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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK962134
Clone id TST39A01NGRL0013_A20
Library
Length 547
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_A20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CATAAAGCTCACATACAACTTCAATGGCAAAAGATCACAGGCTTCCCGGACACAAGAATA
TCGAATGCATTGATGTGTGTGACAAAAGGGCTCTGAAATGCCCTTAATTATTTGTGGGCC
GTTTTGTTTTCTACATGCAATTTTGAAGGCGAGTAATGAAATGTATTACGGCCGGTCCAG
GCTTGTATATTGTGGAATAGTGTTTTTGTCGTGAAGGCGGTGAGAGGTCTTTTACTTTTC
ATGTAATTGCCAGCAGTTAAAGCTGGCTTAGCTGGCTGAGGTGTGAACACTGCTAACCTC
TCCATATTTACTTTAACCTTGCGGGGGGCGCTCAGGACAGAAAAAACATTCCCAAGCTTC
ACAGCTGTATGAGGGGAGTTTTGTGTTTTCCCTCCGGGTAGAGGAGATATATAAAAAAAA
AGGAGAAAGGAGAAGAGAACCCCCCCCCCCCTTTTTTTTTACAGGTGGGTTGTTAAAAAA
AAAAAAAATTTTTTTTTTTTTTTTTTTGGGGGGCGGGGGGGCCGCGGCCCCAAAAAAAAA
AAAAAAA
■■Homology search results ■■ -
sp_hit_id P79001
Definition sp|P79001|PGPS1_SACPS CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Saccharomyces pastorianus
Align length 78
Score (bit) 33.5
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962134|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_A20, 5'
         (474 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P79001|PGPS1_SACPS CDP-diacylglycerol--glycerol-3-phosphate 3...    33   0.49 
sp|Q53ET0|CRTC2_HUMAN CREB-regulated transcription coactivator 2...    31   3.2  
sp|Q06879|NIFJ_ANASP Pyruvate-flavodoxin oxidoreductase OS=Anaba...    30   4.2  
sp|Q9SU94|ANM11_ARATH Probable protein arginine N-methyltransfer...    30   4.2  
sp|Q3BVV1|RUMA_XANC5 23S rRNA (uracil-5-)-methyltransferase rumA...    30   5.4  
sp|Q8PMU6|RUMA_XANAC 23S rRNA (uracil-5-)-methyltransferase rumA...    30   5.4  
sp|A7RWP6|EIF3E_NEMVE Eukaryotic translation initiation factor 3...    30   5.5  
sp|Q0J2C6|ANM1_ORYSJ Probable protein arginine N-methyltransfera...    30   7.1  
sp|A2Z0C0|ANM1_ORYSI Probable protein arginine N-methyltransfera...    30   7.1  
sp|Q3LRZ1|CRTC2_RAT CREB-regulated transcription coactivator 2 O...    29   9.3  

>sp|P79001|PGPS1_SACPS CDP-diacylglycerol--glycerol-3-phosphate
           3-phosphatidyltransferase OS=Saccharomyces pastorianus
           GN=PGS1 PE=3 SV=1
          Length = 521

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = -2

Query: 344 FSVLSAP-RKVKVNMERLAVFTPQPAKPALTAGNYMKSKRPLTAFTTKTLFHNIQAWTGR 168
           + +LS+P RK  +   +++  +P PA   L                TK+L HN+Q W   
Sbjct: 13  YRLLSSPFRKSSIIQRQMSASSPSPANSYLN-------------MITKSLQHNLQTW--- 56

Query: 167 NTFHYSPSKLHVENKTAH 114
             FH+ P+++ +    +H
Sbjct: 57  --FHFEPNEIDIIESPSH 72


>sp|Q53ET0|CRTC2_HUMAN CREB-regulated transcription coactivator 2
           OS=Homo sapiens GN=CRTC2 PE=1 SV=2
          Length = 693

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 220 PPSRQKHYSTIYKPGPA 170
           PP RQ HY T Y PGP+
Sbjct: 524 PPGRQSHYGTPYPPGPS 540


