DK962389 |
Clone id |
TST39A01NGRL0013_L21 |
Library |
TST39 |
Length |
629 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_L21. 5' end sequence. |
Accession |
DK962389 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL922Contig1 |
Sequence |
TCCATTTACAATTTTGGATGTGAAGAGGGGAAGATGGCGGGTCTAAGAATTTCCCTCTCT CCGGCAGCCCCGCTTGTGGGTCGCCCAGACGGTCATGGGTCTGCCCAGTCTCCAAGGTTT CTGGGTTGCAGAGAGTTCCATCTTTTCTGGCCAGGCCAAAAAGGCAGCAGACACATCCAT CACCGCAACAAAATAGTATGTGCATTGGGTGGTTCTTCTGATGAAGGTATGGCAGTTTTT CCGAAGATAAATGTTGGAGATCCATATAAGCGGCTAGGTATTCCCCGTGATGCTTCTGAA GAAGAAATCCGAGAAGCTTACAAATATCTCATGGCACAGTATGGTTGGCATGATAAAAGC AGGACTTCCATTGAAACTGCCTATGACAAAATTCTATTGGAGAGTCTGAAGTCTAGGAGG AGCCCCAAAATCGACGTTCAAAAAGCCTTGAGAAATAATTATGCAAAGCTGCCACCCTGG GTTCGCAACTTGTCGAATATATATGATGTTCCTTCTTCAAAAGTAATCTTAATTAGGGCA GCATTTTTTACTCTCTTGGGAGTATGGAGTGCACTTGATCAGACACAAGGAGGACCAGCA TTCCAGGTTGCGGTTTCTCTTGTTGGTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9HGN7 |
Definition |
sp|Q9HGN7|SEC63_SCHPO Translocation protein sec63 OS=Schizosaccharomyces pombe |
Align length |
74 |
Score (bit) |
39.3 |
E-value |
0.017 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SI00 |
Definition |
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
139 |
Score (bit) |
150.0 |
E-value |
8.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962389|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_L21, 5' (629 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella paten... 150 8e-35 tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea... 146 9e-34 tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella paten... 139 1e-31 tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella paten... 137 4e-31 tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis... 136 1e-30 tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum... 122 2e-26 tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea m... 120 7e-26 tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza... 120 9e-26 tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza... 120 9e-26 tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza... 117 4e-25 tr|Q9FN50|Q9FN50_ARATH Emb|CAB62636.1 (Cell growth defect factor... 117 7e-25 tr|A9S115|A9S115_PHYPA Predicted protein (Fragment) OS=Physcomit... 114 4e-24 tr|Q0DTD2|Q0DTD2_ORYSJ Os03g0255200 protein OS=Oryza sativa subs... 113 8e-24 tr|B8AKA7|B8AKA7_ORYSI Putative uncharacterized protein OS=Oryza... 113 8e-24 tr|B6TCK1|B6TCK1_MAIZE DnaJ domain containing protein OS=Zea may... 113 1e-23 tr|Q94C78|Q94C78_ARATH Putative uncharacterized protein At3g5114... 112 2e-23 tr|Q9SD32|Q9SD32_ARATH Putative uncharacterized protein F24M12.1... 