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NBDC - LSDB Archive
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DK962206
Clone id TST39A01NGRL0013_D21
Library
Length 633
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_D21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTACTCTTTCACCACGCCTGCACAGAGAGCTCCAGAGGGTCAGTGGGATCATGATTTGTA
TGAGGAAGGTGCAAGTGTGGCTCCTTTGCGACCAAATACAGGAATTGAGACAGGCACTAA
GCTTTTTATATCCAACTTGGATTTTGGGGTATCAAATGAAGATATTAAGGAGCTTTTTTC
AGAAATTGGTGACATCAAGCGGAGCACTGTTCATTACGACAGGAGTGGCCGCTCAAAGGG
CACCGCAGAAGTTGTTTATTCAAGAAGAGCTGATGCTGTAGCAGCCTCGAAAAGGTACAA
TAACGTGCAGCTTGATGGCAAACCAATGAAAATAGAAATTGTTGGAACAAATCTAGCAAT
ACCTGCACCTCCTGTTCGAGTTGCAAATGGAGCCGCTTCCATCGGAAGAGGAGCGCAAGT
GACAAAAGAGACGTCTACACGTGGTCGTGGTGGCTCCTCTAGGAGAGGTCGAGGTGGAAG
TGGAAGAGGACGTGGAGGCAGAGGATCAGACAAGTCTGCAGCTGATTTAGATGCTGAGCT
AGACGATTACCATGCTGAGGCTATGCAAATTTCTTAATTACTGTCTAGAGGATGGCAATT
CTAAACATGTGAAGGATGGTGTGTGAAGGGCCT
■■Homology search results ■■ -
sp_hit_id Q86V81
Definition sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens
Align length 180
Score (bit) 125.0
E-value 1.0e-28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962206|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_D21, 5'
         (633 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens GN=T...   125   1e-28
sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus GN=T...   123   9e-28
sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2 OS...   119   1e-26
sp|Q09330|MLO3_SCHPO mRNA export protein mlo3 OS=Schizosaccharom...    68   4e-11
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    66   1e-10
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    62   2e-09
sp|Q8BG81|PDIP3_MOUSE Polymerase delta-interacting protein 3 OS=...    62   2e-09
sp|Q9BY77|PDIP3_HUMAN Polymerase delta-interacting protein 3 OS=...    61   5e-09
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    58   4e-08
sp|Q8C854|MYEF2_MOUSE Myelin expression factor 2 OS=Mus musculus...    58   4e-08
sp|Q9P2K5|MYEF2_HUMAN Myelin expression factor 2 OS=Homo sapiens...    58   4e-08
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    58   5e-08
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05...    57   8e-08
sp|P19684|ROC5_NICSY 33 kDa ribonucleoprotein, chloroplastic OS=...    57   1e-07
sp|Q62826|HNRPM_RAT Heterogeneous nuclear ribonucleoprotein M OS...    56   2e-07
sp|P52272|HNRPM_HUMAN Heterogeneous nuclear ribonucleoprotein M ...    56   2e-07
sp|Q9D0E1|HNRPM_MOUSE Heterogeneous nuclear ribonucleoprotein M ...    55   3e-07
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido...    54   5e-07
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido...    54   9e-07
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    52   2e-06
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ...    52   2e-06
sp|P25555|GBP2_YEAST Single-strand telomeric DNA-binding protein...    52   2e-06
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido...    52   3e-06
sp|Q6PFR5|TRA2A_MOUSE Transformer-2 protein homolog OS=Mus muscu...    52   3e-06
sp|Q13595|TRA2A_HUMAN Transformer-2 protein homolog OS=Homo sapi...    52   3e-06
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    51   4e-06
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ...    51   6e-06
sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic ...    51   6e-06
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=...    50   7e-06
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ...    50   7e-06

>sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens
           GN=THOC4 PE=1 SV=3
          Length = 257

 Score =  125 bits (315), Expect = 1e-28
 Identities = 72/180 (40%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
 Frame = +2

Query: 41  QWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYD 220
           +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF+E G +K++ VHYD
Sbjct: 86  KWQHDLFDSGFG-----GGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYD 140

Query: 221 RSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVRVAN---- 388
           RSGRS GTA+V + R+ADA+ A K+YN V LDG+PM I++V + +     P +  N    
Sbjct: 141 RSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDAQRRPAQSVNRGGM 200

Query: 389 ----GAASIGRGAQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDKSAADLDAELDDYHA 556
               GA   G G    + T                           SA +LDA+LD Y+A
Sbjct: 201 TRNRGAGGFGGGGGTRRGTR--------GGARGRGRGAGRNSKQQLSAEELDAQLDAYNA 252


>sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus
           GN=Thoc4 PE=1 SV=3
          Length = 255

 Score =  123 bits (308), Expect = 9e-28
 Identities = 72/177 (40%), Positives = 96/177 (54%), Gaps = 5/177 (2%)
 Frame = +2

Query: 41  QWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYD 220
           +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF+E G +K++ VHYD
Sbjct: 85  KWQHDLFDSGFG-----GGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYD 139

Query: 221 RSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVRVANGAAS 400
           RSGRS GTA+V + R+ADA+ A K+YN V LDG+PM I++V + +     P      A S
Sbjct: 140 RSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRP------AQS 193

Query: 401 IGRGAQVTKETS-----TXXXXXXXXXXXXXXXXXXXXXXXDKSAADLDAELDDYHA 556
           I RG       S                               SA +LDA+LD Y+A
Sbjct: 194 INRGGMTRNRGSGGFGGGGTRRGTRGGSRGRGRGTGRNSKQQLSAEELDAQLDAYNA 250


>sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2
           OS=Mus musculus GN=Refbp2 PE=1 SV=1
          Length = 218

 Score =  119 bits (299), Expect = 1e-26
 Identities = 69/173 (39%), Positives = 95/173 (54%), Gaps = 1/173 (0%)
 Frame = +2

Query: 41  QWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYD 220
           +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF+E G +K++ V YD
Sbjct: 55  KWQHDLFDSGCG-----GGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYD 109

Query: 221 RSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVRVAN-GAA 397
           RSGRS GTA+V + RRADA+ A K+Y  V LDG+PM I++V + +     P +  N G  
Sbjct: 110 RSGRSLGTADVHFERRADALKAMKQYKGVPLDGRPMDIQLVASQIDPQRRPAQSGNRGGM 169

Query: 398 SIGRGAQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDKSAADLDAELDDYHA 556
           +  RG+                                 SA +LDA+LD Y+A
Sbjct: 170 TRSRGS---------GGFGGRGSQGRGRGTGRNSKQQQLSAEELDAQLDAYNA 213


>sp|Q09330|MLO3_SCHPO mRNA export protein mlo3
           OS=Schizosaccharomyces pombe GN=mlo3 PE=1 SV=1
          Length = 199

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
 Frame = +2

Query: 104 IETGTKLFISNLDFGVSNEDIKELF-SEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAV 280
           I   +K+ +SNL   V+   +KELF   IG  KR ++ Y  +GRSKG A +++SR  DA 
Sbjct: 51  ISEESKIIVSNLPTDVTEAQVKELFVKSIGPCKRVSLAYGPNGRSKGIATIIFSRPGDAT 110

Query: 281 AASKRYNNVQLDG-KPMKIEIV------GTNLAIPAPPVRVANGAASIGRGAQVTKETST 439
            A ++Y    +DG + MK+EI+        +LA    P   A+  AS   GA+ +K  +T
Sbjct: 111 RAYEQYEGRLVDGTRKMKVEIILDPSRQLNSLAARVSPASNASATAS-KNGAKSSKRKTT 169

Query: 440 XXXXXXXXXXXXXXXXXXXXXXXDKSAADLDAELDDY 550
                                   KSA +LD E+DDY
Sbjct: 170 --------------RRRRTPNRPKKSAEELDKEMDDY 192


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 66.2 bits (160), Expect = 1e-10
 Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
 Frame = +2

Query: 47  DHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR- 223
           + D++ +G   AP+  N+      KLF+ NL F V +  + +LF   G+++   V YD+ 
Sbjct: 77  EDDMFADGDDSAPVERNS-FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKV 135

Query: 224 SGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVR---VANGA 394
           +GRS+G   V  S  A+  AA++++N  + +G+P+++       A P PP R    + G 
Sbjct: 136 TGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVN------AGPPPPKREESFSRGP 189

Query: 395 ASIGRGAQ 418
            S G G++
Sbjct: 190 RSGGYGSE 197



 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = +2

Query: 98  TGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRAD 274
           +G  +G +L++ NL +GV +  ++ LF+E G +  + V YDR SGRSKG   V  S   +
Sbjct: 251 SGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQE 310

