DK962562 |
Clone id |
TST39A01NGRL0014_D08 |
Library |
TST39 |
Length |
548 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_D08. 5' end sequence. |
Accession |
DK962562 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3058Contig1 |
Sequence |
GGAGCGTACTCATCGTAGGAGCGTTTCCATGGCCATTTCCTCCTGTCTCTTCACTGGTTT ACCGTGCCCAAGGAATGTTGCAGTGAGCTTTCAATCGTTGAAACAAATCAAGGGCAATAT TCAGTTTTCATATATACCAGGCTGCCATAGTGCTATTGGAACTGTTGCTATAAGGTGCGG CCATTCTTCGGTGTTCAGTTCCTCAATGAAGGCATACTTGCCTGGTCAATCAGCTGGGTC AGCAAAAAGGGGTTTCCTGGTATTTGCTACTGCTGATGCTAATAAAGGGCAATCTGAGGA TCTCCATGAAGTTGAAGACAAATCACTTAAGAAGTATACTTGGGCAGACCCTAAGAAGCC AAGAATCTGTATATTGGGAGGGGGCTTTGGTGGACTTTATACAGCTTTGCGTCTTGAATC TCTCGTGTGGCCTGCAGACAAGAAGCCAGAGGTTCTTGTTGTTGACCAATCAGACAGATT TGTGTTTAAGCCATTGTTGTATGAGCTTCTTTCTAAAGAGGTTGATGTATGGGAAGTAGC TCCTTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8GXR9 |
Definition |
sp|Q8GXR9|DHNA_ARATH Probable NADH dehydrogenase, chloroplastic/mitochondrial OS=Arabidopsis thaliana |
Align length |
72 |
Score (bit) |
130.0 |
E-value |
4.0e-30 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q69Y16 |
Definition |
tr|Q69Y16|Q69Y16_ORYSJ Os06g0214900 protein OS=Oryza sativa subsp. japonica |
Align length |
121 |
Score (bit) |
136.0 |
E-value |
6.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962562|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_D08, 5' (548 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q69Y16|Q69Y16_ORYSJ Os06g0214900 protein OS=Oryza sativa subs... 136 6e-31 tr|A3B9M5|A3B9M5_ORYSJ Putative uncharacterized protein OS=Oryza... 135 1e-30 tr|A7PKQ5|A7PKQ5_VITVI Chromosome chr7 scaffold_20, whole genome... 134 3e-30 tr|A5BBF3|A5BBF3_VITVI Putative uncharacterized protein OS=Vitis... 134 3e-30 tr|B8B3Z1|B8B3Z1_ORYSI Putative uncharacterized protein OS=Oryza... 133 5e-30 tr|B6T7Z1|B6T7Z1_MAIZE NADH dehydrogenase OS=Zea mays PE=2 SV=1 130 5e-29 tr|A9SPR1|A9SPR1_PHYPA Predicted protein (Fragment) OS=Physcomit... 121 2e-26 tr|A0ZFZ6|A0ZFZ6_NODSP NADH dehydrogenase OS=Nodularia spumigena... 100 7e-20 tr|B2J0U0|B2J0U0_NOSP7 FAD-dependent pyridine nucleotide-disulph... 98 2e-19 tr|B4VMD0|B4VMD0_9CYAN Pyridine nucleotide-disulphide oxidoreduc... 97 7e-19 tr|Q4CAE0|Q4CAE0_CROWT FAD-dependent pyridine nucleotide-disulph... 94 5e-18 tr|Q3MF02|Q3MF02_ANAVT FAD-dependent pyridine nucleotide-disulph... 94 6e-18 tr|Q10YF1|Q10YF1_TRIEI FAD-dependent pyridine nucleotide-disulph... 94 6e-18 tr|P73735|P73735_SYNY3 NADH dehydrogenase OS=Synechocystis sp. (... 94 6e-18 tr|A3IRI8|A3IRI8_9CHRO FAD-dependent pyridine nucleotide-disulph... 94 6e-18 tr|Q8YPU6|Q8YPU6_ANASP NADH dehydrogenase OS=Anabaena sp. (strai... 92 1e-17 tr|B1WZE0|B1WZE0_CYAA5 Type 2 NADH dehydrogenase OS=Cyanothece (... 92 2e-17 tr|A8YIX5|A8YIX5_MICAE Genome sequencing data, contig C318 OS=Mi... 92 2e-17 tr|A0YND6|A0YND6_9CYAN FAD-dependent pyridine nucleotide-disulph... 92 2e-17 tr|A0YKY9|A0YKY9_9CYAN FAD-dependent pyridine nucleotide-disulph... 92 2e-17 tr|B8HPF6|B8HPF6_9CHRO FAD-dependent pyridine nucleotide-disulph... 91 5e-17 tr|A8ISI7|A8ISI7_CHLRE Type-II NADH dehydrogenase OS=Chlamydomon... 