DK962456
Clone id TST39A01NGRL0013_O20
Library
Length 331
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_O20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GTTGATTACGGGCTATCTAACATTGGAGGAAGACTATCATAAGAAGTCGGGCACTTGTGA
AGTAGCTGGCGGAATAGTCACACGCACTCCGTACGTGATATATTGCCGTCGTTGCTGATT
CAGCGTAGTGGATGCTCTATGCACTGTGTATGAGCCGTGGACCTGTGCGAGGCTTTTGTG
CTACGTCACATTGGAAACATGGTACCACCTTAGACCGGGAACTCTTGCTCATCTGCGGCT
TCTGCCATTGAGTATGCGGTGCTGCACTTGAAGGTGAACGCATCTTGTTGTCATTGACCA
CGGCCGATGGGGTGACCTCCCAGCCTTGATG
■■Homology search results ■■ -
sp_hit_id P46513
Definition sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis
Align length 47
Score (bit) 47.4
E-value 2.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962456|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_O20, 5'
(331 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria... 47 2e-05
sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=... 45 9e-05
sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2... 45 9e-05
sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=... 45 9e-05
sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis P... 45 9e-05
sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sa... 43 4e-04
sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicoti... 43 6e-04
sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thalian... 43 6e-04
sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabid... 42 7e-04
sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinac... 41 0.002
sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeu... 39 0.011
sp|O83388|TILS_TREPA tRNA(Ile)-lysidine synthase OS=Treponema pa... 33 0.34
sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori J... 33 0.45
sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (st... 32 0.99
sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongat... 31 2.2
sp|O17582|SPR4_CAEEL Suppressor of presenilin protein 4 OS=Caeno... 31 2.2
sp|Q0DWT8|RH1_ORYSJ DEAD-box ATP-dependent RNA helicase 1 OS=Ory... 30 4.9
sp|A1L390|PKHG3_HUMAN Pleckstrin homology domain-containing fami... 30 4.9
sp|Q13261|I15RA_HUMAN Interleukin-15 receptor subunit alpha OS=H... 30 4.9
sp|Q5BCC5|CAN_EMENI Carbonic anhydrase OS=Emericella nidulans GN... 30 4.9

>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria
linearis PE=2 SV=1
Length = 190

Score = 47.4 bits (111), Expect = 2e-05
Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV------NASCC 291
EAFV+R+I NMVPP S A +AIEYAVLHLKV SCC
Sbjct: 38 EAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCC 84


>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2
SV=1
Length = 329

Score = 45.4 bits (106), Expect = 9e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAFV+R++ NMVPP S +A+EYAVLHLKV
Sbjct: 177 EAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 212


>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2
SV=1
Length = 330

Score = 45.4 bits (106), Expect = 9e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAFV+R++ NMVPP S +A+EYAVLHLKV
Sbjct: 178 EAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213


>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2
SV=2
Length = 330

Score = 45.4 bits (106), Expect = 9e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAFV+R++ NMVPP S +A+EYAVLHLKV
Sbjct: 178 EAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213


>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2
SV=1
Length = 330

Score = 45.4 bits (106), Expect = 9e-05
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAFV+R++ NMVPP S +A+EYAVLHLKV
Sbjct: 178 EAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKV 213


>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum
sativum PE=1 SV=1
Length = 328

Score = 43.1 bits (100), Expect = 4e-04
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKVN 279
EAFV+R++ N+VPP + +AIEYAVLHLKV+
Sbjct: 176 EAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVS 212


>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana
tabacum PE=2 SV=1
Length = 321

Score = 42.7 bits (99), Expect = 6e-04
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAFV+R+I NMVP S +AIEYAVLHLKV
Sbjct: 169 EAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKV 204


>sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana
GN=CA2 PE=1 SV=2
Length = 259

Score = 42.7 bits (99), Expect = 6e-04
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
+AFV+R+I NMVPP + +AIEYAVLHLKV
Sbjct: 107 DAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKV 142


>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic
OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2
Length = 347