Query: 275 AVAASKRYNNVQLDGKPMKI 334
              A    N   LDG+ +++
Sbjct: 311 VQKAINSLNGADLDGRQIRV 330


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 37/113 (32%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
 Frame = +2

Query: 47  DHDLYEEG-ASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR 223
           + ++ E+G A VAP +  +      KLF+ NL F V +  + +LF   G+++   V YD+
Sbjct: 68  EFEVEEDGFADVAPPKEQS-FSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDK 126

Query: 224 -SGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVR 379
            +GRS+G   V  S  ++  AA++++N  +LDG+P+++       A P PP R
Sbjct: 127 ITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN------AGPPPPKR 173



 Score = 54.7 bits (130), Expect = 4e-07
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = +2

Query: 98  TGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRAD 274
           +G  +G ++++ NL +GV +  ++ LFSE G +  + V YDR SGRSKG   V Y    +
Sbjct: 198 SGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQE 257

Query: 275 AVAASKRYNNVQLDGKPMKI 334
              A K  +   LDG+ +++
Sbjct: 258 VQNAIKSLDGADLDGRQIRV 277


>sp|Q8BG81|PDIP3_MOUSE Polymerase delta-interacting protein 3 OS=Mus
           musculus GN=Poldip3 PE=2 SV=1
          Length = 420

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 36/93 (38%), Positives = 52/93 (55%)
 Frame = +2

Query: 62  EEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDRSGRSKG 241
           E    + P  P      GTK+ ++NL   V+ EDI ELF   G +KR+ + +       G
Sbjct: 262 EPPKELPPAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------G 315

Query: 242 TAEVVYSRRADAVAASKRYNNVQLDGKPMKIEI 340
            AEVV+ ++ DA+ A K+YNN  LDG+PMK  +
Sbjct: 316 VAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNL 348


>sp|Q9BY77|PDIP3_HUMAN Polymerase delta-interacting protein 3
           OS=Homo sapiens GN=POLDIP3 PE=1 SV=2
          Length = 421

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = +2

Query: 113 GTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASK 292
           GTK+ ++NL   V+ EDI ELF   G +KR+ + +       G AEVV+ ++ DA+ A K
Sbjct: 279 GTKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYK 332

Query: 293 RYNNVQLDGKPMKIEI 340
           +YNN  LDG+PMK  +
Sbjct: 333 KYNNRCLDGQPMKCNL 348


>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic
           OS=Nicotiana sylvestris PE=2 SV=1
          Length = 291

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = +2

Query: 71  ASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR-SGRSKGTA 247
           +S    R    +++  ++++ NL +GV +  +KELFSE G++  + V YDR SGRS+G  
Sbjct: 192 SSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFG 251

Query: 248 EVVYSRRADAVAASKRYNNVQLDGKPMKI 334
            V YS   +   A    N V LDG+ +++
Sbjct: 252 FVTYSSSKEVNDAIDSLNGVDLDGRSIRV 280



 Score = 54.3 bits (129), Expect = 5e-07
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
 Frame = +2

Query: 119 KLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRADAVAASKR 295
           KLF+ NL F V +  +  LF   G+++   V YD+ +GRS+G   V  S + +  AA ++
Sbjct: 88  KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQ 147

Query: 296 YNNVQLDGKPMKIEIVGTNLAIPAPPVRVANGAASIGRG 412
           +N  ++DG+ +++       A PAP  R  N +   GRG
Sbjct: 148 FNGYEIDGRAIRVN------AGPAPAKR-ENSSFGGGRG 179


>sp|Q8C854|MYEF2_MOUSE Myelin expression factor 2 OS=Mus musculus
           GN=Myef2 PE=1 SV=1
          Length = 591

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 26/76 (34%), Positives = 47/76 (61%)
 Frame = +2

Query: 113 GTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASK 292
           G+ +F++NLDF V  + +KE+FS  G +KR+ +  D+ G+S+G   V + +  +AV A  
Sbjct: 223 GSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAIS 282

Query: 293 RYNNVQLDGKPMKIEI 340
            +N   L  +PM +++
Sbjct: 283 MFNGQFLFDRPMHVKM 298



 Score = 41.2 bits (95), Expect = 0.004
 Identities = 19/76 (25%), Positives = 42/76 (55%)
 Frame = +2

