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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962549
Clone id TST39A01NGRL0014_C19
Library
Length 267
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_C19. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GTCGACGTATAGGGTGTGACTCCTGCCCGGTGCTGGAAGATTAAATGATGGGGTGCAAGC
TCTTGACTGAAGTCCCAGTAAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAAT
TCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGAGTAATGATGGCCACACTGTCTCCTC
CAGAGACTCAGCGAAGTTGAAATGTTTGTGATGATGCAATCTCCCCGCGGAAAGACGGAA
AGAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q3BAI2
Definition sp|Q3BAI2|YCX91_PHAAO Uncharacterized protein ORF91 OS=Phalaenopsis aphrodite subsp. formosana
Align length 58
Score (bit) 69.3
E-value 6.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962549|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_C19, 5'
         (238 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3BAI2|YCX91_PHAAO Uncharacterized protein ORF91 OS=Phalaenop...    69   6e-12

>sp|Q3BAI2|YCX91_PHAAO Uncharacterized protein ORF91 OS=Phalaenopsis
           aphrodite subsp. formosana PE=4 SV=1
          Length = 91

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 35/58 (60%), Positives = 42/58 (72%)
 Frame = -3

Query: 215 IITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQELAPHHL 42
           I T++S S SL  RQC   Y+ RAGRNLPDKEFRYLRTV+VTAAV+  F + L  H +
Sbjct: 6   IFTDMSISPSLSPRQCPDRYAFRAGRNLPDKEFRYLRTVLVTAAVHRGFGRRLPCHQV 63
tr_hit_id B2PU91
Definition tr|B2PU91|B2PU91_PROST Putative uncharacterized protein OS=Providencia stuartii ATCC 25827
Align length 60
Score (bit) 94.0
E-value 3.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962549|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0014_C19, 5'
         (238 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2PU91|B2PU91_PROST Putative uncharacterized protein OS=Provi...    94   3e-18
tr|A7VSA7|A7VSA7_9CLOT Putative uncharacterized protein OS=Clost...    93   7e-18
tr|B7R8W3|B7R8W3_9THEO Putative uncharacterized protein OS=Carbo...    91   3e-17
tr|Q1R3T7|Q1R3T7_ECOUT Putative uncharacterized protein OS=Esche...    89   1e-16
tr|A1AII0|A1AII0_ECOK1 Putative uncharacterized protein OS=Esche...    89   1e-16
tr|A1A7P6|A1A7P6_ECOK1 Putative uncharacterized protein OS=Esche...    89   1e-16
tr|Q1R656|Q1R656_ECOUT Putative uncharacterized protein OS=Esche...    88   2e-16
tr|B0PD28|B0PD28_9FIRM Putative uncharacterized protein OS=Anaer...    88   2e-16
tr|B0P655|B0P655_9FIRM Putative uncharacterized protein OS=Anaer...    88   2e-16
tr|A8SBJ8|A8SBJ8_9FIRM Putative uncharacterized protein OS=Faeca...    87   3e-16
tr|A8S7Q9|A8S7Q9_9FIRM Putative uncharacterized protein OS=Faeca...    87   3e-16
tr|A8S6F2|A8S6F2_9FIRM Putative uncharacterized protein OS=Faeca...    87   3e-16
tr|Q1MP75|Q1MP75_LAWIP Putative uncharacterized protein LI1148 O...    84   5e-15
tr|B0MI53|B0MI53_9FIRM Putative uncharacterized protein OS=Anaer...    78   2e-13
tr|B0MGJ9|B0MGJ9_9FIRM Putative uncharacterized protein OS=Anaer...    78   2e-13
tr|A0Q208|A0Q208_CLONN Putative uncharacterized protein OS=Clost...    77   4e-13
tr|A0PXN7|A0PXN7_CLONN Putative uncharacterized protein OS=Clost...    77   4e-13
tr|B1BED5|B1BED5_CLOBO Putative uncharacterized protein OS=Clost...    77   4e-13
tr|B1BEC2|B1BEC2_CLOBO Putative uncharacterized protein OS=Clost...    77   4e-13
tr|B1BE06|B1BE06_CLOBO Putative uncharacterized protein OS=Clost...    77   4e-13
tr|B5CLP6|B5CLP6_9FIRM Putative uncharacterized protein OS=Rumin...    76   7e-13
tr|B1RTR7|B1RTR7_CLOPE Putative uncharacterized protein OS=Clost...    76   7e-13
tr|B1RTP7|B1RTP7_CLOPE Putative uncharacterized protein (Fragmen...    76   7e-13
tr|B1RKU9|B1RKU9_CLOPE Putative uncharacterized protein OS=Clost...    76   7e-13
tr|B1RCB4|B1RCB4_CLOPE Putative uncharacterized protein OS=Clost...    76   7e-13
tr|B1BTI8|B1BTI8_CLOPE Putative uncharacterized protein OS=Clost...    76   7e-13
tr|B1BLN6|B1BLN6_CLOPE Putative uncharacterized protein OS=Clost...    76   7e-13
tr|B1BEX7|B1BEX7_CLOPE Putative uncharacterized protein OS=Clost...    76   7e-13
tr|A7B6K2|A7B6K2_RUMGN Putative uncharacterized protein OS=Rumin...    76   7e-13
tr|A7B5W5|A7B5W5_RUMGN Putative uncharacterized protein OS=Rumin...    76   7e-13

