DK962479 |
Clone id |
TST39A01NGRL0013_P20 |
Library |
TST39 |
Length |
605 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_P20. 5' end sequence. |
Accession |
DK962479 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3352Contig1 |
Sequence |
CACGTTTAGGAAGTTCCTCGATCATCAACATCGTCATCATCACCACCACTACCACCACCA TCTTCTCTGCTTCTCACGGGCCGCCATCACCCGCAGCCCCTAGACTCCGCACATACGGTG ATGAGCTGCACCATGCATTCGCGATCGCCGCAGTTTGCTCCCCTCTTCTTGCTGCTTCTA ATCTGTGCCGTTGGAGCTTCATGGTCTCCTCCTCTCTGTAAAGCTAATGAATATGACGAG GCCATGGCGCCTCAGCAAGGCGATGTTTGCCAGGAGCCCCCGTCCAATGGCTCTTACATT CCTGCTCCTGGTGTCACCGATTCGGATGCCGACAACATCCTGGTTGCGTTAAATCTTGAG TACCTTGAGAGTGAGTTCTTCTTGTTTGGTGCAACTGGCGCTGGGCTAGACCGCTTTGCG CCTGAACTTGCTGCTGGGGGTCCTGCCCCAATCGGTGCTCAGAAAGCCAACTTGGACAAT CTCACAAGGGACATCATTGAGCAATTTGGTTATCAAGAGGTTGGCCATCTCACAGCTATA AAGGAGACTATACCTGAGGCTTTCCCAAGGGTACAGCTGGATTTGAGGAAGGAGGTATTT GCTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P22242 |
Definition |
sp|P22242|DRPE_CRAPL Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum |
Align length |
97 |
Score (bit) |
99.8 |
E-value |
1.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9C7Z0 |
Definition |
tr|Q9C7Z0|Q9C7Z0_ARATH Dessication-related protein, putative; 70055-71849 OS=Arabidopsis thaliana |
Align length |
96 |
Score (bit) |
123.0 |
E-value |
9.0e-27 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962479|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_P20, 5' (605 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9C7Z0|Q9C7Z0_ARATH Dessication-related protein, putative; 70... 123 9e-27 tr|Q8LAU8|Q8LAU8_ARATH Dessication-related protein, putative OS=... 122 1e-26 tr|A2Q670|A2Q670_MEDTR Desiccation-related protein PCC13-62, put... 114 4e-24 tr|A7Q093|A7Q093_VITVI Chromosome chr7 scaffold_42, whole genome... 114 6e-24 tr|B4G218|B4G218_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|Q9LZJ2|Q9LZJ2_ARATH Putative uncharacterized protein F26K9_16... 108 3e-22 tr|A9S267|A9S267_PHYPA Predicted protein OS=Physcomitrella paten... 107 7e-22 tr|A2Q669|A2Q669_MEDTR Desiccation-related protein PCC13-62, put... 106 9e-22 tr|A2Q666|A2Q666_MEDTR Desiccation-related protein PCC13-62, put... 100 9e-20 tr|A7P527|A7P527_VITVI Chromosome chr4 scaffold_6, whole genome ... 98 3e-19 tr|A5AXH5|A5AXH5_VITVI Putative uncharacterized protein OS=Vitis... 98 3e-19 tr|A7Q8T7|A7Q8T7_VITVI Chromosome chr5 scaffold_64, whole genome... 97 7e-19 tr|A3AHV2|A3AHV2_ORYSJ Putative uncharacterized protein OS=Oryza... 97 7e-19 tr|Q10LK1|Q10LK1_ORYSJ Os03g0345300 protein OS=Oryza sativa subs... 95 3e-18 tr|A2XGL9|A2XGL9_ORYSI Putative uncharacterized protein OS=Oryza... 95 3e-18 tr|Q01L47|Q01L47_ORYSA H0502B11.4 protein OS=Oryza sativa GN=H05... 92 2e-17 tr|A2XT28|A2XT28_ORYSI Putative uncharacterized protein OS=Oryza... 92 2e-17 tr|Q7X6I8|Q7X6I8_ORYSJ OSJNBb0118P14.11 protein (Putative unchar... 90 9e-17 tr|Q0JDG9|Q0JDG9_ORYSJ Os04g0404400 protein (Fragment) OS=Oryza ... 90 9e-17 tr|B4G1G1|B4G1G1_MAIZE Desiccation-related protein PCC13-62 OS=Z... 89 2e-16 tr|B6TNA6|B6TNA6_MAIZE Desiccation-related protein PCC13-62 OS=Z... 85 4e-15 tr|Q65XR0|Q65XR0_ORYSJ Os05g0151100 protein OS=Oryza sativa subs... 84 5e-15 tr|A3B019|A3B019_ORYSJ Putative uncharacterized protein OS=Oryza... 84 5e-15 tr|B8AY51|B8AY51_ORYSI Putative uncharacterized protein OS=Oryza... 84 8e-15 tr|A9SYP0|A9SYP0_PHYPA Predicted protein OS=Physcomitrella paten... 67 8e-10 tr|B1PMG8|B1PMG8_9LAMI Desiccation-related protein Lb_13-62 (Fra... 50 8e-05 tr|Q92YS4|Q92YS4_RHIME Putative uncharacterized protein OS=Rhizo... 44 0.007 tr|A6UK42|A6UK42_SINMW Putative uncharacterized protein OS=Sinor... 44 0.007 tr|B2T1B3|B2T1B3_BURPP Putative uncharacterized protein OS=Burkh... 43 0.012 tr|Q143D2|Q143D2_BURXL Putative uncharacterized protein OS=Burkh... 43 0.016
