DK962210 |
Clone id |
TST39A01NGRL0013_E01 |
Library |
TST39 |
Length |
582 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_E01. 5' end sequence. |
Accession |
DK962210 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CACACACACACGCACACATACATGGGCCGGGGAAGCCAGGAGAAGCTTCTTAACCAGATT TTCCAGCTCAAATTTACATCCAAAGGACTAGTTCGGCAGGCCAAGAAATGCGAGCAAGAT GAAAAAACAGAGAAGGTGAAGGTGAAGAAAGCCATCGAGCAGGGCAACATGGATGGAGCA AGGGTGTATGCGCAGAATGCCATCCGCAAGCACAACGAGCAGCTCAACTATCTGCGGCTG GCGTCACGCTTGGATGCGGTGGTGGCACGCCTTGACACCCAGGGCAAGATGCAAACCATA AGTAAATCCATGTCAGGCATTGTCAAGGCACTTGACGATGCACTTGCTGTGGGCAACATG CAGAAGATATCACAGACAATGGACTTGTTCGAGAAAACCTTTGCGAAAATCGAGGTGCAA TCGCAGTTTGTCGAGAGTGCAATGGCAGGGAGCACGTCGCTGTCGACGCCAGAGGATGAG GTTGGCTCGCTAATGCAGCAAGTTGCGGACAATCACGGGCTCGAGGTATCTGCAGGCTTA CCATTTTGCCATGACGCAAGGTGGTCAGTACCGCTGCCGAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7LBR1 |
Definition |
sp|Q7LBR1|CHM1B_HUMAN Charged multivesicular body protein 1b OS=Homo sapiens |
Align length |
162 |
Score (bit) |
165.0 |
E-value |
1.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RGJ4 |
Definition |
tr|A9RGJ4|A9RGJ4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
171 |
Score (bit) |
282.0 |
E-value |
1.0e-74 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962210|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_E01, 5' (582 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RGJ4|A9RGJ4_PHYPA Predicted protein OS=Physcomitrella paten... 282 1e-74 tr|A9S101|A9S101_PHYPA Predicted protein OS=Physcomitrella paten... 277 4e-73 tr|A9U0T0|A9U0T0_PHYPA Predicted protein OS=Physcomitrella paten... 275 2e-72 tr|A9SDD0|A9SDD0_PHYPA Predicted protein OS=Physcomitrella paten... 272 9e-72 tr|A9NMS6|A9NMS6_PICSI Putative uncharacterized protein OS=Picea... 259 8e-68 tr|Q84U01|Q84U01_NICBE Putative developmental protein OS=Nicotia... 253 4e-66 tr|Q9SSM4|Q9SSM4_ARATH Highly similar to developmental protein D... 253 6e-66 tr|Q8LFG3|Q8LFG3_ARATH Developmental protein, putative OS=Arabid... 253 7e-66 tr|B6T9W6|B6T9W6_MAIZE Charged multivesicular body protein 1b OS... 252 1e-65 tr|A5BP92|A5BP92_VITVI Putative uncharacterized protein (Chromos... 252 1e-65 tr|B7FHV8|B7FHV8_MEDTR Putative uncharacterized protein OS=Medic... 251 2e-65 tr|Q84LS4|Q84LS4_MAIZE Superal1 OS=Zea mays GN=Sal1 PE=2 SV=1 251 3e-65 tr|Q9FZ60|Q9FZ60_ARATH F11A6.7 protein OS=Arabidopsis thaliana G... 250 4e-65 tr|Q8LE58|Q8LE58_ARATH Developmental protein, putative (Putative... 250 4e-65 tr|Q84VG1|Q84VG1_ORYSJ Os06g0643300 protein OS=Oryza sativa subs... 250 5e-65 tr|A2YFI5|A2YFI5_ORYSI Putative uncharacterized protein OS=Oryza... 250 5e-65 tr|B6C9J4|B6C9J4_HORVD SAL1 OS=Hordeum vulgare var. distichum GN... 246 7e-64 tr|B0BKB1|B0BKB1_HORVD Superal1 (Fragment) OS=Hordeum vulgare va... 242 1e-62 tr|B0BKB0|B0BKB0_HORVU Superal1 (Fragment) OS=Hordeum vulgare GN... 241 3e-62 tr|A8IRR6|A8IRR6_CHLRE Subunit of the ESCRT-III complex OS=Chlam... 214 3e-54 tr|A4RS18|A4RS18_OSTLU Predicted protein OS=Ostreococcus lucimar... 