>tr|B2PU91|B2PU91_PROST Putative uncharacterized protein
           OS=Providencia stuartii ATCC 25827 GN=PROSTU_00109 PE=4
           SV=1
          Length = 189

 Score = 94.0 bits (232), Expect = 3e-18
 Identities = 47/60 (78%), Positives = 48/60 (80%)
 Frame = -3

Query: 236 VFPRGDCIITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQEL 57
           V PR  CI T  S SLSL  RQ GHHY+IRAGRNLPDKEFRYLRTVIVTAAVYW F QEL
Sbjct: 122 VLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYWGFDQEL 181


>tr|A7VSA7|A7VSA7_9CLOT Putative uncharacterized protein
           OS=Clostridium leptum DSM 753 GN=CLOLEP_01448 PE=4 SV=1
          Length = 139

 Score = 92.8 bits (229), Expect = 7e-18
 Identities = 45/58 (77%), Positives = 48/58 (82%)
 Frame = -3

Query: 176 RQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQELAPHHLIFQHRAGVTPYTS 3
           RQC   Y+IRAGRNLPDKEFRYLRTVIVTAAVYW F+  LA   L FQHRAGV+PYTS
Sbjct: 2   RQCPDRYTIRAGRNLPDKEFRYLRTVIVTAAVYWGFNSMLAHLLLTFQHRAGVSPYTS 59


>tr|B7R8W3|B7R8W3_9THEO Putative uncharacterized protein
           OS=Carboxydibrachium pacificum DSM 12653 GN=CDSM653_949
           PE=4 SV=1
          Length = 155

 Score = 90.9 bits (224), Expect = 3e-17
 Identities = 46/71 (64%), Positives = 51/71 (71%)
 Frame = -3

Query: 215 IITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQELAPHHLIF 36
           I T+ +TS     RQ    Y+ RAGRNLPDKEFRYLRTVIVTAAV+W F  E  P  L F
Sbjct: 20  IFTSTTTSPGPSSRQRPSRYAFRAGRNLPDKEFRYLRTVIVTAAVHWGFGSEPTPFPLTF 79

Query: 35  QHRAGVTPYTS 3
           QHRAGV+PYTS
Sbjct: 80  QHRAGVSPYTS 90


>tr|Q1R3T7|Q1R3T7_ECOUT Putative uncharacterized protein
           OS=Escherichia coli (strain UTI89 / UPEC) GN=UTI89_C2919
           PE=4 SV=1
          Length = 80

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 46/60 (76%), Positives = 47/60 (78%)
 Frame = -3

Query: 236 VFPRGDCIITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQEL 57
           V PR  CI T  S SLSL  RQ GHHY+IRAGRNLPDKEFRYLRTVIVTAAVY  F QEL
Sbjct: 13  VLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFDQEL 72


>tr|A1AII0|A1AII0_ECOK1 Putative uncharacterized protein
           OS=Escherichia coli O1:K1 / APEC GN=Ecok1_39760 PE=4
           SV=1
          Length = 217

