DK962528 |
Clone id |
TST39A01NGRL0014_B22 |
Library |
TST39 |
Length |
678 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0014_B22. 5' end sequence. |
Accession |
DK962528 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL382Contig1 |
Sequence |
ACCAAGGGTTTCGCGAGGGTTTCCGGCCATGGCTGCAGCTGCTGCAGCTCTTTCTGCGCG CCCGTTCTCTCGGAATGATTTTTCTATTTCCGGCAGTGAGATCTGCTGTAGTAGCAGCTC TACCAGCAAGATCCTTGGAGGCCAGCTCGCCATCGGATCTAGAAATTATTCCCCTCTCAA GCTTGGATCCTCTCTCTGCCACAGCTATGGCACCTCCGCTTTGAGACAGAGATTCGTCTC TTCGAAGCCTGGCAGTAGGAACAGGGAGCTGACAATAACGGCGAGTGCTGCTGCTGCCTC TGTTCCTGCGGCCCCTGCTCCTGCCCCTCCTTCCACCCAGCAATGGCAAGGCGCCGACAT GAAATCCTTGCTTATTTCTATAGCTACAGGTGTTGCGATCTGGTTCATTCCTGCTCCCTC GGGAGTTTCAAAGAATGCTTGGCAGCTTCTTTCGATTTTCCTCGCCACTATTGTGGGCAT CATCACCCAACCTCTCCCTCTCGGAGCTGTGGCTCTCATGGGACTTGGTGCTTGCGTGCT AACCAAAACTCTCACATTTGCTGCAGCCTTCTCTTCTTTTGGTGATCCTATCCCTTGGCT CATTGCCCTTGCCTTTTTCTTCGCTCGTGGTTTCATCAAGACAGGTCTCGGTAACCGCAT CGCGTACCAATTTGTGCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q41364 |
Definition |
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea |
Align length |
113 |
Score (bit) |
200.0 |
E-value |
7.0e-51 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962528|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0014_B22, 5' (678 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chlorop... 200 7e-51 sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillu... 125 2e-28 sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia ... 72 3e-12 sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella... 67 1e-10 sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escheric... 67 1e-10 sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escheric... 67 1e-10 sp|Q57048|Y020_HAEIN Uncharacterized transporter HI0020 OS=Haemo... 66 1e-10 sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella... 66 2e-10 sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escheric... 66 2e-10 sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escheric... 65 3e-10 sp|Q8FDG7|TTDT_ECOL6 L-tartrate/succinate antiporter OS=Escheric... 65 3e-10 sp|Q32BQ4|TTDT_SHIDS L-tartrate/succinate antiporter OS=Shigella... 65 4e-10 sp|Q31WX1|TTDT_SHIBS L-tartrate/succinate antiporter OS=Shigella... 64 6e-10 sp|P0AE74|CITT_ECOLI Citrate carrier OS=Escherichia coli (strain... 61 5e-09 sp|P0AE75|CITT_ECO57 Citrate carrier OS=Escherichia coli O157:H7... 61 5e-09 sp|P0AFU2|YFBS_ECOLI Uncharacterized transporter yfbS OS=Escheri... 43 0.001 sp|P0AFU3|YFBS_ECO57 Uncharacterized transporter yfbS OS=Escheri... 43 0.001 sp|Q9GZR3|CFC1_HUMAN Cryptic protein OS=Homo sapiens GN=CFC1 PE=... 38 0.057 sp|Q39593|SAC1_CHLRE Putative sulfur deprivation response regula... 36 0.16 sp|P97766|CFC1_MOUSE Cryptic protein OS=Mus musculus GN=Cfc1 PE=... 36 0.17 sp|P0AA23|EBR_SALTY Putative ethidium bromide resistance protein... 35 0.28 sp|P0AA24|EBR_PSEAE Putative ethidium bromide resistance protein... 35 0.28 sp|P0AA22|EBR_ECOLX Putative ethidium bromide resistance protein... 35 0.28 sp|O67776|Y1964_AQUAE Putative zinc metalloprotease aq_1964 OS=A... 32 2.4 sp|Q5XIB1|TSSC4_RAT Protein TSSC4 OS=Rattus norvegicus GN=Tssc4 ... 32 2.4 sp|Q07252|MEMP_RALEH Membrane protein OS=Ralstonia eutropha (str... 32 3.1 sp|P26686|SRR55_DROME Serine-arginine protein 55 OS=Drosophila m... 31 5.3 sp|Q9P6R9|CWC22_SCHPO Pre-mRNA-splicing factor cwc22 OS=Schizosa... 31 5.3 sp|A1B673|ILVD_PARDP Dihydroxy-acid dehydratase OS=Paracoccus de... 31 6.9 sp|Q1QF31|NHAA_NITHX Na(+)/H(+) antiporter nhaA OS=Nitrobacter h... 30 9.0