Query: 113 GTKLFISNLDFGVSNEDIKELFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASK 292
           G ++F+ NL F ++ + +KE FS+ G +  + +  + +G+SKG   V +     A  A +
Sbjct: 513 GNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFESAESAEKACR 571

Query: 293 RYNNVQLDGKPMKIEI 340
             N +++ G+ + + +
Sbjct: 572 IMNGIKISGREIDVRL 587



 Score = 37.7 bits (86), Expect = 0.050
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +2

Query: 119 KLFISNLDFGVSNEDIKELFSE-IGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKR 295
           ++FISN+ + +  + IK+L  E +G++    +  D  G+S+G   V +        A + 
Sbjct: 92  RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALET 151

Query: 296 YNNVQLDGKPMKIE 337
            N   L G+P+ I+
Sbjct: 152 MNKYDLSGRPLNIK 165
tr_hit_id A7NZ48
Definition tr|A7NZ48|A7NZ48_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 189
Score (bit) 190.0
E-value 7.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962206|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_D21, 5'
         (633 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7NZ48|A7NZ48_VITVI Chromosome chr6 scaffold_3, whole genome ...   190   7e-47
tr|A9S944|A9S944_PHYPA Predicted protein OS=Physcomitrella paten...   178   2e-43
tr|A5BY89|A5BY89_VITVI Putative uncharacterized protein OS=Vitis...   177   5e-43
tr|Q68VB5|Q68VB5_NICBE ALY protein OS=Nicotiana benthamiana GN=a...   175   2e-42
tr|A9RE63|A9RE63_PHYPA Predicted protein OS=Physcomitrella paten...   175   2e-42
tr|Q3E888|Q3E888_ARATH Uncharacterized protein At5g59950.3 OS=Ar...   175   2e-42
tr|Q9FJE1|Q9FJE1_ARATH RNA and export factor binding protein 2-I...   172   1e-41
tr|Q8L773|Q8L773_ARATH Transcriptional coactivator-like protein ...   172   2e-41
tr|Q8LCA6|Q8LCA6_ARATH Transcriptional coactivator-like protein ...   169   2e-40
tr|Q1MSH0|Q1MSH0_NICBE ALY protein OS=Nicotiana benthamiana GN=a...   168   2e-40
tr|B6T346|B6T346_MAIZE Putative uncharacterized protein OS=Zea m...   166   8e-40
tr|Q10N90|Q10N90_ORYSJ Os03g0278300 protein OS=Oryza sativa subs...   166   1e-39
tr|A2XF57|A2XF57_ORYSI Putative uncharacterized protein OS=Oryza...   166   1e-39
tr|B6TMR7|B6TMR7_MAIZE THO complex subunit 4 OS=Zea mays PE=2 SV=1    165   2e-39
tr|B3H4K4|B3H4K4_ARATH Uncharacterized protein At5g59950.4 OS=Ar...   165   2e-39
tr|Q68VB6|Q68VB6_NICBE ALY protein OS=Nicotiana benthamiana GN=a...   164   4e-39
tr|B4FUT7|B4FUT7_MAIZE Putative uncharacterized protein OS=Zea m...   164   4e-39
tr|Q9LZ49|Q9LZ49_ARATH Putative uncharacterized protein T22P11_1...   164   5e-39
tr|Q8L719|Q8L719_ARATH Putative uncharacterized protein At5g0253...   164   5e-39
tr|Q3E889|Q3E889_ARATH Uncharacterized protein At5g59950.2 OS=Ar...   162   2e-38
tr|A9SGU2|A9SGU2_PHYPA Predicted protein OS=Physcomitrella paten...   156   9e-37
tr|Q2QZ01|Q2QZ01_ORYSJ Os12g0100100 protein OS=Oryza sativa subs...   155   1e-36
tr|B4FQD9|B4FQD9_MAIZE Putative uncharacterized protein OS=Zea m...   155   2e-36
tr|Q10N89|Q10N89_ORYSJ cDNA clone:002-103-H02, full insert seque...   154   4e-36
tr|Q2RBS3|Q2RBS3_ORYSJ RNA recognition motif family protein, exp...   151   3e-35
tr|B8AJ06|B8AJ06_ORYSI Putative uncharacterized protein OS=Oryza...   151   3e-35
tr|A9TZS6|A9TZS6_PHYPA Predicted protein OS=Physcomitrella paten...   150   6e-35
tr|A3C7R2|A3C7R2_ORYSJ Putative uncharacterized protein OS=Oryza...   147   5e-34
tr|A5ATR5|A5ATR5_VITVI Putative uncharacterized protein OS=Vitis...   145   2e-33
tr|Q0IVA9|Q0IVA9_ORYSJ Os11g0100200 protein OS=Oryza sativa subs...   143   1e-32

