICSI Putative uncharacterized protein OS=Picea... 233 9e-60 tr|Q52JJ5|Q52JJ5_NICBE Glutamyl-tRNA synthetase OS=Nicotiana ben... 231 4e-59 tr|A7P8T4|A7P8T4_VITVI Chromosome chr3 scaffold_8, whole genome ... 231 4e-59 tr|Q2XPV5|Q2XPV5_SOLTU Glutamate--tRNA ligase-like protein OS=So... 226 8e-58 tr|A5BCF0|A5BCF0_VITVI Putative uncharacterized protein OS=Vitis... 226 8e-58 tr|B8AGK7|B8AGK7_ORYSI Putative uncharacterized protein OS=Oryza... 219 2e-55 tr|Q6YUS0|Q6YUS0_ORYSJ Os02g0121000 protein OS=Oryza sativa subs... 218 2e-55 tr|A3A2J7|A3A2J7_ORYSJ Putative uncharacterized protein OS=Oryza... 218 2e-55 tr|A8I629|A8I629_CHLRE Non-discriminatory gln-glu-trna synthetas... 218 4e-55 tr|A4RZ66|A4RZ66_OSTLU Predicted protein OS=Ostreococcus lucimar... 213 1e-53 tr|B4AN53|B4AN53_BACPU Glutamyl-tRNA synthetase OS=Bacillus pumi... 185 3e-45 tr|A4XHE0|A4XHE0_CALS8 Glutamate--tRNA(Gln) ligase / glutamyl-tR... 182 2e-44 tr|B4BT25|B4BT25_9BACI Glutamyl-tRNA synthetase OS=Geobacillus s... 181 3e-44 tr|Q2B1J1|Q2B1J1_9BACI Glutamyl-tRNA synthetase OS=Bacillus sp. ... 181 5e-44 tr|A4XLH2|A4XLH2_CALS8 Glutamyl-tRNA synthetase, class Ic OS=Cal... 180 7e-44 tr|B0K5F4|B0K5F4_THEPX Glutamyl-tRNA synthetase OS=Thermoanaerob... 180 9e-44 tr|B2V5J1|B2V5J1_SULSY Glutamyl-tRNA synthetase OS=Sulfurihydrog... 179 1e-43 tr|B2A4B3|B2A4B3_NATTJ Glutamate--tRNA(Gln) ligase, glutamyl-tRN... 178 3e-43 tr|B0KCH7|B0KCH7_THEP3 Glutamyl-tRNA synthetase OS=Thermoanaerob... 178 3e-43 tr|B6Y0A2|B6Y0A2_ANATH Glutamyl-tRNA synthetase OS=Anaerocellum ... 178 3e-43 tr|B7GJ44|B7GJ44_9BACI Glutamyl-tRNA synthetase OS=Anoxybacillus... 177 4e-43 tr|B7YDR0|B7YDR0_9BACI Glutamyl-tRNA synthetase OS=Geobacillus s... 177 6e-43 tr|B6XZ19|B6XZ19_ANATH Glutamyl-tRNA synthetase OS=Anaerocellum ... 177 7e-43 tr|A0XYU1|A0XYU1_9GAMM Glutamyl-tRNA synthetase OS=Alteromonadal... 177 7e-43 tr|Q0AYF8|Q0AYF8_SYNWW Glutamyl-tRNA synthetase OS=Syntrophomona... 176 1e-42 tr|B2KAV3|B2KAV3_ELUMP Glutamyl-tRNA synthetase OS=Elusimicrobiu... 176 1e-42 tr|Q01G26|Q01G26_OSTTA Putative glutamate-tRNA ligase (ISS) OS=O... 174 4e-42 tr|A5D5L8|A5D5L8_PELTS Glutamyl-and glutaminyl-tRNA synthetases ... 174 5e-42 tr|B7IFB8|B7IFB8_9THEM Glutamyl-tRNA synthetase OS=Thermosipho a... 174 5e-42
>tr|A9SYW3|A9SYW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_137714 PE=3 SV=1 Length = 586
Score = 244 bits (623), Expect = 4e-63 Identities = 111/146 (76%), Positives = 132/146 (90%) Frame = +1