>sp|Q41364|SOT1_SPIOL 2-oxoglutarate/malate translocator, chloroplastic OS=Spinacia oleracea GN=SODIT1 PE=1 SV=1 Length = 569
Score = 200 bits (508), Expect = 7e-51 Identities = 98/113 (86%), Positives = 104/113 (92%) Frame = +2
Query: 338 QQWQGADMKSLLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVAL 517 Q WQGA +K LL SI TGV IWFIP P GVS+NAWQLL+IFL+TIVGIITQPLPLGAVAL Sbjct: 97 QPWQGASIKPLLASILTGVIIWFIPTPEGVSRNAWQLLAIFLSTIVGIITQPLPLGAVAL 156
Query: 518 MGLGACVLTKTLTFAAAFSSFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFV 676 MGLGA VLTKTLTF+AAFS+FGDPIPWLIALAFFFARGFIKTGLGNRIAYQFV Sbjct: 157 MGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFV 209
>sp|O34726|YFLS_BACSU Putative malate transporter yflS OS=Bacillus subtilis GN=yflS PE=2 SV=1 Length = 478
Score = 125 bits (314), Expect = 2e-28 Identities = 58/103 (56%), Positives = 75/103 (72%) Frame = +2
Query: 368 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLTK 547 LLI++A G+ IWFIPAPSG+ AW L +IF+ATI+G I++PLP+GA+A+ L LT Sbjct: 18 LLITVAVGLIIWFIPAPSGLEPKAWHLFAIFVATIIGFISKPLPMGAIAIFALAVTALTG 77
Query: 548 TLTFAAAFSSFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFV 676 TL+ S FG+ WLI +AFF +RGFIKTGLG RI+Y FV Sbjct: 78 TLSIEDTLSGFGNKTIWLIVIAFFISRGFIKTGLGARISYVFV 120
>sp|P75763|YBHI_ECOLI Inner membrane protein ybhI OS=Escherichia coli (strain K12) GN=ybhI PE=1 SV=1 Length = 477
Score = 72.0 bits (175), Expect = 3e-12 Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 6/109 (5%) Frame = +2
Query: 368 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLGACVLT- 544 L++ +A I F+PAP+G+S+ AW L I+LA IVG++ +P P V L+ + A ++ Sbjct: 9 LILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVV 68
Query: 545 -----KTLTFAAAFSSFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFV 676 A S + WL+ AF + F+ TGLG RIAY + Sbjct: 69 GNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLI 117
>sp|Q3YXI0|TTDT_SHISS L-tartrate/succinate antiporter OS=Shigella sonnei (strain Ss046) GN=ttdT PE=3 SV=1 Length = 487
Score = 66.6 bits (161), Expect = 1e-10 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 18/116 (15%) Frame = +2
Query: 371 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 547 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 548 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGLGNRIA 664 L F+ A S F + + WLI AF F G+ KTGLG RIA Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIA 126
>sp|Q0TD43|TTDT_ECOL5 L-tartrate/succinate antiporter OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 66.6 bits (161), Expect = 1e-10 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 18/116 (15%) Frame = +2
Query: 371 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 547 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 548 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGLGNRIA 664 L F+ A S F + + WLI AF F G+ KTGLG RIA Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIA 126
