DK962346 |
Clone id |
TST39A01NGRL0013_J24 |
Library |
TST39 |
Length |
632 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_J24. 5' end sequence. |
Accession |
DK962346 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CGAGTGTGAGCACCAAAGGCAGGTCCAGCTGGGTGGCCGCCACAATATTGGCATCCATGG CGGGGTTCTACATTTTGTGGGGTCTTTCCAATGTGTACATCGTCAAGCATCTCCGAAATG ACTTTCCAACCAACTTCACTCGTGCGCATATCGTGGTGGCATCCATGATACTTGGTACAA CCATCTTCGGAGGTGTTATTGTCTTAGCTTGGTGGCTCTCTTCGACGAAGGCTTCCAGCA GTGCAACACCTCCTGACTCGCGAAAAGTTGGTATTGCGAGCAATTCTCCTTCTCCTGCTC CTCCTCATCATGACCAAGTTGCACACCAGCTTCAACCCATCGTCCGCACGCATCTGGATG AAGAAAACATAGCCGCCGCATCTCCTTGGAGTGGGACTCTCCGCCTTGGTGTCCGTCCAT TATGGAGTGATATATTCAACGCTCTCAACAAGGAGTACCACAACCAAAACATTGGCGTGC TGGTGTCGGGCTCCGAGGGAATGCAAGCAGATGTTGCCAAAGAGTGCCAAAGACACACCC GATTATTTGACACATCCAATGTTTTCCATTACCACGGTGTGAGCTTTGAGCTCTAGCTTA TACAATACAAGTGCGTGGAGCGGCCACAAAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54F44 |
Definition |
sp|Q54F44|NOXC_DICDI Superoxide-generating NADPH oxidase heavy chain subunit C OS=Dictyostelium discoideum |
Align length |
58 |
Score (bit) |
37.4 |
E-value |
0.065 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SQS6 |
Definition |
tr|A9SQS6|A9SQS6_PHYPA Ferric reductase-like transmembrane component with cytochrome b-245 motif OS=Physcomitrella patens subsp. patens |
Align length |
198 |
Score (bit) |
66.2 |
E-value |
2.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962346|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_J24, 5' (632 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SQS6|A9SQS6_PHYPA Ferric reductase-like transmembrane compo... 66 2e-09 tr|A7R0A2|A7R0A2_VITVI Chromosome undetermined scaffold_301, who... 64 8e-09 tr|Q2HST1|Q2HST1_MEDTR Ferric reductase-like transmembrane compo... 63 1e-08 tr|A9RKK9|A9RKK9_PHYPA Ferric reductase like transmembrane compo... 61 5e-08 tr|Q9LTA0|Q9LTA0_ARATH FRO2-like protein; NADPH oxidase-like OS=... 60 8e-08 tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidops... 60 8e-08 tr|Q0WLX7|Q0WLX7_ARATH FRO2-like protein (Fragment) OS=Arabidops... 60 8e-08 tr|Q9LT99|Q9LT99_ARATH FRO1-like protein; NADPH oxidase-like OS=... 58 5e-07 tr|Q3KTM0|Q3KTM0_ARATH FRO1-like protein OS=Arabidopsis thaliana... 58 5e-07 tr|A9S7N1|A9S7N1_PHYPA Ferric reductase-like transmembrane compo... 57 7e-07 tr|A9S0A4|A9S0A4_PHYPA Ferric reductase like transmembrane compo... 