Query: 256 KPSDVRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDTDLERSTRESEEAVL 435 K S+VRVRFAPSPTGNLHVGGARTALFN+L+A+S GGKFILRIEDTDLERST+ESEEAV+ Sbjct: 63 KGSEVRVRFAPSPTGNLHVGGARTALFNYLYAKSLGGKFILRIEDTDLERSTKESEEAVI 122
Query: 436 RDLTWLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAMRE 615 RDL WLGLEWDEGP+K+G GPYRQSERT +Y Y E+L+++GH Y+CFCTDEELEAMRE Sbjct: 123 RDLQWLGLEWDEGPDKEGECGPYRQSERTHIYQAYVEKLLKTGHVYRCFCTDEELEAMRE 182
Query: 616 EAKAKNLPPKYSGKWAKANKDEVEAE 693 EAK+KN+PP+Y GKW A++ E++AE Sbjct: 183 EAKSKNMPPRYMGKWGSASQAEIDAE 208
>tr|B8LPV9|B8LPV9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 581
Score = 233 bits (594), Expect = 9e-60 Identities = 110/160 (68%), Positives = 131/160 (81%) Frame = +1
Query: 214 SNGAPEQSPNLQKQKPSDVRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDT 393 +N AP ++ K VRVRFAPSPTGNLHVGGARTALFN+LFARS+GGKFILRIEDT Sbjct: 46 ANKAPGSDDSVAKS--GGVRVRFAPSPTGNLHVGGARTALFNYLFARSRGGKFILRIEDT 103
Query: 394 DLERSTRESEEAVLRDLTWLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAY 573 DLERST+ESEE VLRDL WLGL WDEGP+K G GPYRQSER +LY +YAE+L+ SG+AY Sbjct: 104 DLERSTKESEEVVLRDLAWLGLSWDEGPDKGGSFGPYRQSERNTLYKEYAERLLNSGYAY 163
Query: 574 KCFCTDEELEAMREEAKAKNLPPKYSGKWAKANKDEVEAE 693 +CFC++EEL+ M+EEAK K LPP Y+GKW A +E++ E Sbjct: 164 RCFCSNEELDKMKEEAKLKQLPPVYTGKWVSATDEEIQEE 203
>tr|Q52JJ5|Q52JJ5_NICBE Glutamyl-tRNA synthetase OS=Nicotiana benthamiana GN=GRS PE=2 SV=1 Length = 569
Score = 231 bits (588), Expect = 4e-59 Identities = 115/183 (62%), Positives = 137/183 (74%), Gaps = 5/183 (2%) Frame = +1
Query: 160 RKDSSLLFSLCIK-----AYSQTSNGAPEQSPNLQKQKPSDVRVRFAPSPTGNLHVGGAR 324 R D S SLC + Y+ NG DVRVRFAPSPTGNLHVGGAR Sbjct: 28 RGDHSYWQSLCSRRRSFSVYASAGNGG-------------DVRVRFAPSPTGNLHVGGAR 74
Query: 325 TALFNFLFARSQGGKFILRIEDTDLERSTRESEEAVLRDLTWLGLEWDEGPNKDGGVGPY 504 TALFN+L+AR++GGKFILRIEDTDLERST+ESEEAVLRDL+WLGL WDEGP GG GPY Sbjct: 75 TALFNYLYARAKGGKFILRIEDTDLERSTKESEEAVLRDLSWLGLAWDEGPGIGGGYGPY 134
Query: 505 RQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAMREEAKAKNLPPKYSGKWAKANKDEV 684 RQSER +LY ++AE+L++SGH Y+CFC++EELE M+E AK K LPP Y+G+WA A ++EV Sbjct: 135 RQSERNALYKQFAEKLLQSGHVYRCFCSNEELEKMKEIAKLKQLPPVYTGRWASATEEEV 194
Query: 685 EAE 693 E Sbjct: 195 VEE 197
>tr|A7P8T4|A7P8T4_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036298001 PE=3 SV=1 Length = 566
Score = 231 bits (588), Expect = 4e-59 Identities = 107/148 (72%), Positives = 127/148 (85%) Frame = +1
Query: 250 KQKPSDVRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDTDLERSTRESEEA 429 K+ +VRVRFAPSPTGNLHVGGARTALFN+LFARS+GGKF+LRIEDTDLERST++SEEA Sbjct: 45 KKLEGEVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKQSEEA 104