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 46/60 (76%), Positives = 47/60 (78%)
 Frame = -3

Query: 236 VFPRGDCIITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQEL 57
           V PR  CI T  S SLSL  RQ GHHY+IRAGRNLPDKEFRYLRTVIVTAAVY  F QEL
Sbjct: 150 VLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFDQEL 209


>tr|A1A7P6|A1A7P6_ECOK1 Putative uncharacterized protein
           OS=Escherichia coli O1:K1 / APEC GN=Ecok1_01920 PE=4
           SV=1
          Length = 187

 Score = 88.6 bits (218), Expect = 1e-16
 Identities = 46/60 (76%), Positives = 47/60 (78%)
 Frame = -3

Query: 236 VFPRGDCIITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQEL 57
           V PR  CI T  S SLSL  RQ GHHY+IRAGRNLPDKEFRYLRTVIVTAAVY  F QEL
Sbjct: 125 VLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFDQEL 184


>tr|Q1R656|Q1R656_ECOUT Putative uncharacterized protein
           OS=Escherichia coli (strain UTI89 / UPEC) GN=UTI89_C3718
           PE=4 SV=1
          Length = 80

 Score = 88.2 bits (217), Expect = 2e-16
 Identities = 46/60 (76%), Positives = 47/60 (78%)
 Frame = -3

Query: 236 VFPRGDCIITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQEL 57
           V PR  CI T  S SLSL  RQ GHHY+IRAGRNLPDKEFRYLRTVIVTAAVY  F QEL
Sbjct: 13  VLPRVHCIFTANSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYRGFDQEL 72


>tr|B0PD28|B0PD28_9FIRM Putative uncharacterized protein
           OS=Anaerotruncus colihominis DSM 17241 GN=ANACOL_02699
           PE=4 SV=1
          Length = 170

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 48/78 (61%), Positives = 54/78 (69%)
 Frame = -3

Query: 236 VFPRGDCIITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQEL 57
           V  R   I T  + S     RQC   Y+IRAG+NLPDKEFRYLRTVIVTAAVY  F+ EL
Sbjct: 88  VLSRVTGIFTGTTISPGGLLRQCPDRYTIRAGQNLPDKEFRYLRTVIVTAAVYRGFNSEL 147

Query: 56  APHHLIFQHRAGVTPYTS 3
           +   L F+HRAGVTPYTS
Sbjct: 148 SLLLLTFRHRAGVTPYTS 165


>tr|B0P655|B0P655_9FIRM Putative uncharacterized protein
           OS=Anaerotruncus colihominis DSM 17241 GN=ANACOL_00227
           PE=4 SV=1
          Length = 170

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 48/78 (61%), Positives = 54/78 (69%)
 Frame = -3

Query: 236 VFPRGDCIITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQEL 57
           V  R   I T  + S     RQC   Y+IRAG+NLPDKEFRYLRTVIVTAAVY  F+ EL
Sbjct: 88  VLSRVTGIFTGTTISPGGLLRQCPDRYTIRAGQNLPDKEFRYLRTVIVTAAVYRGFNSEL 147

Query: 56  APHHLIFQHRAGVTPYTS 3
           +   L F+HRAGVTPYTS
Sbjct: 148 SLLLLTFRHRAGVTPYTS 165


>tr|A8SBJ8|A8SBJ8_9FIRM Putative uncharacterized protein
           OS=Faecalibacterium prausnitzii M21/2
           GN=FAEPRAM212_01694 PE=4 SV=1
          Length = 267

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 46/78 (58%), Positives = 52/78 (66%)
 Frame = -3

Query: 236 VFPRGDCIITNISTSLSLWRRQCGHHYSIRAGRNLPDKEFRYLRTVIVTAAVYWDFSQEL 57
           V  R   I T  + S     RQC +HY+  AG+NLPDKEFRYLRTVIVTAAV+W F   L
Sbjct: 88  VLSRVTGIFTGTTISPGGLSRQCPNHYAFHAGQNLPDKEFRYLRTVIVTAAVHWGFDSML 147

Query: 56  APHHLIFQHRAGVTPYTS 3
           A   L FQHRAGV+ YTS
Sbjct: 148 AHLLLTFQHRAGVSSYTS 165