53 1e-05 tr|Q7XUW2|Q7XUW2_ORYSJ OSJNBa0027P08.6 protein OS=Oryza sativa s... 52 3e-05 tr|Q6L8G3|Q6L8G3_ORYSJ Ferric reductase OS=Oryza sativa subsp. j... 52 3e-05 tr|Q0JCX7|Q0JCX7_ORYSJ Os04g0444800 protein OS=Oryza sativa subs... 52 3e-05 tr|B8AUC6|B8AUC6_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|A9SL39|A9SL39_PHYPA Ferric reductase-like transmembrane compo... 52 3e-05 tr|A9U5F8|A9U5F8_PHYPA Ferric reductase-like transmembrane compo... 51 7e-05 tr|B8A3B5|B8A3B5_MAIZE Putative uncharacterized protein OS=Zea m... 50 1e-04 tr|B6SW74|B6SW74_MAIZE Ferric reductase-like transmembrane compo... 50 1e-04 tr|A7PCT0|A7PCT0_VITVI Chromosome chr17 scaffold_12, whole genom... 44 0.008 tr|B0CEP3|B0CEP3_ACAM1 Oxidoreductase, putative OS=Acaryochloris... 36 1.7 tr|A6LTS2|A6LTS2_CLOB8 Stage V sporulation protein D OS=Clostrid... 36 1.7 tr|Q6PYY0|Q6PYY0_OSTTA DBEII (Fragment) OS=Ostreococcus tauri GN... 35 2.9 tr|Q00YC1|Q00YC1_OSTTA DBEII (ISS) OS=Ostreococcus tauri GN=Ot12... 35 2.9 tr|B6NWY6|B6NWY6_BRAFL Putative uncharacterized protein OS=Branc... 35 2.9 tr|A7E3L0|A7E3L0_CIOIN Predicted NADPH oxidase-2 OS=Ciona intest... 35 2.9 tr|B2HS09|B2HS09_MYCMM Divalent cation-transport integral membra... 35 4.9 tr|A0PSR8|A0PSR8_MYCUA Divalent cation-transport integral membra... 35 4.9 tr|B5KGU9|B5KGU9_MALXI Ferric reductase OS=Malus xiaojinensis GN... 35 4.9 tr|A5C425|A5C425_VITVI Putative uncharacterized protein OS=Vitis... 35 4.9
>tr|A9SQS6|A9SQS6_PHYPA Ferric reductase-like transmembrane component with cytochrome b-245 motif OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_82658 PE=4 SV=1 Length = 553
Score = 66.2 bits (160), Expect = 2e-09 Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 3/198 (1%) Frame = +3
Query: 9 STKGRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTNFTRAHIVVA---SMILGT 179 +T ++ ++ A ILAS+AGF ++ GL N+Y+ RN + F+ V+ S ++G Sbjct: 374 TTSSQNLFMVAMILASVAGFVLMSGLFNLYVYTP-RNSPESPFSLTLDVLLFFISTLVGI 432
Query: 180 TIFGGVIVLAWWLXXXXXXXXXXXXXXRKVGIXXXXXXXXXXHHDQVAHQLQPIVRTHLD 359 + GG ++L W + + P+ +D Sbjct: 433 VVCGGAVLLLW----------------NPARSYIVPRSSSSRNSSTIVSATDPVKEERMD 476
Query: 360 EENIAAASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQRHT 539 E+ A T+ G RP + +IF ++ + IGVL+ G +G+Q A EC R Sbjct: 477 VESQPATLEDMCTVIKGSRPPFQEIFETAATKHDGEEIGVLICGPKGLQESAASEC-RSQ 535
Query: 540 RLFDTSNVFHYHGVSFEL 593 + FH+H V F+L Sbjct: 536 NFRNRRAQFHFHSVCFDL 553
>tr|A7R0A2|A7R0A2_VITVI Chromosome undetermined scaffold_301, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011355001 PE=4 SV=1 Length = 735
Score = 63.9 bits (154), Expect = 8e-09 Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 4/196 (2%) Frame = +3
