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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962205
Clone id TST39A01NGRL0013_D20
Library
Length 668
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_D20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GCCAAATCCTTCATTGGAGCAAACACACTCTACGTGTTCAGAGAAGTGGGTCAAATCGCC
CTTTCGCAGTTCATATTTAGCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGCC
TGCACATATCCCTATTTCTGATGGCACTTTGTGCTTCGCCTGTGGGAATTTATCTCTCCT
CTTGCTCCGGATCGTCTGCCTCTGCTCAATTTCGAGCCTCCCAGCTCCAATGCCTAGCTT
CCAAATTTCAATGGGATCCCCTCAGGGTTGCACACTTCAGGCTTCTTTGCGGGAATAACC
TCTTACCAGCGAACTCATGCAGAAGAAGCGCCATTTTCAGCTCCCCTCTTGCAAGGCCTC
GAATGCTACATGTAGTGTCCTCACATGAGCGAGGCTCAGAAACAGCGGAGGAGAAACCGT
GCATGGAGGCAAAGCAGCAGAAAACTGTGCTGGAAAGGGTTACAGAGGCGGCTCTGGCAT
GCTTTGATATTGTCAAGAAGCCTGCCGTTGTAGCCCTTGTTGTTGGCTTGTTACTCACAC
AGATTCCAGATGCATGGGCAGCATCAGGGGGGATGATGGGCGGCCGAGCATTTTCCTCGG
GTGGCAGCCGATCATCTGGGGGCTATGCAGGCAGAACATATTCTGTTCCAAGGTCCGGTT
TCTCTTTC
■■Homology search results ■■ -
sp_hit_id Q5RGJ8
Definition sp|Q5RGJ8|GNPTA_DANRE N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Danio rerio
Align length 58
Score (bit) 32.0
E-value 3.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962205|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_D20, 5'
         (668 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5RGJ8|GNPTA_DANRE N-acetylglucosamine-1-phosphotransferase s...    32   3.0  
sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens GN=...    32   4.0  
sp|P21506|ZNF10_HUMAN Zinc finger protein 10 OS=Homo sapiens GN=...    30   8.9  
sp|A4JLS0|KHSE_BURVG Homoserine kinase OS=Burkholderia vietnamie...    30   8.9  
sp|Q0BAN2|KHSE_BURCM Homoserine kinase OS=Burkholderia ambifaria...    30   8.9  

>sp|Q5RGJ8|GNPTA_DANRE N-acetylglucosamine-1-phosphotransferase
           subunits alpha/beta OS=Danio rerio GN=gnptab PE=2 SV=1
          Length = 1219

 Score = 32.0 bits (71), Expect = 3.0
 Identities = 20/58 (34%), Positives = 23/58 (39%)
 Frame = +2

Query: 437 AENCAGKGYRGGSGML*YCQEACRCSPCCWLVTHTDSRCMGSIRGDDGRPSIFLGWQP 610
           AE C G   + G     YC +AC  S C W        C GS R      S+  G QP
Sbjct: 444 AEGCPGSWIKDG-----YCDKACNNSACDW----DGGDCQGSSRFGGAGGSVIGGGQP 492


>sp|Q8N8S7|ENAH_HUMAN Protein enabled homolog OS=Homo sapiens
           GN=ENAH PE=1 SV=2
          Length = 591

 Score = 31.6 bits (70), Expect = 4.0
 Identities = 15/24 (62%), Positives = 15/24 (62%)
 Frame = -3

Query: 477 PEPPL*PFPAQFSAALPPCTVSPP 406
           P PPL P PAQ S ALPP    PP
Sbjct: 315 PPPPLPPGPAQASVALPPPPGPPP 338


>sp|P21506|ZNF10_HUMAN Zinc finger protein 10 OS=Homo sapiens
           GN=ZNF10 PE=1 SV=3
          Length = 573

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = +3

Query: 246 FQWDPLRVAHFRLLCGNNLLPANSCRRSAIFSSPLARPRMLHVVSSHERGSETAEEKPCM 425
           F W    V H R   G+ L   N C +S + SS L R +  H       G +  E   C 
Sbjct: 330 FSWFSHLVTHQRTHTGDKLYTCNQCGKSFVHSSRLIRHQRTHT------GEKPYECPECG 383

Query: 426 EAKQQKTVL 452
           ++ +Q T L
Sbjct: 384 KSFRQSTHL 392


>sp|A4JLS0|KHSE_BURVG Homoserine kinase OS=Burkholderia
           vietnamiensis (strain G4 / LMG 22486) GN=thrB PE=3 SV=1
          Length = 332

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = +1

Query: 247 FNGIPSGLHTSGFFAG-------ITSYQRTHAEEAPFSAPLLQGL 360
           F GIPSG+  S FF         +T +++  AE+ PF   L++ L
Sbjct: 27  FRGIPSGIENSNFFLTTTRGEYVLTIFEKLTAEQLPFYLDLMRHL 71


>sp|Q0BAN2|KHSE_BURCM Homoserine kinase OS=Burkholderia ambifaria
           (strain ATCC BAA-244 / AMMD) GN=thrB PE=3 SV=1
          Length = 332