108 2e-22 tr|B6TKC3|B6TKC3_MAIZE Putative uncharacterized protein OS=Zea m... 106 1e-21 tr|B4FF72|B4FF72_MAIZE Putative uncharacterized protein OS=Zea m... 85 3e-15 tr|Q00SI4|Q00SI4_OSTTA Homology to unknown gene OS=Ostreococcus ... 79 2e-13 tr|A4SA03|A4SA03_OSTLU Predicted protein OS=Ostreococcus lucimar... 75 2e-12 tr|B7K9K5|B7K9K5_9CHRO Heat shock protein DnaJ domain protein OS... 69 3e-10 tr|A8IKQ9|A8IKQ9_CHLRE Predicted protein OS=Chlamydomonas reinha... 68 4e-10 tr|Q3M3C6|Q3M3C6_ANAVT Putative uncharacterized protein OS=Anaba... 63 2e-08 tr|A0ZMC6|A0ZMC6_NODSP Putative uncharacterized protein OS=Nodul... 62 4e-08 tr|Q8YS32|Q8YS32_ANASP All3259 protein OS=Anabaena sp. (strain P... 61 6e-08 tr|Q8DGG9|Q8DGG9_THEEB Tlr2348 protein OS=Thermosynechococcus el... 61 6e-08 tr|Q2JL16|Q2JL16_SYNJB Putative uncharacterized protein OS=Synec... 60 1e-07 tr|Q10Z68|Q10Z68_TRIEI Putative uncharacterized protein OS=Trich... 60 1e-07 tr|B7JW09|B7JW09_SYNP8 Heat shock protein DnaJ domain protein OS... 57 1e-06
>tr|A9SI00|A9SI00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_212552 PE=4 SV=1 Length = 214
Score = 150 bits (378), Expect = 8e-35 Identities = 72/139 (51%), Positives = 100/139 (71%), Gaps = 2/139 (1%) Frame = +1
Query: 211 GSSDEGMA--VFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAY 384 GSSD + VFP++ V DP+KRLG+ +DASEEE+REA YL+ QY H+KSR +IE+AY Sbjct: 6 GSSDVNSSGPVFPRLGVQDPFKRLGVSQDASEEEVREARNYLVEQYNGHEKSREAIESAY 65
Query: 385 DKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGV 564 D I+++S + R++ K+D++ LR + PPWVR + N+ +VPS ++ RAA F LLGV Sbjct: 66 DTIIMQSFRVRKASKMDLKSNLRKKVEESPPWVRGIVNMIEVPSKTIMGQRAALFLLLGV 125
Query: 565 WSALDQTQGGPAFQVAVSL 621 WS + GGPAFQVA+SL Sbjct: 126 WSVFNPANGGPAFQVAISL 144
>tr|A9NX64|A9NX64_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 279
Score = 146 bits (369), Expect = 9e-34 Identities = 73/161 (45%), Positives = 109/161 (67%), Gaps = 10/161 (6%) Frame = +1
Query: 172 HIHHRNKIV-------CALGGSSDEGMA---VFPKINVGDPYKRLGIPRDASEEEIREAY 321 H RN+++ CA+ S + VFP++NV DPYKRLG+ + ASEEEI+EA Sbjct: 50 HAQSRNELLIRRLEPRCAMDASFGGRVGHPPVFPRVNVWDPYKRLGVSKYASEEEIQEAR 109
Query: 322 KYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNI 501 +L+ QY H++S SIE A++KI+++S + R+ KI+++ L+ + PPWVR+L N Sbjct: 110 NFLIEQYAGHERSVESIEAAFEKIIMKSFRERKRSKINLKSKLKKKVDESPPWVRSLINF 169
Query: 502 YDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAFQVAVSLV 624 +VP S+VI+ RA F ++GVWS ++ ++GGPAFQVAVSLV Sbjct: 170 LEVPPSEVIIRRACLFAVIGVWSVMNSSEGGPAFQVAVSLV 210
>tr|A9TGC1|A9TGC1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222052 PE=4 SV=1 Length = 262
Score = 139 bits (350), Expect = 1e-31 Identities = 81/181 (44%), Positives = 109/181 (60%), Gaps = 7/181 (3%) Frame = +1
Query: 100 SAQSPRFL--GCREFHLFWPGQKGSRHIHHRNKIVC-----ALGGSSDEGMAVFPKINVG 258 S QS RF R+F L P KG +VC GG+ + VFP+ NV Sbjct: 21 SLQSHRFPTPALRQFGLSQPLPKG---------LVCRAADATFGGAENLKPPVFPRRNVR 71