>sp|Q06879|NIFJ_ANASP Pyruvate-flavodoxin oxidoreductase OS=Anabaena
           sp. (strain PCC 7120) GN=nifJ PE=2 SV=2
          Length = 1199

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -2

Query: 338 VLSAPRKVKVNMERLAVFTPQPAKPALTAGNYMKSKRPLTAFTTKTLFHNIQAWTGRNTF 159
           V++A  +  VN     V +PQ   P +  G Y  S +  T    K +F N+   T +N F
Sbjct: 344 VVTAIHEGWVNKNNSPVPSPQSPVPKIIGGRYGLSSKEFTPAMVKAVFDNLAQATPKNHF 403


>sp|Q9SU94|ANM11_ARATH Probable protein arginine N-methyltransferase
           1.1 OS=Arabidopsis thaliana GN=PRMT1.1 PE=1 SV=1
          Length = 390

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 2   IKLTYNFNGKRSQASRTQEYRM 67
           IKL+Y+ NG+  + SRTQ Y+M
Sbjct: 368 IKLSYSLNGQHCKISRTQHYKM 389


>sp|Q3BVV1|RUMA_XANC5 23S rRNA (uracil-5-)-methyltransferase rumA
           OS=Xanthomonas campestris pv. vesicatoria (strain 85-10)
           GN=rumA PE=3 SV=2
          Length = 444

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = -2

Query: 398 PGGKTQNSPHTAVKLGNVFS-------VLSAPRKVKVNMERLAVFTPQPAKPALTAGNY 243
           P   T   PH  V  G V         +++  R +  N+ER+   TPQ   PALT  N+
Sbjct: 73  PQRVTPRCPHFGVCAGCVLQHLEESQQIVAKQRVLMDNLERIGHVTPQAVLPALTGDNW 131


>sp|Q8PMU6|RUMA_XANAC 23S rRNA (uracil-5-)-methyltransferase rumA
           OS=Xanthomonas axonopodis pv. citri GN=rumA PE=3 SV=1
          Length = 444

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 7/59 (11%)
 Frame = -2

Query: 398 PGGKTQNSPHTAVKLGNVFS-------VLSAPRKVKVNMERLAVFTPQPAKPALTAGNY 243
           P   T   PH  V  G V         +++  R +  N+ER+   TPQ   PALT  N+
Sbjct: 73  PQRVTPRCPHFGVCAGCVLQHLEESQQIVAKQRVLMDNLERIGHVTPQAVLPALTGDNW 131


>sp|A7RWP6|EIF3E_NEMVE Eukaryotic translation initiation factor 3
           subunit E OS=Nematostella vectensis GN=v1g163572 PE=3
           SV=1
          Length = 448

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -1

Query: 147 FKIACRKQNGPQIIKGISEPFCHTHQCIRYSCVREACDLLP 25
           F +ACR          I E FC  HQCI  S + E  ++ P
Sbjct: 322 FLVACRDDFIENARLFIFETFCRIHQCISISMLAEKLNMTP 362


>sp|Q0J2C6|ANM1_ORYSJ Probable protein arginine N-methyltransferase
           1 OS=Oryza sativa subsp. japonica GN=PRMT1 PE=2 SV=1
          Length = 387

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 2   IKLTYNFNGKRSQASRTQEYRM 67
           IKL Y  +G R Q SRTQ Y+M
Sbjct: 365 IKLCYALSGHRCQVSRTQHYKM 386


>sp|A2Z0C0|ANM1_ORYSI Probable protein arginine N-methyltransferase
           1 OS=Oryza sativa subsp. indica GN=PRMT1 PE=2 SV=1
          Length = 387

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 2   IKLTYNFNGKRSQASRTQEYRM 67
           IKL Y  +G R Q SRTQ Y+M
Sbjct: 365 IKLCYALSGHRCQVSRTQHYKM 386