90 7e-17 tr|A6YT86|A6YT86_CHLRE Putative type II NADH dehydrogenase OS=Ch... 90 7e-17 tr|A4RWF1|A4RWF1_OSTLU Predicted protein OS=Ostreococcus lucimar... 90 7e-17 tr|B5W965|B5W965_SPIMA FAD-dependent pyridine nucleotide-disulph... 90 9e-17 tr|B7JXK9|B7JXK9_SYNP8 FAD-dependent pyridine nucleotide-disulph... 89 1e-16 tr|B4BVG8|B4BVG8_9CHRO FAD-dependent pyridine nucleotide-disulph... 89 1e-16 tr|B7KBF3|B7KBF3_9CHRO FAD-dependent pyridine nucleotide-disulph... 89 2e-16 tr|Q8DJT6|Q8DJT6_THEEB Type 2 NADH dehydrogenase OS=Thermosynech... 86 1e-15 tr|A7R7V6|A7R7V6_VITVI Chromosome undetermined scaffold_2053, wh... 85 2e-15
>tr|Q69Y16|Q69Y16_ORYSJ Os06g0214900 protein OS=Oryza sativa subsp. japonica GN=P0537F07.17 PE=4 SV=1 Length = 548
Score = 136 bits (343), Expect = 6e-31 Identities = 65/121 (53%), Positives = 86/121 (71%) Frame = +2
Query: 185 SSVFSSSMKAYLPGQSAGSAKRGFLVFATADANKGQSEDLHEVEDKSLKKYTWADPKKPR 364 +S+ ++S + G R F + A++ + G ++ + Y+W D ++PR Sbjct: 37 NSILNNSWRLGGTPMKFGLPSRLFRLMASSSSGDGGFSRPSSTDEGPMPIYSWPDKQRPR 96
Query: 365 ICILGGGFGGLYTALRLESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVWEVAP 544 +CILGGGFGGLYTALRLESLVWP DKKP+V++VDQSDRFVFKP+LYELLS EVDVWE+AP Sbjct: 97 VCILGGGFGGLYTALRLESLVWPNDKKPQVMLVDQSDRFVFKPMLYELLSGEVDVWEIAP 156
Query: 545 S 547 S Sbjct: 157 S 157
>tr|A3B9M5|A3B9M5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019747 PE=4 SV=1 Length = 813
Score = 135 bits (341), Expect = 1e-30 Identities = 63/104 (60%), Positives = 79/104 (75%) Frame = +2
Query: 236 GSAKRGFLVFATADANKGQSEDLHEVEDKSLKKYTWADPKKPRICILGGGFGGLYTALRL 415 G R F + A++ + G ++ + Y+W D ++PR+CILGGGFGGLYTALRL Sbjct: 4 GLPSRLFRLMASSSSGDGGFSRPSSTDEGPMPIYSWPDKQRPRVCILGGGFGGLYTALRL 63
Query: 416 ESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVWEVAPS 547 ESLVWP DKKP+V++VDQSDRFVFKP+LYELLS EVDVWE+APS Sbjct: 64 ESLVWPNDKKPQVMLVDQSDRFVFKPMLYELLSGEVDVWEIAPS 107
>tr|A7PKQ5|A7PKQ5_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019273001 PE=4 SV=1 Length = 642
Score = 134 bits (337), Expect = 3e-30 Identities = 72/122 (59%), Positives = 86/122 (70%) Frame = +2
Query: 179 GHSSVFSSSMKAYLPGQSAGSAKRGFLVFATADANKGQSEDLHEVEDKSLKKYTWADPKK 358 G S + +M + QS G + F+ N G +E L E E S + YTW D KK Sbjct: 147 GSSRKLAINMSILMNFQSKGFS---FVASGATQWNGGVAE-LVEGEAAS-RPYTWPDKKK 201
Query: 359 PRICILGGGFGGLYTALRLESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVWEV 538 PR+CILGGGFGGLYTALRLESLVWP DKKP+VL+VDQS+RFVFKP+LYELL+ EVD WE+ Sbjct: 202 PRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLVDQSERFVFKPMLYELLTGEVDAWEI 261
Query: 539 AP 544 AP Sbjct: 262 AP 263
>tr|A5BBF3|A5BBF3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003541 PE=4 SV=1 Length = 504
Score = 134 bits (337), Expect = 3e-30 Identities = 72/122 (59%), Positives = 86/122 (70%) Frame = +2
Query: 179 GHSSVFSSSMKAYLPGQSAGSAKRGFLVFATADANKGQSEDLHEVEDKSLKKYTWADPKK 358 G S + +M + QS G + F+ N G +E L E E S + YTW D KK Sbjct: 28 GSSRKLAINMSILMNFQSKGFS---FVASGATQWNGGVAE-LVEGEAAS-RPYTWPDKKK 82
Query: 359 PRICILGGGFGGLYTALRLESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVWEV 538 PR+CILGGGFGGLYTALRLESLVWP DKKP+VL+VDQS+RFVFKP+LYELL+ EVD WE+ Sbjct: 83 PRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLVDQSERFVFKPMLYELLTGEVDAWEI 142