Query: 18 GRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTN--FTRAHIVVASMILGTTIFG 191 G + W ++ + GF + L N+Y + N F N + + + V M+ IFG Sbjct: 562 GNNIWSGIYVILPVLGFVLFMDLLNIYYI----NPFGINSWWYKGLLFVLCMVASVVIFG 617
Query: 192 GVIVLAWWLXXXXXXXXXXXXXXR-KVGIXXXXXXXXXXHHDQVAHQLQPIVRTHLDEEN 368 G +V W L + K+G+ +Q I + D+E+ Sbjct: 618 GAVVGFWHLWERRISESEELEDNQMKIGM------------------VQHINGSMEDKES 659
Query: 369 IAAASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQ-RHTRL 545 + + T++ G RP + +IF ++++ + + ++GV+V G +QA VAKEC+ ++ R Sbjct: 660 SQESLAGTSTIQYGCRPDFKEIFGSISERWGHVDVGVIVCGPPTLQASVAKECRSQNIRR 719
Query: 546 FDTSNVFHYHGVSFEL 593 +FH++ SF+L Sbjct: 720 RCHDPIFHFNSHSFDL 735
>tr|Q2HST1|Q2HST1_MEDTR Ferric reductase-like transmembrane component OS=Medicago truncatula GN=MtrDRAFT_AC151000g1v2 PE=4 SV=1 Length = 740
Score = 63.2 bits (152), Expect = 1e-08 Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 1/193 (0%) Frame = +3
Query: 18 GRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTNFTRAHIVVASMILGTTIFGGV 197 G + W +++S GF IL L N+Y + + + + ++V M+ IFGG+ Sbjct: 570 GNNFWSGLYVISSTLGFVILLALLNIYYINPV--GVVIWWYKGLLLVVCMVASVVIFGGI 627
Query: 198 IVLAWWLXXXXXXXXXXXXXXRKVGIXXXXXXXXXXHHDQVAHQLQPIVRTHLDEENIAA 377 +V W + + + H D L + NIA Sbjct: 628 VVGFWNMWEKQSSLKDKS---NNIKVDKIEQNGSVDHKD-------------LTQYNIAK 671
Query: 378 ASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQRHTRLFDTS 557 + T+R G RP + +IF ++++++ + ++G+LV G +Q+ VA+E + H+ Sbjct: 672 LT----TIRYGSRPDFKEIFESMSEKWGHVDVGILVCGPPTLQSSVAQEIRSHSLTRQPY 727
Query: 558 N-VFHYHGVSFEL 593 + +FH+H SF+L Sbjct: 728 HPIFHFHSHSFDL 740
>tr|A9RKK9|A9RKK9_PHYPA Ferric reductase like transmembrane component OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115851 PE=4 SV=1 Length = 666
Score = 61.2 bits (147), Expect = 5e-08 Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 1/67 (1%) Frame = +3
Query: 396 TLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQRH-TRLFDTSNVFHY 572 TLR G RP+ S++ +A+ + Y N+N+GVL SG E +Q DVA C+ H + + T+ + +Y Sbjct: 601 TLRKG-RPILSEVLDAVLERYTNENVGVLASGPESLQRDVANMCRNHSSNNYATAQILNY 659
Query: 573 HGVSFEL 593 H VSF L Sbjct: 660 HSVSFRL 666
>tr|Q9LTA0|Q9LTA0_ARATH FRO2-like protein; NADPH oxidase-like OS=Arabidopsis thaliana PE=4 SV=1 Length = 721
Score = 60.5 bits (145), Expect = 8e-08 Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 2/194 (1%) Frame = +3
Query: 18 GRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTNFTRAHIVVASMILGTTIFGGV 197 G + W ++ S GF + L +++ +K R + T + + + V M+ IFGG+ Sbjct: 546 GDNIWSGLYLIISTIGFISMITLLDIFYIK--RYNITTWWYKGLLFVGCMVASVLIFGGL 603
