DK962290
Clone id TST39A01NGRL0013_H15
Library
Length 645
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_H15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
GTCAACTTCTGATCCACCTGCAGGAGAGGCAAGCAGTGTAGCAGCAGCAACGTCAGTGGC
GCCTTCTGCTGACCCCCCTTCTTCATCATCCTCCAAGCGGAGATGGAGCCCCTGCACATG
GCGTTATGCTATCGAGGAGGTCCAACCAGAGCTCGGATCACGGCCCCGCAACAGCAGCAA
CAACAACCCTCCCTACTCTTCATCGTCTCTGCGCTCTGCTGGTGCAAACGCAGAACATGC
CCCTCCTCATACCACAAGTAAGTCTCGCCCCCTCCACACCCAGGATCATGCATACGGCAA
AGAGAGTGACGACCCCTTTCGTCGTAACACTCACAGTAACCGAACATGGGGTGGCGCAGA
GCTCTCTGAGCTTCGTGCTCGACATGCGCAACCCCGCTCTCAAGACATGCTGAGCAAGAA
GAAGCGCCCACGCCCACCTCATCCGCAGCAGGCATATCAACCGCATCAGCAGAAGAAGCC
TGCAAGGAGGCCTAGAGAGCAAGAAGAGGATGAAGATGAAGATGAGGAGTGGGACAATGA
GGATGACGATGGTGATGATGCAGAGCTAGGGCACCATTTTGAGGAAAGTAGGAAGAAGAA
GAGAGAAATGAGCCCTAGTGAGCTCTATTACTGTGAGGTATGTAG
■■Homology search results ■■ -
sp_hit_id P37677
Definition sp|P37677|LYXK_ECOLI L-xylulose/3-keto-L-gulonate kinase OS=Escherichia coli (strain K12)
Align length 39
Score (bit) 33.9
E-value 0.74
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962290|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_H15, 5'
(645 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P37677|LYXK_ECOLI L-xylulose/3-keto-L-gulonate kinase OS=Esch... 34 0.74
sp|Q5BEN5|STU1_EMENI Protein stu1 OS=Emericella nidulans GN=stu1... 32 2.2
sp|Q28C44|C19L2_XENTR CWF19-like protein 2 OS=Xenopus tropicalis... 31 6.3

>sp|P37677|LYXK_ECOLI L-xylulose/3-keto-L-gulonate kinase
OS=Escherichia coli (strain K12) GN=lyx PE=1 SV=1
Length = 498

Score = 33.9 bits (76), Expect = 0.74
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2

Query: 461 VDMPAADEVGVGASSCSACLESGVAHVEHEAQRALRHPM 345
+++P +E G ++ +A + +GV H EAQR LRHP+
Sbjct: 421 IELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPV 459


>sp|Q5BEN5|STU1_EMENI Protein stu1 OS=Emericella nidulans GN=stu1
PE=3 SV=2
Length = 1261

Score = 32.3 bits (72), Expect = 2.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2

Query: 428 GASSCSACLESGVAHVEHEAQRALRHPMFGYCECYDERGRHSL 300
G +S +AC++ GV + + +RA RH F + + R + L
Sbjct: 583 GVNSIAACIQEGVEDAKEDIRRAYRHTFFRFSSVWPARAKKIL 625


>sp|Q28C44|C19L2_XENTR CWF19-like protein 2 OS=Xenopus tropicalis
GN=cwf19l2 PE=2 SV=1
Length = 922

Score = 30.8 bits (68), Expect = 6.3
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2

Query: 248 HTTSKSRPLHTQDHAYGKESDDPFRRNTHSNRTWGGAELSELRARHAQPRSQD 406
HT SRP HT + Y K S + HS + + E R + + R+QD
Sbjct: 303 HTDDNSRPRHTDHNRYNKYSHKESQEYKHSEESSRYRKEPEHRRQSFEDRNQD 355


tr_hit_id B0XEH8
Definition tr|B0XEH8|B0XEH8_CULQU Adamts-7 OS=Culex quinquefasciatus
Align length 111
Score (bit) 34.3
E-value 6.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK962290|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_H15, 5'
(645 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0XEH8|B0XEH8_CULQU Adamts-7 OS=Culex quinquefasciatus GN=Cpi... 34 6.7
tr|B6HCF6|B6HCF6_PENCH Pc18g01560 protein OS=Penicillium chrysog... 34 6.7
tr|A6S1Q0|A6S1Q0_BOTFB Putative uncharacterized protein OS=Botry... 34 6.7
tr|B1X8J6|B1X8J6_ECODH L-xylulose kinase OS=Escherichia coli (st... 34 8.8
tr|B1IZL3|B1IZL3_ECOLC Carbohydrate kinase FGGY OS=Escherichia c... 34 8.8
tr|A8A639|A8A639_ECOHS Cryptic L-xylulose kinase OS=Escherichia ... 34 8.8
tr|B3X823|B3X823_ECOLX Cryptic L-xylulose kinase OS=Escherichia ... 34 8.8
tr|B2N784|B2N784_ECOLX Cryptic L-xylulose kinase OS=Escherichia ... 34 8.8