Query: 430 VLRDLTWLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAM 609 +L+DL+WLGL WDEGP G GPYRQSER SLY +YAE+L+ESGH Y+CFC++EELE M Sbjct: 105 LLQDLSWLGLHWDEGPGVGGDYGPYRQSERNSLYKQYAEKLLESGHVYQCFCSNEELEKM 164
Query: 610 REEAKAKNLPPKYSGKWAKANKDEVEAE 693 +E AK K LPP Y+GKWA A +EV+ E Sbjct: 165 KEIAKLKQLPPVYTGKWASATAEEVQEE 192
>tr|Q2XPV5|Q2XPV5_SOLTU Glutamate--tRNA ligase-like protein OS=Solanum tuberosum PE=2 SV=1 Length = 343
Score = 226 bits (577), Expect = 8e-58 Identities = 105/142 (73%), Positives = 123/142 (86%) Frame = +1
Query: 268 VRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDTDLERSTRESEEAVLRDLT 447 VRVRFAPSPTGNLHVGGARTALFN+L+ARS+GGKF+LRIEDTDLERSTRESEEAVLRDL+ Sbjct: 57 VRVRFAPSPTGNLHVGGARTALFNYLYARSKGGKFVLRIEDTDLERSTRESEEAVLRDLS 116
Query: 448 WLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAMREEAKA 627 WLGL WDEGP G GPYRQSER +LY ++AE+L++SGH Y+CFC++EELE M+E AK Sbjct: 117 WLGLAWDEGPGVGGNYGPYRQSERNALYKEFAEKLLQSGHVYRCFCSNEELEKMKEMAKL 176
Query: 628 KNLPPKYSGKWAKANKDEVEAE 693 K LPP Y+G+WA A + EV E Sbjct: 177 KQLPPVYTGRWASATEQEVLEE 198
>tr|A5BCF0|A5BCF0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039082 PE=3 SV=1 Length = 555
Score = 226 bits (577), Expect = 8e-58 Identities = 105/148 (70%), Positives = 126/148 (85%) Frame = +1
Query: 250 KQKPSDVRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDTDLERSTRESEEA 429 K+ +VRVRFAPSPTGNLHVGGARTALFN+LFARS+GGKF+LRIEDTDLERST++SEEA Sbjct: 45 KKLEGEVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKQSEEA 104
Query: 430 VLRDLTWLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAM 609 +L+DL+WLGL WDEGP G GPYRQSER SLY ++AE+L+ESGH Y+CFC++EELE M Sbjct: 105 LLQDLSWLGLHWDEGPGVGGDYGPYRQSERNSLYKQHAEKLLESGHVYQCFCSNEELEKM 164
Query: 610 REEAKAKNLPPKYSGKWAKANKDEVEAE 693 +E AK LPP Y+GKWA A +EV+ E Sbjct: 165 KEIAKLXQLPPVYTGKWASATAEEVQEE 192
>tr|B8AGK7|B8AGK7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05632 PE=4 SV=1 Length = 547
Score = 219 bits (557), Expect = 2e-55 Identities = 102/142 (71%), Positives = 119/142 (83%) Frame = +1
Query: 268 VRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDTDLERSTRESEEAVLRDLT 447 VRVRFAPSPTGNLHVGGARTALFN+LFARS+GGKF+LRIEDTDLERST++SEEAVL DL Sbjct: 46 VRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKKSEEAVLSDLA 105
Query: 448 WLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAMREEAKA 627 WLGL+WDEGP+ G GPYRQSER S+Y +YAE+L+ESG Y+CFC+ EELE M+E AK Sbjct: 106 WLGLDWDEGPDVGGEFGPYRQSERNSMYKQYAEKLMESGAVYRCFCSSEELEQMKETAKQ 165