>tr|A7NZ48|A7NZ48_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024369001
           PE=4 SV=1
          Length = 243

 Score =  190 bits (482), Expect = 7e-47
 Identities = 104/189 (55%), Positives = 124/189 (65%), Gaps = 6/189 (3%)
 Frame = +2

Query: 26  RAPEGQWDHDLYEEGASVAPLRPN--TGIETGTKLFISNLDFGVSNEDIKELFSEIGDIK 199
           +APE  W HD++ + A+  P +    + IETGTKL+ISNLD+GVSNEDIKELFSE+GD+K
Sbjct: 55  KAPETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLK 114

Query: 200 RSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVR 379
           R ++HYDRSGRSKGTAEVV+SRR DAVAA KRYNNVQLDGKPMKIEIVGTN+A PA    
Sbjct: 115 RYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPP 174

Query: 380 VANGAASIGRG----AQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDKSAADLDAELDD 547
           V NG      G    AQ    +                           SA DLDA+L+ 
Sbjct: 175 VTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRGEKVSAEDLDADLEK 234

Query: 548 YHAEAMQIS 574
           YH+EAMQI+
Sbjct: 235 YHSEAMQIN 243


>tr|A9S944|A9S944_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_57202 PE=4 SV=1
          Length = 274

 Score =  178 bits (452), Expect = 2e-43
 Identities = 103/208 (49%), Positives = 126/208 (60%), Gaps = 23/208 (11%)
 Frame = +2

Query: 14  TPAQRAPEGQWDHDLYEEGASV--APLRPNTG-IETGTKLFISNLDFGVSNEDIKELFSE 184
           TP +RA +  W HD+YE  A    A +R   G IETGTKL+ISNLD GVSN+DIKELF E
Sbjct: 65  TPVRRAMDSPWQHDMYENFAPAPSASVRGTGGNIETGTKLYISNLDHGVSNDDIKELFGE 124

Query: 185 IGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AI 361
           +GD+KR +++YDRSGRSKGTAEVV++R+ DAV A +RYNNVQLDGKPMKIE++GTNL A 
Sbjct: 125 VGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVNAMRRYNNVQLDGKPMKIEMIGTNLVAA 184

Query: 362 PAPPVRVANGAASIGRGAQVTKETS-------------------TXXXXXXXXXXXXXXX 484
           P P +R +   AS+   A+    TS                                   
Sbjct: 185 PVPAIRSSGAMASLAARARHLSSTSLPFARGPVSDRGRPGSSALRGRGGGRSAGGVGGRG 244

Query: 485 XXXXXXXXDKSAADLDAELDDYHAEAMQ 568
                   +KSA DLDAEL+ YHAEAMQ
Sbjct: 245 ERRSGPAVEKSAEDLDAELESYHAEAMQ 272


>tr|A5BY89|A5BY89_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_023787 PE=4 SV=1
          Length = 281

 Score =  177 bits (449), Expect = 5e-43
 Identities = 88/131 (67%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
 Frame = +2

Query: 26  RAPEGQWDHDLYEEGASVAPLRPN--TGIETGTKLFISNLDFGVSNEDIKELFSEIGDIK 199
           +APE  W HD++ + A+  P +    + IETGTKL+ISNLD+GVSNEDIKELFSE+GD+K
Sbjct: 55  KAPETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNEDIKELFSEVGDLK 114

Query: 200 RSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPAPPVR 379
           R ++HYDRSGRSKGTAEVV+SRR DAVAA KRYNNVQLDGKPMKIEIVGTN+A PA    
Sbjct: 115 RYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAVPP 174

Query: 380 VANGAASIGRG 412
           V NG      G
Sbjct: 175 VTNGTFGNSNG 185


>tr|Q68VB5|Q68VB5_NICBE ALY protein OS=Nicotiana benthamiana GN=aly
           PE=2 SV=1
          Length = 252

 Score =  175 bits (444), Expect = 2e-42
 Identities = 102/196 (52%), Positives = 117/196 (59%), Gaps = 15/196 (7%)
 Frame = +2