207 3e-52 tr|O96552|O96552_DICDI Developmental protein DG1118 (SNF7 family... 189 1e-46 tr|A6N179|A6N179_ORYSI Charged multivesicular body protein 1b (F... 187 3e-46 tr|Q5KP19|Q5KP19_CRYNE Protein-vacuolar targeting-related protei... 179 1e-43 tr|B3RJD6|B3RJD6_TRIAD Putative uncharacterized protein OS=Trich... 178 2e-43 tr|Q55ZQ7|Q55ZQ7_CRYNE Putative uncharacterized protein OS=Crypt... 176 9e-43 tr|A7S5F7|A7S5F7_NEMVE Predicted protein (Fragment) OS=Nematoste... 173 6e-42 tr|B6P9J8|B6P9J8_BRAFL Putative uncharacterized protein OS=Branc... 172 9e-42 tr|A4IBY0|A4IBY0_LEIIN Putative uncharacterized protein OS=Leish... 172 1e-41 tr|A4HNA9|A4HNA9_LEIBR Putative uncharacterized protein OS=Leish... 172 1e-41
>tr|A9RGJ4|A9RGJ4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_174639 PE=4 SV=1 Length = 204
Score = 282 bits (721), Expect = 1e-74 Identities = 145/171 (84%), Positives = 157/171 (91%) Frame = +1
Query: 31 GSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAIRK 210 GSQEKLLNQIFQLKFT+K LVRQAKKCE +EK EK+KVKKAIE+GNMDGAR+YAQNAIRK Sbjct: 3 GSQEKLLNQIFQLKFTAKTLVRQAKKCESEEKAEKLKVKKAIEKGNMDGARIYAQNAIRK 62
Query: 211 HNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMDLF 390 HNEQLNYLRLASRLDAVV+RL TQ KMQTI+KSM IVKALD ALAVGNM+KISQTMD F Sbjct: 63 HNEQLNYLRLASRLDAVVSRLGTQSKMQTITKSMGSIVKALDSALAVGNMEKISQTMDQF 122
Query: 391 EKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 EKTF +EVQS+FVESAMAGSTSLSTPEDEV SLM QVAD++GLEVS GLP Sbjct: 123 EKTFVNMEVQSEFVESAMAGSTSLSTPEDEVNSLMHQVADDYGLEVSVGLP 173
>tr|A9S101|A9S101_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_207621 PE=4 SV=1 Length = 207
Score = 277 bits (708), Expect = 4e-73 Identities = 140/173 (80%), Positives = 159/173 (91%) Frame = +1
Query: 25 GRGSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAI 204 GR SQ+KL++QIFQLKFTSK LVR AKKCE++EK EK+KVKKAIE+GNMDGAR+YAQNAI Sbjct: 3 GRSSQDKLMDQIFQLKFTSKSLVRAAKKCEKEEKGEKLKVKKAIEKGNMDGARIYAQNAI 62
Query: 205 RKHNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMD 384 RKHNEQLNYLRL+SRLDAVVARL TQ KMQTISKSM+GIVK+LD ALAVGNM+KISQTMD Sbjct: 63 RKHNEQLNYLRLSSRLDAVVARLGTQSKMQTISKSMAGIVKSLDSALAVGNMEKISQTMD 122
Query: 385 LFEKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 FEKTF +EVQS+F+E+AMAGSTSLSTPEDEV SL+ QVAD++GLEVS LP Sbjct: 123 QFEKTFVNMEVQSEFIETAMAGSTSLSTPEDEVNSLLHQVADDYGLEVSVNLP 175
>tr|A9U0T0|A9U0T0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227297 PE=4 SV=1 Length = 206
Score = 275 bits (702), Expect = 2e-72 Identities = 139/174 (79%), Positives = 159/174 (91%) Frame = +1
Query: 22 MGRGSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNA 201 MG G+QEKLL+QIFQLKFTSK LVR+AKKCE+DEK EK+KVKKA+E+ NMDGAR+YAQNA Sbjct: 1 MGGGAQEKLLDQIFQLKFTSKSLVREAKKCEKDEKAEKLKVKKAMEKNNMDGARIYAQNA 60
Query: 202 IRKHNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTM 381 IRKHNE LNYLRL+SRLDAVVA+L+TQ KMQTISKSM IVKALD +LAVGNM+KISQTM Sbjct: 61 IRKHNEHLNYLRLSSRLDAVVAQLNTQSKMQTISKSMGSIVKALDSSLAVGNMEKISQTM 120