Query: 628 KNLPPKYSGKWAKANKDEVEAE 693 LPP Y GKW A+ E++ E Sbjct: 166 MQLPPVYMGKWGTASDAEIQQE 187
>tr|Q6YUS0|Q6YUS0_ORYSJ Os02g0121000 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0088N06.19 PE=2 SV=1 Length = 567
Score = 218 bits (556), Expect = 2e-55 Identities = 102/142 (71%), Positives = 119/142 (83%) Frame = +1
Query: 268 VRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDTDLERSTRESEEAVLRDLT 447 VRVRFAPSPTGNLHVGGARTALFN+LFARS+GGKF+LRIEDTDLERST++SEEAVL DL Sbjct: 51 VRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKKSEEAVLSDLA 110
Query: 448 WLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAMREEAKA 627 WLGL+WDEGP+ G GPYRQSER S+Y +YAE+L+ESG Y+CFC+ EELE M+E AK Sbjct: 111 WLGLDWDEGPDVGGEFGPYRQSERNSMYKQYAEKLMESGAVYQCFCSSEELEQMKETAKQ 170
Query: 628 KNLPPKYSGKWAKANKDEVEAE 693 LPP Y GKW A+ E++ E Sbjct: 171 MQLPPVYMGKWGTASDAEIQQE 192
>tr|A3A2J7|A3A2J7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005019 PE=3 SV=1 Length = 571
Score = 218 bits (556), Expect = 2e-55 Identities = 102/142 (71%), Positives = 119/142 (83%) Frame = +1
Query: 268 VRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDTDLERSTRESEEAVLRDLT 447 VRVRFAPSPTGNLHVGGARTALFN+LFARS+GGKF+LRIEDTDLERST++SEEAVL DL Sbjct: 46 VRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKKSEEAVLSDLA 105
Query: 448 WLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAMREEAKA 627 WLGL+WDEGP+ G GPYRQSER S+Y +YAE+L+ESG Y+CFC+ EELE M+E AK Sbjct: 106 WLGLDWDEGPDVGGEFGPYRQSERNSMYKQYAEKLMESGAVYQCFCSSEELEQMKETAKQ 165
Query: 628 KNLPPKYSGKWAKANKDEVEAE 693 LPP Y GKW A+ E++ E Sbjct: 166 MQLPPVYMGKWGTASDAEIQQE 187
>tr|A8I629|A8I629_CHLRE Non-discriminatory gln-glu-trna synthetase OS=Chlamydomonas reinhardtii GN=GTS2 PE=3 SV=1 Length = 538
Score = 218 bits (554), Expect = 4e-55 Identities = 103/145 (71%), Positives = 120/145 (82%) Frame = +1
Query: 256 KPSDVRVRFAPSPTGNLHVGGARTALFNFLFARSQGGKFILRIEDTDLERSTRESEEAVL 435 K S VRVRFAPSPTGNLHVGGARTALFN+L+AR GGKFILR+EDTD RSTR SEEA++ Sbjct: 33 KGSQVRVRFAPSPTGNLHVGGARTALFNWLYARKMGGKFILRVEDTDTARSTRASEEAMV 92
Query: 436 RDLTWLGLEWDEGPNKDGGVGPYRQSERTSLYLKYAEQLVESGHAYKCFCTDEELEAMRE 615 RDL WLGL+WDEGP+ G GPYRQSERT++Y + A++LV G AY CFCTDEELEAM++ Sbjct: 93 RDLKWLGLDWDEGPDVGGAHGPYRQSERTAIYKEMADKLVAEGKAYPCFCTDEELEAMKK 152
Query: 616 EAKAKNLPPKYSGKWAKANKDEVEA 690 +A+ K LPP Y GKWA+A EVEA Sbjct: 153 DAEEKKLPPIYRGKWARATAAEVEA 177
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