>sp|Q8XBK4|TTDT_ECO57 L-tartrate/succinate antiporter OS=Escherichia coli O157:H7 GN=ttdT PE=2 SV=1 Length = 487
Score = 66.6 bits (161), Expect = 1e-10 Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 18/116 (15%) Frame = +2
Query: 371 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 547 L +A I IP P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 548 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGLGNRIA 664 L F+ A S F + + WLI AF F G+ KTGLG RIA Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIA 126
>sp|Q57048|Y020_HAEIN Uncharacterized transporter HI0020 OS=Haemophilus influenzae GN=HI0020 PE=3 SV=1 Length = 479
Score = 66.2 bits (160), Expect = 1e-10 Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 11/114 (9%) Frame = +2
Query: 368 LLISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQP-----LPLGAVALMGL-- 526 L+I +A + + +PAP G+S AW+LL +++ATIVG++ +P + L A+A+ G+ Sbjct: 9 LVILMAIPLITFLLPAPDGLSLIAWRLLGVYIATIVGLVLKPYGEPVILLAAIAVSGVII 68
Query: 527 ----GACVLTKTLTFAAAFSSFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFV 676 GA L K + S WLI AF + F+ TGLG RIAY + Sbjct: 69 GNTEGAKELVKVGNMLDGYKS---GTTWLIFTAFTLSSAFVITGLGKRIAYHMI 119
>sp|Q83JJ9|TTDT_SHIFL L-tartrate/succinate antiporter OS=Shigella flexneri GN=ttdT PE=3 SV=1 Length = 487
Score = 65.9 bits (159), Expect = 2e-10 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 18/116 (15%) Frame = +2
Query: 371 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 547 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 548 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGLGNRIA 664 L F+ A S F + + WLI AF F G+ KTGLG RIA Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIA 126
>sp|P39414|TTDT_ECOLI L-tartrate/succinate antiporter OS=Escherichia coli (strain K12) GN=ttdT PE=1 SV=2 Length = 487
Score = 65.9 bits (159), Expect = 2e-10 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 18/116 (15%) Frame = +2
Query: 371 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 547 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPVPAGLENHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 548 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGLGNRIA 664 L F+ A S F + + WLI AF F G+ KTGLG RIA Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIA 126
>sp|Q1R6R8|TTDT_ECOUT L-tartrate/succinate antiporter OS=Escherichia coli (strain UTI89 / UPEC) GN=ttdT PE=2 SV=1 Length = 487
Score = 65.5 bits (158), Expect = 3e-10 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 18/116 (15%) Frame = +2
Query: 371 LISIATGVAIWFIPAPSGVSKNAWQLLSIFLATIVGIITQPLPLGAVALMGLG-ACVLTK 547 L +A I +P P+G+ + W ++F IVG+I +P+P VA++G+ +L+ Sbjct: 11 LAPLAVIAIIALLPLPAGLESHTWLYFAVFTGVIVGLILEPVPGAVVAMVGISIIAILSP 70
Query: 548 TLTFAA-----------------AFSSFGDPIPWLIALAFFFARGFIKTGLGNRIA 664 L F+ A S F + + WLI AF F G+ KTGLG RIA Sbjct: 71 WLLFSPEQLAQPGFKFTAKSLSWAVSGFSNSVIWLIFAAFMFGTGYEKTGLGRRIA 126
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LXV3 |
Definition |
tr|Q9LXV3|Q9LXV3_ARATH 2-oxoglutarate/malate translocator-like protein OS=Arabidopsis thaliana |
Align length |
111 |
Score (bit) |
198.0 |
E-value |
3.0e-49 |
Report |
|