Query: 198 IVLAWWLXXXXXXXXXXXXXXRKVGIXXXXXXXXXXHHDQVAHQLQPIVRTHLDEENIAA 377 +V+ +W KV + H+ A +L+ + D +N Sbjct: 604 VVV-FWHRWEHKTGEVEANGNDKVDLNGEET------HNPSAAELKGLAIEE-DVQNYT- 654
Query: 378 ASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQRHTRLFDTS 557 T+R G RP + +IF +LN ++ + ++GV+V G +Q VAKE + H+ ++ ++ Sbjct: 655 ------TIRYGTRPAFREIFESLNGKWGSVDVGVIVCGPATLQTTVAKEIRSHS-IWRSA 707
Query: 558 N--VFHYHGVSFEL 593 N +FH++ SF+L Sbjct: 708 NHPLFHFNSHSFDL 721
>tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidopsis thaliana GN=At5g49730 PE=2 SV=1 Length = 738
Score = 60.5 bits (145), Expect = 8e-08 Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 2/194 (1%) Frame = +3
Query: 18 GRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTNFTRAHIVVASMILGTTIFGGV 197 G + W ++ S GF + L +++ +K R + T + + + V M+ IFGG+ Sbjct: 563 GDNIWSGLYLIISTIGFISMITLLDIFYIK--RYNITTWWYKGLLFVGCMVASVLIFGGL 620
Query: 198 IVLAWWLXXXXXXXXXXXXXXRKVGIXXXXXXXXXXHHDQVAHQLQPIVRTHLDEENIAA 377 +V+ +W KV + H+ A +L+ + D +N Sbjct: 621 VVV-FWHRWEHKTGEVEANGNDKVDLNGEET------HNPSAAELKGLAIEE-DVQNYT- 671
Query: 378 ASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQRHTRLFDTS 557 T+R G RP + +IF +LN ++ + ++GV+V G +Q VAKE + H+ ++ ++ Sbjct: 672 ------TIRYGTRPAFREIFESLNGKWGSVDVGVIVCGPATLQTTVAKEIRSHS-IWRSA 724
Query: 558 N--VFHYHGVSFEL 593 N +FH++ SF+L Sbjct: 725 NHPLFHFNSHSFDL 738
>tr|Q0WLX7|Q0WLX7_ARATH FRO2-like protein (Fragment) OS=Arabidopsis thaliana GN=At5g49730 PE=2 SV=1 Length = 479
Score = 60.5 bits (145), Expect = 8e-08 Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 2/194 (1%) Frame = +3
Query: 18 GRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTNFTRAHIVVASMILGTTIFGGV 197 G + W ++ S GF + L +++ +K R + T + + + V M+ IFGG+ Sbjct: 304 GDNIWSGLYLIISTIGFISMITLLDIFYIK--RYNITTWWYKGLLFVGCMVASVLIFGGL 361
Query: 198 IVLAWWLXXXXXXXXXXXXXXRKVGIXXXXXXXXXXHHDQVAHQLQPIVRTHLDEENIAA 377 +V+ +W KV + H+ A +L+ + D +N Sbjct: 362 VVV-FWHRWEHKTGEVEANGNDKVDLNGEET------HNPSAAELKGLAIEE-DVQNYT- 412
Query: 378 ASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQRHTRLFDTS 557 T+R G RP + +IF +LN ++ + ++GV+V G +Q VAKE + H+ ++ ++ Sbjct: 413 ------TIRYGTRPAFREIFESLNGKWGSVDVGVIVCGPATLQTTVAKEIRSHS-IWRSA 465
Query: 558 N--VFHYHGVSFEL 593 N +FH++ SF+L Sbjct: 466 NHPLFHFNSHSFDL 479
>tr|Q9LT99|Q9LT99_ARATH FRO1-like protein; NADPH oxidase-like OS=Arabidopsis thaliana PE=4 SV=1 Length = 739
Score = 57.8 bits (138), Expect = 5e-07 Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 2/194 (1%) Frame = +3