Query: 259 DPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDV 438 DP+K LG+ DASEEEIREA YL QY H+ SR +IE AY+KI++ S + R++ KI++ Sbjct: 72 DPFKLLGVSPDASEEEIREAKNYLTEQYYGHEYSREAIEAAYEKIIMHSFRVRKASKINL 131
Query: 439 QKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAFQVAVS 618 + L+ + PPWV+ + N+ +VP+ + RAA F LLGVWS + +GGPAFQVAVS Sbjct: 132 KTNLKKKVEESPPWVQAILNMVEVPNKTITGQRAALFFLLGVWSVFNPAEGGPAFQVAVS 191
Query: 619 L 621 L Sbjct: 192 L 192
>tr|A9SGZ3|A9SGZ3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129803 PE=4 SV=1 Length = 203
Score = 137 bits (346), Expect = 4e-31 Identities = 68/129 (52%), Positives = 91/129 (70%) Frame = +1
Query: 235 VFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKILLESLKS 414 VFP+ NV DP+K LG+ DASEEEIREA YL QY H+ SR +IE AY+KI++ S + Sbjct: 5 VFPRRNVRDPFKLLGLSSDASEEEIREAKNYLTEQYHGHEYSREAIEAAYEKIIMHSYRV 64
Query: 415 RRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSALDQTQGG 594 R++ KI+++ L+ + PPWVR + N+ +VP+ +I RAA F LLGVWS + +GG Sbjct: 65 RKASKINLKTNLKKKVEESPPWVRAILNMVEVPNKTIIGQRAALFFLLGVWSVFNPAEGG 124
Query: 595 PAFQVAVSL 621 PAFQVAVSL Sbjct: 125 PAFQVAVSL 133
>tr|A5AD93|A5AD93_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017550 PE=4 SV=1 Length = 235
Score = 136 bits (342), Expect = 1e-30 Identities = 69/162 (42%), Positives = 102/162 (62%), Gaps = 5/162 (3%) Frame = +1
Query: 151 PGQKGSRHIHHRNKIV----CALGGSSDEG-MAVFPKINVGDPYKRLGIPRDASEEEIRE 315 P ++ S+ + ++ CA+ G + FP+I V DPYKRLGIP DASEEEI Sbjct: 4 PARENSKKLKANGLVIRGPRCAVDTPYGGGNLTKFPRITVWDPYKRLGIPPDASEEEIWS 63
Query: 316 AYKYLMAQYGWHDKSRTSIETAYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLS 495 + +L+ QY H++S SIE A++KIL+ S +RR KI+++ L+ + PPWV+NL Sbjct: 64 SRNFLLQQYAGHERSEESIEAAFEKILMASFINRRKTKINLKSKLKKKVEESPPWVKNLL 123
Query: 496 NIYDVPSSKVILIRAAFFTLLGVWSALDQTQGGPAFQVAVSL 621 N ++P+++VI R F +G WS ++ +GGPAFQVAVSL Sbjct: 124 NFVELPATEVIFRRLFLFAFMGGWSIINSAEGGPAFQVAVSL 165
>tr|Q307Y4|Q307Y4_SOLTU Cell growth defect factor-like OS=Solanum tuberosum PE=2 SV=1 Length = 251
Score = 122 bits (306), Expect = 2e-26 Identities = 58/140 (41%), Positives = 89/140 (63%) Frame = +1
Query: 199 CALGGSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIET 378 CA + + F ++NV DPYKRLGI RDASEEE+ + +L+ QY H++S SIE Sbjct: 41 CATDTAYGGNIPKFSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEA 100
Query: 379 AYDKILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLL 558 A++KIL++S +R+ KI+++ L+ + PPWV+NL + ++P +IL R F + Sbjct: 101 AFEKILMKSFINRKKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLFGFM 160
Query: 559 GVWSALDQTQGGPAFQVAVS 618 WS ++ + GPAFQVA+S Sbjct: 161 ACWSVMNSAEAGPAFQVAIS 180
>tr|B4FT56|B4FT56_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 270