Query: 382 DLFEKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 D FEKTF +EVQ++FVE+AMAGSTSLSTPEDEV SL+ QVAD++GLEVS GLP Sbjct: 121 DQFEKTFVNMEVQAEFVENAMAGSTSLSTPEDEVNSLINQVADDYGLEVSLGLP 174
>tr|A9SDD0|A9SDD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_127804 PE=4 SV=1 Length = 207
Score = 272 bits (696), Expect = 9e-72 Identities = 135/173 (78%), Positives = 159/173 (91%) Frame = +1
Query: 25 GRGSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAI 204 GR Q+KL++QIFQLKFTSK LVR AKKCE+DEK+EK+KVKKAIE+GNMDGAR+YAQNAI Sbjct: 3 GRSGQDKLMDQIFQLKFTSKSLVRAAKKCEKDEKSEKLKVKKAIEKGNMDGARIYAQNAI 62
Query: 205 RKHNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMD 384 RKHNEQLNYLRL+SRLDAVVA+L TQ K+QT++KSM+GIVK+LD ALAVGNM+KISQTMD Sbjct: 63 RKHNEQLNYLRLSSRLDAVVAQLGTQSKLQTVAKSMAGIVKSLDSALAVGNMEKISQTMD 122
Query: 385 LFEKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 FEKTF +EVQS+F+E+AMAGSTSLSTPED+V SL+ QVAD++GLEVS LP Sbjct: 123 QFEKTFMNMEVQSEFIETAMAGSTSLSTPEDDVNSLLHQVADDYGLEVSVNLP 175
>tr|A9NMS6|A9NMS6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 203
Score = 259 bits (662), Expect = 8e-68 Identities = 129/171 (75%), Positives = 152/171 (88%) Frame = +1
Query: 31 GSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAIRK 210 GS EKL+NQI LK TSK L RQ++KCE++EK EK+KVKKAIE+GNMDGAR+YA+N+IRK Sbjct: 3 GSAEKLMNQIMDLKITSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENSIRK 62
Query: 211 HNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMDLF 390 HNEQLNY+RLASRLDAVV+RLDTQ KM TI+KSM+ IVKALD ALA GN+QK+S+TMD F Sbjct: 63 HNEQLNYMRLASRLDAVVSRLDTQAKMMTINKSMTSIVKALDSALATGNLQKMSETMDQF 122
Query: 391 EKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 E F +EVQSQFVE+AMAGSTSLSTPED+V +LMQQVAD++GLEVS GLP Sbjct: 123 ETQFVNMEVQSQFVENAMAGSTSLSTPEDQVNTLMQQVADDYGLEVSVGLP 173
>tr|Q84U01|Q84U01_NICBE Putative developmental protein OS=Nicotiana benthamiana PE=2 SV=1 Length = 203
Score = 253 bits (647), Expect = 4e-66 Identities = 125/171 (73%), Positives = 153/171 (89%) Frame = +1
Query: 31 GSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAIRK 210 G+ EKL+NQI +LKFTSK L RQA+KCE+DEK+EK+KVKKAIE+GNMDGAR+YA+NAIRK Sbjct: 2 GNTEKLMNQIMELKFTSKSLQRQARKCEKDEKSEKLKVKKAIEKGNMDGARIYAENAIRK 61
Query: 211 HNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMDLF 390 +EQ+NYLRL+SRLDAVVARLDTQ KM TISKSM IVK+L+ +LA GN+QK+S+TMD F Sbjct: 62 RSEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGNLQKMSETMDKF 121
Query: 391 EKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 E+ F +EVQ++F+ES+MAGSTSLSTPED+V SLM QVAD++GLEVS GLP Sbjct: 122 EQQFVNMEVQAEFMESSMAGSTSLSTPEDQVNSLMHQVADDYGLEVSVGLP 172
>tr|Q9SSM4|Q9SSM4_ARATH Highly similar to developmental protein DG1118 (Similar to developmental protein DG1118) OS=Arabidopsis thaliana GN=At1g73030/F3N23.23 PE=2 SV=1 Length = 203
Score = 253 bits (646), Expect = 6e-66 Identities = 125/171 (73%), Positives = 153/171 (89%) Frame = +1
Query: 31 GSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAIRK 210 G+ +KL+NQIF LKFTSK L RQ++KCE++EK EK+KVKKAIE+GNMDGAR+YA+NAIRK Sbjct: 2 GNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRK 61