Query: 26  RAPEGQWDHDLYEEGASVAPLRPNTG------IETGTKLFISNLDFGVSNEDIKELFSEI 187
           +APE  W+HD++       P     G      I TGTKL+ISNLD+GVSNEDIKELFSE 
Sbjct: 57  KAPEAAWNHDMFAAADQAFPFGQAGGDQAASSISTGTKLYISNLDYGVSNEDIKELFSEA 116

Query: 188 GDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPA 367
           GD+KR  +HYDRSGRSKGTAEVV+SRR DA+AA KRYNNVQLDGKPMKIEIVGTN+A PA
Sbjct: 117 GDLKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGKPMKIEIVGTNIATPA 176

Query: 368 PPVRVANGAASIG--RGAQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDK-------SA 520
            P    NGA   G   G   T +  +                        +       SA
Sbjct: 177 AP--AFNGAFGFGDTNGGPRTDQARSGGFGRSRGGRGRGRGFRGGSRGRGRGDRGEKVSA 234

Query: 521 ADLDAELDDYHAEAMQ 568
            DLDA+L  YH EAMQ
Sbjct: 235 EDLDADLMKYHTEAMQ 250


>tr|A9RE63|A9RE63_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_112481 PE=4 SV=1
          Length = 249

 Score =  175 bits (444), Expect = 2e-42
 Identities = 96/193 (49%), Positives = 122/193 (63%), Gaps = 11/193 (5%)
 Frame = +2

Query: 23  QRAPEGQWDHDLYEEGASVAPLRPNT---GIETGTKLFISNLDFGVSNEDIKELFSEIGD 193
           +R P+  W HD+YE     AP        GIETGTKL+ISNLD+GVSN+DIKELF E+GD
Sbjct: 55  RRDPDSTWQHDMYENFLPAAPSSGRGVTGGIETGTKLYISNLDYGVSNDDIKELFGEVGD 114

Query: 194 IKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIPAP 370
           +KR +++YDRSGRSKGTAEVV++R+ DAV+A KRYNNVQLDGKPMKIE++GTNL A P P
Sbjct: 115 LKRCSINYDRSGRSKGTAEVVFTRKPDAVSAMKRYNNVQLDGKPMKIEMIGTNLIAAPVP 174

Query: 371 PVRVANGAASI-GRGAQVTKE------TSTXXXXXXXXXXXXXXXXXXXXXXXDKSAADL 529
             R +   A +  RG  V+          +                       +K+  DL
Sbjct: 175 AARSSGAMAMVASRGRPVSSAFRGRGGGRSAGGAGAGGRGAGGRGGGRSATAVEKTVEDL 234

Query: 530 DAELDDYHAEAMQ 568
           DA+L+ YHA+AMQ
Sbjct: 235 DADLESYHADAMQ 247


>tr|Q3E888|Q3E888_ARATH Uncharacterized protein At5g59950.3
           OS=Arabidopsis thaliana GN=At5g59950 PE=4 SV=1
          Length = 242

 Score =  175 bits (443), Expect = 2e-42
 Identities = 101/191 (52%), Positives = 123/191 (64%), Gaps = 5/191 (2%)
 Frame = +2

Query: 11  TTPAQRAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEI 187
           + P Q APE  W HD++ + +      R + GIETGTKL+ISNLD+GV NEDIKELF+E+
Sbjct: 50  SAPYQSAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEV 109

Query: 188 GDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIP 364
           G++KR TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    
Sbjct: 110 GELKRYTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAA 169

Query: 365 APPVRVANGAASIG--RGAQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDK-SAADLDA 535
           AP  R ANG ++    RG Q                              +K SA DLDA
Sbjct: 170 APSGRPANGNSNGAPWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDA 229

Query: 536 ELDDYHAEAMQ 568
           +LD YH+  M+
Sbjct: 230 DLDKYHSGDME 240


>tr|Q9FJE1|Q9FJE1_ARATH RNA and export factor binding protein
           2-I-like protein OS=Arabidopsis thaliana PE=4 SV=1
          Length = 239

 Score =  172 bits (437), Expect = 1e-41
 Identities = 97/183 (53%), Positives = 120/183 (65%), Gaps = 2/183 (1%)
 Frame = +2