Score = 42.4 bits (98), Expect = 7e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
+AFV+R+I NMVPP +AIEYAVLHLKV
Sbjct: 184 DAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKV 219


>sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinacia
oleracea PE=1 SV=2
Length = 319

Score = 40.8 bits (94), Expect = 0.002
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAF++R+I NMVP + + +AIEYAVLHLKV
Sbjct: 167 EAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKV 202


tr_hit_id B7FL34
Definition tr|B7FL34|B7FL34_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 47
Score (bit) 48.9
E-value 0.0001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962456|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_O20, 5'
(331 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7FL34|B7FL34_MEDTR Putative uncharacterized protein OS=Medic... 49 1e-04
tr|Q84Y10|Q84Y10_FLABI Carbonic anhydrase OS=Flaveria bidentis P... 47 4e-04
tr|Q2Q064|Q2Q064_FLAPR Carbonic anhydrase OS=Flaveria pringlei P... 47 4e-04
tr|A9PEY8|A9PEY8_POPTR Carbonic anhydrase OS=Populus trichocarpa... 47 6e-04
tr|A9PED7|A9PED7_POPTR Carbonic anhydrase OS=Populus trichocarpa... 47 6e-04
tr|A1BQP3|A1BQP3_CUCSA Carbonic anhydrase (Fragment) OS=Cucumis ... 46 8e-04
tr|Q5NE21|Q5NE21_SOLLC Carbonic anhydrase OS=Solanum lycopersicu... 46 0.001
tr|B8LNL1|B8LNL1_PICSI Putative uncharacterized protein OS=Picea... 46 0.001
tr|A9PJH1|A9PJH1_POPJC Carbonic anhydrase OS=Populus jackii PE=2... 46 0.001
tr|A9PIY3|A9PIY3_POPJC Carbonic anhydrase OS=Populus jackii PE=2... 46 0.001
tr|A9NNY0|A9NNY0_PICSI Carbonic anhydrase OS=Picea sitchensis PE... 46 0.001
tr|Q94CE4|Q94CE4_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 45 0.002
tr|O64595|O64595_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 45 0.002
tr|A7QNW6|A7QNW6_VITVI Chromosome chr1 scaffold_135, whole genom... 45 0.002
tr|Q41089|Q41089_9ROSI Carbonic anhydrase OS=Populus tremula x P... 45 0.002
tr|Q41088|Q41088_9ROSI Carbonic anhydrase OS=Populus tremula x P... 45 0.002
tr|Q9XF69|Q9XF69_GOSHI Carbonic anhydrase (Fragment) OS=Gossypiu... 44 0.003
tr|Q9SYW6|Q9SYW6_GOSHI Carbonic anhydrase (Fragment) OS=Gossypiu... 44 0.003
tr|Q8LSC8|Q8LSC8_GOSHI Carbonic anhydrase OS=Gossypium hirsutum ... 44 0.003
tr|A9P0C5|A9P0C5_PICSI Carbonic anhydrase OS=Picea sitchensis PE... 44 0.003
tr|A9NSY6|A9NSY6_PICSI Carbonic anhydrase OS=Picea sitchensis PE... 44 0.003
tr|Q1PG92|Q1PG92_STRAF Carbonic anhydrase (Fragment) OS=Striga a... 44 0.005
tr|B2ZCP6|B2ZCP6_LEMMI Carbonic anhydrase (Fragment) OS=Lemna mi... 44 0.005
tr|B1VK36|B1VK36_SOLLC Carbonic anhydrase OS=Solanum lycopersicu... 44 0.005
tr|A9NX90|A9NX90_PICSI Putative uncharacterized protein OS=Picea... 43 0.007
tr|Q8W183|Q8W183_TOBAC Carbonic anhydrase OS=Nicotiana tabacum P... 43 0.009
tr|Q84Y09|Q84Y09_FLABI Carbonic anhydrase OS=Flaveria bidentis P... 43 0.009
tr|Q3E9H5|Q3E9H5_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 43 0.009
tr|Q2V377|Q2V377_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 43 0.009
tr|Q2V376|Q2V376_ARATH Carbonic anhydrase OS=Arabidopsis thalian... 43 0.009