Query: 211 HNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMDLF 390 +EQ+NYLRLASRLDAVVARLDTQ KM TI+KSM+ IVK+L+ +LA GN+QK+S+TMD F Sbjct: 62 RSEQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSF 121
Query: 391 EKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 EK F +EVQ++F+E+AMAGSTSLSTPE EV SLMQQVAD++GLEVS GLP Sbjct: 122 EKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLP 172
>tr|Q8LFG3|Q8LFG3_ARATH Developmental protein, putative OS=Arabidopsis thaliana PE=2 SV=1 Length = 203
Score = 253 bits (645), Expect = 7e-66 Identities = 125/171 (73%), Positives = 152/171 (88%) Frame = +1
Query: 31 GSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAIRK 210 G+ +KL+NQIF LKFTSK L RQ++KCE++EK EK+KVKKAIE+GNMDGAR+YA+NAIRK Sbjct: 2 GNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRK 61
Query: 211 HNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMDLF 390 EQ+NYLRLASRLDAVVARLDTQ KM TI+KSM+ IVK+L+ +LA GN+QK+S+TMD F Sbjct: 62 RREQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSF 121
Query: 391 EKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 EK F +EVQ++F+E+AMAGSTSLSTPE EV SLMQQVAD++GLEVS GLP Sbjct: 122 EKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLP 172
>tr|B6T9W6|B6T9W6_MAIZE Charged multivesicular body protein 1b OS=Zea mays PE=2 SV=1 Length = 204
Score = 252 bits (643), Expect = 1e-65 Identities = 126/171 (73%), Positives = 148/171 (86%) Frame = +1
Query: 31 GSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAIRK 210 G+ EKL+NQIF LKFTSK L RQA+KCE++EK +K+KVKKAIE+GNMDGAR+YA+NAIRK Sbjct: 2 GNPEKLMNQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIRK 61
Query: 211 HNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMDLF 390 E +NYLRLASRLDAVVARLDTQ KMQ I KSM IVK+LD ALA GN+QK+S+TMD F Sbjct: 62 RTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMQSIVKSLDSALATGNLQKMSETMDNF 121
Query: 391 EKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 E+ F +EVQ++F+E AMAGSTSLSTPE EV SLMQQVAD++GLEVS GLP Sbjct: 122 ERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLP 172
>tr|A5BP92|A5BP92_VITVI Putative uncharacterized protein (Chromosome chr9 scaffold_7, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00034212001 PE=4 SV=1 Length = 202
Score = 252 bits (643), Expect = 1e-65 Identities = 126/171 (73%), Positives = 150/171 (87%) Frame = +1
Query: 31 GSQEKLLNQIFQLKFTSKGLVRQAKKCEQDEKTEKVKVKKAIEQGNMDGARVYAQNAIRK 210 G+ EKL+NQI +LKFTSK L RQA+KCE++EK EK+KVKKAIE+GNMDGAR+YA+NAIRK Sbjct: 2 GNTEKLMNQIMELKFTSKSLQRQARKCEKEEKGEKLKVKKAIEKGNMDGARIYAENAIRK 61
Query: 211 HNEQLNYLRLASRLDAVVARLDTQGKMQTISKSMSGIVKALDDALAVGNMQKISQTMDLF 390 EQ+NYLRL+SRLDAVVARLDTQ KM TISKSM IVK+L+ LA GN+QK+S+TMD F Sbjct: 62 RTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGSIVKSLESTLATGNLQKMSETMDQF 121
Query: 391 EKTFAKIEVQSQFVESAMAGSTSLSTPEDEVGSLMQQVADNHGLEVSAGLP 543 EK F +EVQ++F+ES+MAGSTSLSTPE EV SLMQQVAD++GLEVS GLP Sbjct: 122 EKQFVNMEVQAEFMESSMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLP 172
|