Query: 539 AP 544 AP Sbjct: 143 AP 144
>tr|B8B3Z1|B8B3Z1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22150 PE=4 SV=1 Length = 548
Score = 133 bits (335), Expect = 5e-30 Identities = 62/104 (59%), Positives = 78/104 (75%) Frame = +2
Query: 236 GSAKRGFLVFATADANKGQSEDLHEVEDKSLKKYTWADPKKPRICILGGGFGGLYTALRL 415 G R F + A++ + G ++ + Y+W D ++PR+CILGGGFGGLYTAL L Sbjct: 54 GLPSRLFRLMASSSSGDGGFSRPSSTDEGPMPIYSWPDKQRPRVCILGGGFGGLYTALSL 113
Query: 416 ESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVWEVAPS 547 ESLVWP DKKP+V++VDQSDRFVFKP+LYELLS EVDVWE+APS Sbjct: 114 ESLVWPNDKKPQVMLVDQSDRFVFKPMLYELLSGEVDVWEIAPS 157
>tr|B6T7Z1|B6T7Z1_MAIZE NADH dehydrogenase OS=Zea mays PE=2 SV=1 Length = 546
Score = 130 bits (327), Expect = 5e-29 Identities = 57/71 (80%), Positives = 67/71 (94%) Frame = +2
Query: 335 YTWADPKKPRICILGGGFGGLYTALRLESLVWPADKKPEVLVVDQSDRFVFKPLLYELLS 514 Y+W D ++PR+CILGGGFGGLYTALRLESLVWP DK+P+VL+VDQSD+FVFKP+LYELLS Sbjct: 85 YSWPDKQRPRVCILGGGFGGLYTALRLESLVWPNDKRPQVLLVDQSDKFVFKPMLYELLS 144
Query: 515 KEVDVWEVAPS 547 EVDVWE+APS Sbjct: 145 GEVDVWEIAPS 155
>tr|A9SPR1|A9SPR1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_133264 PE=4 SV=1 Length = 455
Score = 121 bits (304), Expect = 2e-26 Identities = 54/65 (83%), Positives = 62/65 (95%) Frame = +2
Query: 353 KKPRICILGGGFGGLYTALRLESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVW 532 ++PRICILGGGFGGLYTALRLESL+WP DKKP++++VDQSDRFVFKPLLYEL+SKE D W Sbjct: 1 QRPRICILGGGFGGLYTALRLESLIWPPDKKPQIVLVDQSDRFVFKPLLYELVSKEADEW 60
Query: 533 EVAPS 547 EVAPS Sbjct: 61 EVAPS 65
>tr|A0ZFZ6|A0ZFZ6_NODSP NADH dehydrogenase OS=Nodularia spumigena CCY 9414 GN=N9414_12061 PE=4 SV=1 Length = 396
Score = 100 bits (248), Expect = 7e-20 Identities = 44/62 (70%), Positives = 52/62 (83%) Frame = +2
Query: 359 PRICILGGGFGGLYTALRLESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVWEV 538 PRICILGGGFGGLYTALRL L W +KPE+++VDQSDRF+F PLLYELL+ E+ WE+ Sbjct: 6 PRICILGGGFGGLYTALRLSQLPWENGEKPEIVLVDQSDRFIFAPLLYELLTGELQTWEI 65
Query: 539 AP 544 AP Sbjct: 66 AP 67
>tr|B2J0U0|B2J0U0_NOSP7 FAD-dependent pyridine nucleotide-disulphide oxidoreductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_R1623 PE=4 SV=1 Length = 397
Score = 98.2 bits (243), Expect = 2e-19 Identities = 43/61 (70%), Positives = 52/61 (85%) Frame = +2
Query: 362 RICILGGGFGGLYTALRLESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVWEVA 541 RICILGGGFGGLYTALRL L W + +KPE+++VDQSDRF+F PLLYELL+ E+ WE+A Sbjct: 7 RICILGGGFGGLYTALRLSQLPWESTQKPEIVLVDQSDRFLFSPLLYELLTGELQTWEIA 66
Query: 542 P 544 P Sbjct: 67 P 67
>tr|B4VMD0|B4VMD0_9CYAN Pyridine nucleotide-disulphide oxidoreductase, putative OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_1675 PE=4 SV=1 Length = 400
Score = 96.7 bits (239), Expect = 7e-19 Identities = 42/61 (68%), Positives = 51/61 (83%) Frame = +2
Query: 362 RICILGGGFGGLYTALRLESLVWPADKKPEVLVVDQSDRFVFKPLLYELLSKEVDVWEVA 541 R+CILGGGFGGLYTALRL L W ++PE+++VDQSDRFVF PLLYELL+ E+ WE+A Sbjct: 7 RLCILGGGFGGLYTALRLSQLPWEKSQQPEIILVDQSDRFVFMPLLYELLTGELQTWEIA 66
Query: 542 P 544 P Sbjct: 67 P 67
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