Query: 18 GRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTNFTRAHIVVASMILGTTIFGGV 197 G + W ++ S GF + L +++ + + + T + + + V M+ IFGG+ Sbjct: 564 GDNIWSGLYLIISTIGFIAMITLVDIFYIN--KYNITTWWYKGLLFVVCMVASVLIFGGL 621
Query: 198 IVLAWWLXXXXXXXXXXXXXXRKVGIXXXXXXXXXXHHDQVAHQLQPIVRTHLDEENIAA 377 +V+ +W KV + H+ A +L+ + D +N Sbjct: 622 VVV-FWHRWEHKTGEVEANGNDKVDLNGEET------HNPSAAELKGLAIEE-DVQNYT- 672
Query: 378 ASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQRHTRLFDTS 557 T+R G RP + +IF +LN ++ + ++GV+V G +Q VAKE + H+ ++ ++ Sbjct: 673 ------TIRYGTRPAFREIFESLNGKWGSVDVGVIVCGPATLQTTVAKEIRSHS-IWRSA 725
Query: 558 N--VFHYHGVSFEL 593 N +FH++ SF+L Sbjct: 726 NHPLFHFNSHSFDL 739
>tr|Q3KTM0|Q3KTM0_ARATH FRO1-like protein OS=Arabidopsis thaliana GN=At5g49740 PE=2 SV=1 Length = 747
Score = 57.8 bits (138), Expect = 5e-07 Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 2/194 (1%) Frame = +3
Query: 18 GRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTNFTRAHIVVASMILGTTIFGGV 197 G + W ++ S GF + L +++ + + + T + + + V M+ IFGG+ Sbjct: 572 GDNIWSGLYLIISTIGFIAMITLVDIFYIN--KYNITTWWYKGLLFVVCMVASVLIFGGL 629
Query: 198 IVLAWWLXXXXXXXXXXXXXXRKVGIXXXXXXXXXXHHDQVAHQLQPIVRTHLDEENIAA 377 +V+ +W KV + H+ A +L+ + D +N Sbjct: 630 VVV-FWHRWEHKTGEVEANGNDKVDLNGEET------HNPSAAELKGLAIEE-DVQNYT- 680
Query: 378 ASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQRHTRLFDTS 557 T+R G RP + +IF +LN ++ + ++GV+V G +Q VAKE + H+ ++ ++ Sbjct: 681 ------TIRYGTRPAFREIFESLNGKWGSVDVGVIVCGPATLQTTVAKEIRSHS-IWRSA 733
Query: 558 N--VFHYHGVSFEL 593 N +FH++ SF+L Sbjct: 734 NHPLFHFNSHSFDL 747
>tr|A9S7N1|A9S7N1_PHYPA Ferric reductase-like transmembrane component OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163308 PE=4 SV=1 Length = 801
Score = 57.4 bits (137), Expect = 7e-07 Identities = 51/200 (25%), Positives = 77/200 (38%), Gaps = 3/200 (1%) Frame = +3
Query: 3 SVSTKGRSSWVAATILASMAGFYILWGLSNVYIVKHLRNDFPTNFTRAH---IVVASMIL 173 SV + W+ A I ASM GF ++ GL Y+ +F+ A + S+ + Sbjct: 629 SVINSYHNLWMIALICASMTGFVLMSGLFYTYVSAQRLQPKGHHFSTAVESILYFISLFV 688
Query: 174 GTTIFGGVIVLAWWLXXXXXXXXXXXXXXRKVGIXXXXXXXXXXHHDQVAHQLQPIVRTH 353 G I GG ++ W + H Q + + T Sbjct: 689 GIVICGGTVIFFW---------------ISSLSESGSGASAIANGHGQDIEENDDV--TL 731
Query: 354 LDEENIAAASPWSGTLRLGVRPLWSDIFNALNKEYHNQNIGVLVSGSEGMQADVAKECQR 533 LD I S RP + DIF + +++ +++GVLV G E +Q VA C+ Sbjct: 732 LDNCIITEGS----------RPQFQDIFKEVAEKHDGEDVGVLVCGPESLQESVAAACRS 781
Query: 534 HTRLFDTSNVFHYHGVSFEL 593 FHYH VSF+L Sbjct: 782 RNFGNLMRTPFHYHSVSFDL 801
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