Score = 120 bits (301), Expect = 7e-26 Identities = 58/135 (42%), Positives = 85/135 (62%) Frame = +1
Query: 217 SDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDKIL 396 S E + VFP+ + DPYK LG+ RDASEEEIR A +L+ QY H+ S +IE AY+KI+ Sbjct: 66 SYEHVPVFPRYRIRDPYKLLGVDRDASEEEIRGARNFLIQQYAGHEPSEEAIEGAYEKII 125
Query: 397 LESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWSAL 576 ++S + R+ KI+++ L+ + P WV+ L ++VPS +I R FF + WS Sbjct: 126 MKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGCFEVPSMDIISRRLFFFAFIAGWSIA 185
Query: 577 DQTQGGPAFQVAVSL 621 + GPAFQ+A+SL Sbjct: 186 TSAENGPAFQLAISL 200
>tr|A3BYC5|A3BYC5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028047 PE=4 SV=1 Length = 269
Score = 120 bits (300), Expect = 9e-26 Identities = 57/137 (41%), Positives = 85/137 (62%) Frame = +1
Query: 211 GSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDK 390 G S E + VFP+ + DPYK LG+ RDA+EEEIR A +L+ QY H+ S +IE AY+K Sbjct: 63 GFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAIEGAYEK 122
Query: 391 ILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWS 570 I+++S + R+ KI+++ L+ + P WV+ L ++VP +I R FF + WS Sbjct: 123 IIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFAFIAGWS 182
Query: 571 ALDQTQGGPAFQVAVSL 621 + GPAFQ+A+SL Sbjct: 183 IATSAENGPAFQLAISL 199
>tr|A2Z0Q5|A2Z0Q5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31181 PE=4 SV=1 Length = 269
Score = 120 bits (300), Expect = 9e-26 Identities = 57/137 (41%), Positives = 85/137 (62%) Frame = +1
Query: 211 GSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYDK 390 G S E + VFP+ + DPYK LG+ RDA+EEEIR A +L+ QY H+ S +IE AY+K Sbjct: 63 GFSYEHVPVFPRYRIRDPYKLLGVDRDAAEEEIRSARNFLIQQYAGHEPSEEAIEGAYEK 122
Query: 391 ILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVWS 570 I+++S + R+ KI+++ L+ + P WV+ L ++VP +I R FF + WS Sbjct: 123 IIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPQMDIISRRLFFFAFIAGWS 182
Query: 571 ALDQTQGGPAFQVAVSL 621 + GPAFQ+A+SL Sbjct: 183 IATSAENGPAFQLAISL 199
>tr|A3BT56|A3BT56_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026228 PE=4 SV=1 Length = 264
Score = 117 bits (294), Expect = 4e-25 Identities = 54/139 (38%), Positives = 86/139 (61%) Frame = +1
Query: 208 GGSSDEGMAVFPKINVGDPYKRLGIPRDASEEEIREAYKYLMAQYGWHDKSRTSIETAYD 387 GG DE +FP+ DPYK LG+ DASEEEIR A +L+ QY H+++ +IE AY+ Sbjct: 56 GGYGDEHAPLFPRQQAWDPYKILGVDHDASEEEIRSARNFLLKQYAGHEETEEAIEGAYE 115
Query: 388 KILLESLKSRRSPKIDVQKALRNNYAKLPPWVRNLSNIYDVPSSKVILIRAAFFTLLGVW 567 KI+++S R+ KI+++ ++ + P W + + ++VPS+++I R A F + W Sbjct: 116 KIIMKSYSHRKKSKINLKSKIQKQVEESPSWFKAMLGFFEVPSAEIISRRLALFAFIAGW 175
Query: 568 SALDQTQGGPAFQVAVSLV 624 S + + GP FQ+A+SLV Sbjct: 176 SIVTSAETGPTFQLALSLV 194
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