>tr|Q9C7Z0|Q9C7Z0_ARATH Dessication-related protein, putative; 70055-71849 OS=Arabidopsis thaliana GN=T2J15.11 PE=4 SV=1 Length = 302
Score = 123 bits (308), Expect = 9e-27 Identities = 64/96 (66%), Positives = 73/96 (76%) Frame = +1
Query: 316 TDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIGAQKANLDNLTRDI 495 TD D + LNLEYLE+EFFLFGA G GLD+ AP L GGP+PIGAQKANLD LTRDI Sbjct: 27 TDQDRKLLEFPLNLEYLEAEFFLFGALGLGLDKVAPNLTMGGPSPIGAQKANLDPLTRDI 86
Query: 496 IEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVFA 603 I QF +QEVGHL AIK+T+ + F R QLDL K+ FA Sbjct: 87 ILQFAWQEVGHLRAIKKTV-KGFARPQLDLSKKAFA 121
>tr|Q8LAU8|Q8LAU8_ARATH Dessication-related protein, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 315
Score = 122 bits (307), Expect = 1e-26 Identities = 64/96 (66%), Positives = 73/96 (76%) Frame = +1
Query: 316 TDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIGAQKANLDNLTRDI 495 TD D + LNLEYLE+EFFLFGA G GLD+ AP L GGP+PIGAQKANLD LTRDI Sbjct: 40 TDQDRKLLEFPLNLEYLEAEFFLFGALGFGLDKVAPNLTMGGPSPIGAQKANLDPLTRDI 99
Query: 496 IEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVFA 603 I QF +QEVGHL AIK+T+ + F R QLDL K+ FA Sbjct: 100 ILQFAWQEVGHLRAIKKTV-KGFARPQLDLSKKAFA 134
>tr|A2Q670|A2Q670_MEDTR Desiccation-related protein PCC13-62, putative OS=Medicago truncatula GN=MtrDRAFT_AC173289g3v1 PE=4 SV=1 Length = 302
Score = 114 bits (285), Expect = 4e-24 Identities = 61/104 (58%), Positives = 71/104 (68%) Frame = +1
Query: 292 SYIPAPGVTDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIGAQKAN 471 S++ P SD D + LNLEYLE+EFFLFG+ G GLD APELA GGP PIGA+ A Sbjct: 28 SFVLTPPKNYSDVDLLEFPLNLEYLEAEFFLFGSLGHGLDVVAPELAEGGPPPIGAKVAR 87
Query: 472 LDNLTRDIIEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVFA 603 L +L RD+I QFG QE+GHL AIK T+ FPR LDL K FA Sbjct: 88 LGDLVRDVILQFGVQEIGHLRAIKSTV-RGFPRPLLDLSKSSFA 130
>tr|A7Q093|A7Q093_VITVI Chromosome chr7 scaffold_42, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027963001 PE=4 SV=1 Length = 305
Score = 114 bits (284), Expect = 6e-24 Identities = 64/113 (56%), Positives = 74/113 (65%) Frame = +1
Query: 262 DVCQEPPSNGSYIPAPGVTDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGG 441 D+ P G P V D D D I ALNLE+LE+EFFL GA G GLD+ AP+LA GG Sbjct: 21 DIASSAPGCG-----PLVAD-DVDRIQFALNLEFLEAEFFLHGALGEGLDQVAPQLARGG 74
Query: 442 PAPIGAQKANLDNLTRDIIEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVF 600 P PIGA+KANLD+ R IIE+FGYQEVGHL AI + E PR LDL + F Sbjct: 75 PPPIGARKANLDDFERRIIEEFGYQEVGHLRAITSAV-EGLPRPPLDLSPQNF 126
>tr|B4G218|B4G218_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 353
Score = 112 bits (279), Expect = 2e-23 Identities = 70/167 (41%), Positives = 91/167 (54%), Gaps = 11/167 (6%) Frame = +1
Query: 136 HSRSPQFAPLFLLLLICAVGASWSPPLCKANEYDEAMAPQQGDVCQEPPSNGSYI----- 300 HSRS L + + C GAS SP + + ++ V + SY+ Sbjct: 7 HSRSVPLLLLVIGVCCCCSGAS-SPVVGRLDDDPTCPREPTAAVAAVSSAESSYVEPRRC 65
Query: 301 --PAPGVTDS----DADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIGAQ 462 PAP + + D D + ALNLEY E+EFFL GA G GLD AP LA GGP P+GA+ Sbjct: 66 QPPAPHIAVAVFPYDVDPMQFALNLEYTEAEFFLHGAYGVGLDHLAPRLALGGPPPVGAR 125