 Score = 30.4 bits (67), Expect = 8.9
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = +1

Query: 247 FNGIPSGLHTSGFFAG-------ITSYQRTHAEEAPFSAPLLQGL 360
           F GIPSG+  S FF         +T +++  AE+ PF   L++ L
Sbjct: 27  FRGIPSGIENSNFFLTTTRGEYVLTIFEKLTAEQLPFYLDLMRHL 71
tr_hit_id B6NV12
Definition tr|B6NV12|B6NV12_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 51
Score (bit) 35.4
E-value 3.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962205|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_D20, 5'
         (668 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6NV12|B6NV12_BRAFL Putative uncharacterized protein (Fragmen...    35   3.2  
tr|Q4WUN8|Q4WUN8_ASPFU Neutral amino acid permease, putative OS=...    35   5.5  
tr|A1DES3|A1DES3_NEOFI Amino acid transporter, putative OS=Neosa...    34   7.2  
tr|A5K3Y8|A5K3Y8_PLAVI Putative uncharacterized protein OS=Plasm...    34   9.4  
tr|A0E8C7|A0E8C7_PARTE Chromosome undetermined scaffold_82, whol...    34   9.4  

>tr|B6NV12|B6NV12_BRAFL Putative uncharacterized protein (Fragment)
           OS=Branchiostoma floridae GN=BRAFLDRAFT_237047 PE=4 SV=1
          Length = 193

 Score = 35.4 bits (80), Expect = 3.2
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 10/51 (19%)
 Frame = +2

Query: 509 CSPCCWLVTHT----------DSRCMGSIRGDDGRPSIFLGWQPIIWGLCR 631
           C P CW  +H            S C G+ R   G P+  LG QP  WG  R
Sbjct: 66  CQPRCWGASHAAGVPAALLGCQSCCWGASRAAAGVPAALLGCQPCCWGASR 116


>tr|Q4WUN8|Q4WUN8_ASPFU Neutral amino acid permease, putative
           OS=Aspergillus fumigatus GN=AFUA_5G09120 PE=4 SV=1
          Length = 476

 Score = 34.7 bits (78), Expect = 5.5
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
 Frame = -2

Query: 526 PTTRATTAGFLTISKHARAASVTLSSTVFCCFASMHGFSSAVSEPRSCED----TTCSIR 359
           P T     GF  I     A  +T S+T+FC  A+   F   +SE R   D       S+ 
Sbjct: 224 PQTGPFDLGFRAIGNPTFAVGITASATIFCSSAATSAFLPVISEMRKPRDYPKAVYLSMS 283

Query: 358 GLARGELKMALLLHEFAGK 302
            +    L  +L+++ + GK
Sbjct: 284 FVTTSYLAFSLVIYAWCGK 302


>tr|A1DES3|A1DES3_NEOFI Amino acid transporter, putative
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_078200 PE=4 SV=1
          Length = 476

 Score = 34.3 bits (77), Expect = 7.2
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
 Frame = -2

Query: 526 PTTRATTAGFLTISKHARAASVTLSSTVFCCFASMHGFSSAVSEPRSCED----TTCSIR 359
           P T     GF  I     A  +T S+T+FC  A+   F   +SE R   D       S+ 
Sbjct: 224 PQTGPFDLGFRAIGHPTFAVGITASATIFCSSAATSAFLPVISEMRKPRDYPKAVYLSMS 283

Query: 358 GLARGELKMALLLHEFAGK 302
            +    L  +L+++ + GK
Sbjct: 284 FVTTSYLAFSLVIYAWCGK 302


>tr|A5K3Y8|A5K3Y8_PLAVI Putative uncharacterized protein
           OS=Plasmodium vivax GN=PVX_118380 PE=3 SV=1
          Length = 988

 Score = 33.9 bits (76), Expect = 9.4
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -2

Query: 595 ENARPPIIPPDAAHASGICVSNKPTTRATTAGFLTISKHARAASVTLSSTV 443
           ++ RPP  PPD  HA GI  S   +   TT+   T+SK    +  T+S  +
Sbjct: 369 QHNRPPGTPPDGGHAEGISKSKGKSKTKTTSVGETLSKDILLSDDTISDAL 419


>tr|A0E8C7|A0E8C7_PARTE Chromosome undetermined scaffold_82, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00024272001 PE=4 SV=1
          Length = 1966

 Score = 33.9 bits (76), Expect = 9.4
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
 Frame = +2

Query: 356 ASNATCSVLT*ARLRNSGGE-------TVHGGKAAENCAGKGYRGGSGML*YCQEACRCS 514
           A++A C  ++  +  NS G+       T    K AE+C GKG  GGSG   +   +CR  
Sbjct: 99  ATDAECQAIS--KQCNSDGQAFCVDPATCTTYKTAEDCTGKGSSGGSGTCVW-DTSCREQ 155

Query: 515 PC--CWLVTHTDSRCMGSIRG 571
            C    +  +TD++C   I+G
Sbjct: 156 KCTEADVTFNTDAQCNNFIKG 176