Query: 26  RAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKR 202
           +APE  W HD++ + +      R + GIETGTKL+ISNLD+GV NEDIKELF+E+G++KR
Sbjct: 57  KAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKR 116

Query: 203 STVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIPAPPVR 379
            TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    AP  R
Sbjct: 117 YTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAAPSGR 176

Query: 380 VANGAASIGRGAQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDKSAADLDAELDDYHAE 559
            ANG ++ G+G    +                             SA DLDA+LD YH+ 
Sbjct: 177 PANGNSNGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKI--SAEDLDADLDKYHSG 234

Query: 560 AMQ 568
            M+
Sbjct: 235 DME 237


>tr|Q8L773|Q8L773_ARATH Transcriptional coactivator-like protein
           OS=Arabidopsis thaliana GN=At5g59950 PE=2 SV=1
          Length = 244

 Score =  172 bits (435), Expect = 2e-41
 Identities = 99/186 (53%), Positives = 121/186 (65%), Gaps = 5/186 (2%)
 Frame = +2

Query: 26  RAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKR 202
           +APE  W HD++ + +      R + GIETGTKL+ISNLD+GV NEDIKELF+E+G++KR
Sbjct: 57  KAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKR 116

Query: 203 STVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIPAPPVR 379
            TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    AP  R
Sbjct: 117 YTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAAPSGR 176

Query: 380 VANGAASIG--RGAQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDK-SAADLDAELDDY 550
            ANG ++    RG Q                              +K SA DLDA+LD Y
Sbjct: 177 PANGNSNGAPWRGGQGRGGQQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKY 236

Query: 551 HAEAMQ 568
           H+  M+
Sbjct: 237 HSGDME 242


>tr|Q8LCA6|Q8LCA6_ARATH Transcriptional coactivator-like protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 243

 Score =  169 bits (427), Expect = 2e-40
 Identities = 97/185 (52%), Positives = 118/185 (63%), Gaps = 4/185 (2%)
 Frame = +2

Query: 26  RAPEGQWDHDLYEEGASVAPL-RPNTGIETGTKLFISNLDFGVSNEDIKELFSEIGDIKR 202
           +APE  W HD++ + +      R + GIETGTKL+IS LD+GV NEDIKELF+E+G++KR
Sbjct: 57  KAPESTWGHDMFSDRSEDHRSGRSSAGIETGTKLYISXLDYGVMNEDIKELFAEVGELKR 116

Query: 203 STVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNL-AIPAPPVR 379
            TVH+DRSGRSKGTAEVVYSRR DA+AA K+YN+VQLDGKPMKIEIVGTNL    AP  R
Sbjct: 117 YTVHFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAAPSGR 176

Query: 380 VANGAASIG--RGAQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDKSAADLDAELDDYH 553
            ANG ++    RG Q                                SA DLDA+LD YH
Sbjct: 177 PANGNSNGAPWRGGQGRGGQRGGGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYH 236

Query: 554 AEAMQ 568
           +  M+
Sbjct: 237 SGDME 241


>tr|Q1MSH0|Q1MSH0_NICBE ALY protein OS=Nicotiana benthamiana GN=aly
           PE=2 SV=1
          Length = 246

 Score =  168 bits (426), Expect = 2e-40
 Identities = 96/187 (51%), Positives = 115/187 (61%), Gaps = 7/187 (3%)
 Frame = +2

Query: 29  APEGQWDHDLYEEGASVAPLRPN----TGIETGTKLFISNLDFGVSNEDIKELFSEIGDI 196
           APE  WDHD++ E A   P        +GIETG KL ISNLD+GVSNEDIKELFSE GDI
Sbjct: 60  APESTWDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDIKELFSEAGDI 119

Query: 197 KRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRYNNVQLDGKPMKIEIVGTNLAIPA-PP 373
           KR ++HYD+SGRSKGTAEV++SRR DA AA K+YNNVQLDGKPMKIE  G N+  PA PP
Sbjct: 120 KRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFAGPNIGAPALPP 179

Query: 374 V--RVANGAASIGRGAQVTKETSTXXXXXXXXXXXXXXXXXXXXXXXDKSAADLDAELDD 547
           +  R+        R  Q  +                           + SA DLDA+L+ 
Sbjct: 180 IRNRLYRNPNPAPRSQQ--RGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEK 237

Query: 548 YHAEAMQ 568
           YH+EAM+
Sbjct: 238 YHSEAME 244