Query: 463 KANLDNLTRDIIEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVFA 603 KANLD +TR I+ +FG QEVGH+ AI+ T+ PR +DL FA Sbjct: 126 KANLDEVTRRIVAEFGLQEVGHIRAIQRTV-GGIPRPLIDLSAHNFA 171
>tr|Q9LZJ2|Q9LZJ2_ARATH Putative uncharacterized protein F26K9_160 OS=Arabidopsis thaliana GN=F26K9_160 PE=2 SV=1 Length = 317
Score = 108 bits (269), Expect = 3e-22 Identities = 56/109 (51%), Positives = 74/109 (67%) Frame = +1
Query: 277 PPSNGSYIPAPGVTDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIG 456 P +GS + ++ SD D + A+NLE+ E+EFFL GATG GLD + LA GGP PIG Sbjct: 18 PAKSGSCSCSGNISASDVDRVHFAMNLEFTEAEFFLKGATGKGLDAYNATLAKGGPPPIG 77
Query: 457 AQKANLDNLTRDIIEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVFA 603 A+KANLD +T IIE+FGYQE+GHL AI + + PR ++L +E FA Sbjct: 78 AKKANLDPITNRIIEEFGYQEIGHLRAITD-MTGGIPRPLINLTRENFA 125
>tr|A9S267|A9S267_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122983 PE=4 SV=1 Length = 296
Score = 107 bits (266), Expect = 7e-22 Identities = 58/105 (55%), Positives = 68/105 (64%), Gaps = 4/105 (3%) Frame = +1
Query: 301 PAPGVTDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIGAQKANLDN 480 P T D + VALNLEY E+E+FL+GA G GLD+ AP L GGP PIGAQKANLD Sbjct: 13 PGNYTTTKDKELTQVALNLEYFEAEYFLWGAYGYGLDKIAPYLVDGGPPPIGAQKANLDA 72
Query: 481 LTRDIIEQFGYQEVGHLTAIKETIPE----AFPRVQLDLRKEVFA 603 DI Q G QEVGHL AIK + + AFPR QLD+ K+ +A Sbjct: 73 YYTDIYIQMGLQEVGHLRAIKRALGDPPRCAFPRTQLDISKKTWA 117
>tr|A2Q669|A2Q669_MEDTR Desiccation-related protein PCC13-62, putative OS=Medicago truncatula GN=MtrDRAFT_AC173289g13v1 PE=4 SV=1 Length = 297
Score = 106 bits (265), Expect = 9e-22 Identities = 59/99 (59%), Positives = 67/99 (67%) Frame = +1
Query: 307 PGVTDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIGAQKANLDNLT 486 P T SD D + LNLEYLE+EFFLFG+ G GLD APELA GGP PIGA+ A L Sbjct: 34 PPETFSDDDLLEFPLNLEYLEAEFFLFGSLGHGLDVVAPELAEGGPPPIGAKMAKLGKFI 93
Query: 487 RDIIEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVFA 603 +DII QFG QEVGHL AIK T+ + FPR +DL FA Sbjct: 94 KDIILQFGLQEVGHLRAIKSTV-KGFPRPCMDLSISSFA 131
>tr|A2Q666|A2Q666_MEDTR Desiccation-related protein PCC13-62, putative OS=Medicago truncatula GN=MtrDRAFT_AC173289g11v1 PE=4 SV=1 Length = 299
Score = 100 bits (248), Expect = 9e-20 Identities = 57/97 (58%), Positives = 67/97 (69%), Gaps = 1/97 (1%) Frame = +1
Query: 316 TDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIGAQKANL-DNLTRD 492 T SD D + LNLEYLE+EFFLFG+ G GLD APELA GGP+PIGA+ A L D + Sbjct: 31 TLSDVDLLEFPLNLEYLEAEFFLFGSFGHGLDAVAPELADGGPSPIGAKVAKLKDRKIKQ 90
Query: 493 IIEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVFA 603 II +FG QEVGHL AIK T+ + F R L+L K FA Sbjct: 91 IIFEFGLQEVGHLRAIKSTV-KGFSRPLLNLSKSTFA 126
>tr|A7P527|A7P527_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032375001 PE=4 SV=1 Length = 292
Score = 98.2 bits (243), Expect = 3e-19 Identities = 51/100 (51%), Positives = 67/100 (67%) Frame = +1
Query: 304 APGVTDSDADNILVALNLEYLESEFFLFGATGAGLDRFAPELAAGGPAPIGAQKANLDNL 483 A V + D + + A NLE+LE+++FL+GA G GLD AP+L GGP PIGA+KA LDNL Sbjct: 16 AIAVDEGDVNLLQFAENLEHLEADYFLWGALGYGLDEVAPQLVMGGPPPIGAKKAKLDNL 75
Query: 484 TRDIIEQFGYQEVGHLTAIKETIPEAFPRVQLDLRKEVFA 603 T +II +F Y+EV HL +K T+ FPR +DL FA Sbjct: 76 TLNIITEFAYEEVAHLRILKRTV-GGFPRPLMDLSAGNFA 114
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