>tr|B7FL34|B7FL34_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 278

Score = 48.9 bits (115), Expect = 1e-04
Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV------NASCC 291
EAFV+R+I NMVPP S A +AIEYAVLHLKV SCC
Sbjct: 126 EAFVVRNIANMVPPFDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCC 172


>tr|Q84Y10|Q84Y10_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2
SV=1
Length = 279

Score = 47.4 bits (111), Expect = 4e-04
Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV------NASCC 291
EAFV+R+I NMVPP S A +AIEYAVLHLKV SCC
Sbjct: 127 EAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCC 173


>tr|Q2Q064|Q2Q064_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2
SV=1
Length = 281

Score = 47.4 bits (111), Expect = 4e-04
Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV------NASCC 291
EAFV+R+I NMVPP S A +AIEYAVLHLKV SCC
Sbjct: 130 EAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCC 176


>tr|A9PEY8|A9PEY8_POPTR Carbonic anhydrase OS=Populus trichocarpa
PE=2 SV=1
Length = 256

Score = 46.6 bits (109), Expect = 6e-04
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV------NASCC 291
EAF++R+I NMVPP S +AIEYAVLHLKV SCC
Sbjct: 104 EAFMIRNIANMVPPYDKTKYSGVGAAIEYAVLHLKVENIVVIGHSCC 150


>tr|A9PED7|A9PED7_POPTR Carbonic anhydrase OS=Populus trichocarpa
PE=2 SV=1
Length = 256

Score = 46.6 bits (109), Expect = 6e-04
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV------NASCC 291
EAF++R+I NMVPP S +AIEYAVLHLKV SCC
Sbjct: 104 EAFMIRNIANMVPPYDKTKYSGVGAAIEYAVLHLKVENIVVIGHSCC 150


>tr|A1BQP3|A1BQP3_CUCSA Carbonic anhydrase (Fragment) OS=Cucumis
sativus PE=2 SV=1
Length = 99

Score = 46.2 bits (108), Expect = 8e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAFV+R++ N+VPP + S SAIEYAVLHLKV
Sbjct: 20 EAFVVRNVANLVPPYDQDKYSGTGSAIEYAVLHLKV 55


>tr|Q5NE21|Q5NE21_SOLLC Carbonic anhydrase OS=Solanum lycopersicum
GN=ca1 PE=2 SV=1
Length = 268

Score = 45.8 bits (107), Expect = 0.001
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV------NASCC 291
EAFV+R+I NMVPP S +A+EYAV+HLKV SCC
Sbjct: 116 EAFVVRNIANMVPPYDQTKYSGVGAAVEYAVVHLKVENILVIGHSCC 162


>tr|B8LNL1|B8LNL1_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 232

Score = 45.8 bits (107), Expect = 0.001
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Frame = +1

Query: 133 CSMHCV*AVDLCEAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV------NASCC 291
C H + +L EAFV+R+I NMV P N ++A+EYAVLHLKV SCC
Sbjct: 108 CPSHVL-KFNLGEAFVVRNIANMVAPYEKNEYPGTSAAVEYAVLHLKVEHILVMGHSCC 165


>tr|A9PJH1|A9PJH1_POPJC Carbonic anhydrase OS=Populus jackii PE=2
SV=1
Length = 321

Score = 45.8 bits (107), Expect = 0.001
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAFVLR++ NMVPP + +AIEYAVLHLKV
Sbjct: 169 EAFVLRNVANMVPPYDQTKYAGVGAAIEYAVLHLKV 204


>tr|A9PIY3|A9PIY3_POPJC Carbonic anhydrase OS=Populus jackii PE=2
SV=1
Length = 258

Score = 45.8 bits (107), Expect = 0.001
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1

Query: 169 EAFVLRHIGNMVPP*TGNSCSSAASAIEYAVLHLKV 276
EAFVLR++ NMVPP + +AIEYAVLHLKV
Sbjct: 106 EAFVLRNVANMVPPYDQTKYAGVGAAIEYAVLHLKV 141