>tr|B0XEH8|B0XEH8_CULQU Adamts-7 OS=Culex quinquefasciatus
GN=CpipJ_CPIJ017668 PE=4 SV=1
Length = 297

Score = 34.3 bits (77), Expect = 6.7
Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 21/111 (18%)
Frame = -2

Query: 467 DAVDMPAADEVGVGA----SSCSACLESGVAHVEHEAQRALRHPMFGYCECYDERGRHSL 300
D D+PA + G G S CS +GVA E P G C ER R+
Sbjct: 186 DVEDLPAPVDGGWGGWSAWSECSRSCGAGVARQTRECDHP--SPAHGGLFCTGERARYKT 243

Query: 299 CRM-----------------HDPGCGGGETYLWYEEGHVLRLHQQSAETMK 198
C HD G+TY W ++L+ +SA++ K
Sbjct: 244 CNTQPCPPEMASFRAQQCSEHDNQTIKGQTYTWLPYFDKIKLYPKSAKSDK 294


>tr|B6HCF6|B6HCF6_PENCH Pc18g01560 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc18g01560 PE=4 SV=1
Length = 1644

Score = 34.3 bits (77), Expect = 6.7
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +2

Query: 245 PHTTSKSRPLHTQDHAYGKESDDPFRRNTHSNRTWGGAELSELRARHAQPRSQD 406
P T+K L Q HA+ +E DP R W ++LSELR R QP+ +
Sbjct: 139 PVDTAKPSLLQPQSHAHAREDPDPSR--------WSSSQLSELRPRE-QPKDPE 183


>tr|A6S1Q0|A6S1Q0_BOTFB Putative uncharacterized protein
OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_06359
PE=4 SV=1
Length = 450

Score = 34.3 bits (77), Expect = 6.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -2

Query: 476 SSADAVDMPAADEV--GVGASSCSACLESGVAHVEHEAQRALRHPMFGYCECYDERGRHS 303
S+ VDMP AD+V G+G A + SGVAHV E Q A M + D+ +
Sbjct: 69 SANQIVDMPPADDVDDGLGDLDIDAIIASGVAHVSAEYQDAGTMEMNDHTSHQDQSHEAN 128

Query: 302 LCRMHDP 282
+ + P
Sbjct: 129 ISTLSPP 135


>tr|B1X8J6|B1X8J6_ECODH L-xylulose kinase OS=Escherichia coli
(strain DH10B) GN=lyxK PE=4 SV=1
Length = 498

Score = 33.9 bits (76), Expect = 8.8
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2

Query: 461 VDMPAADEVGVGASSCSACLESGVAHVEHEAQRALRHPM 345
+++P +E G ++ +A + +GV H EAQR LRHP+
Sbjct: 421 IELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPV 459


>tr|B1IZL3|B1IZL3_ECOLC Carbohydrate kinase FGGY OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=EcolC_0134
PE=3 SV=1
Length = 498

Score = 33.9 bits (76), Expect = 8.8
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2

Query: 461 VDMPAADEVGVGASSCSACLESGVAHVEHEAQRALRHPM 345
+++P +E G ++ +A + +GV H EAQR LRHP+
Sbjct: 421 IELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPV 459


>tr|A8A639|A8A639_ECOHS Cryptic L-xylulose kinase OS=Escherichia
coli O9:H4 (strain HS) GN=lyx PE=3 SV=1
Length = 498

Score = 33.9 bits (76), Expect = 8.8
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2

Query: 461 VDMPAADEVGVGASSCSACLESGVAHVEHEAQRALRHPM 345
+++P +E G ++ +A + +GV H EAQR LRHP+
Sbjct: 421 IELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPV 459


>tr|B3X823|B3X823_ECOLX Cryptic L-xylulose kinase OS=Escherichia
coli 101-1 GN=lyx PE=4 SV=1
Length = 498

Score = 33.9 bits (76), Expect = 8.8
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2

Query: 461 VDMPAADEVGVGASSCSACLESGVAHVEHEAQRALRHPM 345
+++P +E G ++ +A + +GV H EAQR LRHP+
Sbjct: 421 IELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPV 459


>tr|B2N784|B2N784_ECOLX Cryptic L-xylulose kinase OS=Escherichia
coli 53638 GN=lyx PE=4 SV=1
Length = 498

Score = 33.9 bits (76), Expect = 8.8
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -2

Query: 461 VDMPAADEVGVGASSCSACLESGVAHVEHEAQRALRHPM 345
+++P +E G ++ +A + +GV H EAQR LRHP+
Sbjct: 421 IELPQVEETGCFGAALAARVGTGVYHNFSEAQRDLRHPV 459