>sp|Q3LRZ1|CRTC2_RAT CREB-regulated transcription coactivator 2
           OS=Rattus norvegicus GN=Crtc2 PE=2 SV=1
          Length = 691

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -3

Query: 220 PPSRQKHYSTIYKPG 176
           PP RQ HY T+Y PG
Sbjct: 522 PPGRQPHYGTLYPPG 536
tr_hit_id A9RXU3
Definition tr|A9RXU3|A9RXU3_PHYPA Protein arginine N-methyltransferase OS=Physcomitrella patens subsp. patens
Align length 22
Score (bit) 40.0
E-value 0.058
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK962134|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0013_A20, 5'
         (474 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RXU3|A9RXU3_PHYPA Protein arginine N-methyltransferase OS=P...    40   0.058
tr|A9S9M5|A9S9M5_PHYPA Protein arginine N-methyltransferase OS=P...    40   0.076
tr|Q1ICF9|Q1ICF9_PSEE4 Siderophore biosynthesis protein OS=Pseud...    37   0.49 
tr|A9AML2|A9AML2_BURM1 NADPH-dependent FMN reductase OS=Burkhold...    34   4.2  
tr|B3MQ86|B3MQ86_DROAN GF20397 OS=Drosophila ananassae GN=GF2039...    34   4.2  
tr|A2E989|A2E989_TRIVA Putative uncharacterized protein OS=Trich...    34   4.2  
tr|B4NMI7|B4NMI7_DROWI GK23155 OS=Drosophila willistoni GN=GK231...    33   5.4  
tr|Q7LV97|Q7LV97_SACPS Putative phosphatidylserine synthase (Fra...    33   5.4  
tr|A7VWK3|A7VWK3_9CLOT Putative uncharacterized protein OS=Clost...    33   7.1  

>tr|A9RXU3|A9RXU3_PHYPA Protein arginine N-methyltransferase
           OS=Physcomitrella patens subsp. patens GN=PRMT1501 PE=4
           SV=1
          Length = 306

 Score = 40.0 bits (92), Expect = 0.058
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +2

Query: 2   IKLTYNFNGKRSQASRTQEYRM 67
           + +TYNF GKRSQASRTQ YRM
Sbjct: 284 VTVTYNFKGKRSQASRTQHYRM 305


>tr|A9S9M5|A9S9M5_PHYPA Protein arginine N-methyltransferase
           OS=Physcomitrella patens subsp. patens GN=PRMT1502 PE=4
           SV=1
          Length = 306

 Score = 39.7 bits (91), Expect = 0.076
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = +2

Query: 2   IKLTYNFNGKRSQASRTQEYRM 67
           + ++YNFNGKRSQA+RTQ YRM
Sbjct: 284 VTVSYNFNGKRSQATRTQHYRM 305


>tr|Q1ICF9|Q1ICF9_PSEE4 Siderophore biosynthesis protein
           OS=Pseudomonas entomophila (strain L48) GN=pvdZ PE=4
           SV=1
          Length = 339

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -2

Query: 302 ERLAVFTPQPAKPALTAGNYMKSKRPLTAFTTKTLFHNI-QAWTGRNTFHYSPSKLHVEN 126
           +RLA   PQP   AL +G  +  +RP   F  +TLF  + Q W G +     P ++ + N
Sbjct: 80  QRLAWQLPQPIPQALASGLLVVGERPGEYFCERTLFWQLPQPWLGASVAGAYPQQMQISN 139

Query: 125 KTAH 114
              H
Sbjct: 140 GKRH 143


>tr|A9AML2|A9AML2_BURM1 NADPH-dependent FMN reductase
           OS=Burkholderia multivorans (strain ATCC 17616 / 249)
           GN=Bmul_3481 PE=4 SV=1
          Length = 283

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 9/53 (16%)
 Frame = -2

Query: 344 FSVLSAP---RKVKVNMERLAVFT------PQPAKPALTAGNYMKSKRPLTAF 213
           F   SAP   R+V +++ER  VFT      P   KP L+  ++ + +RPLTAF
Sbjct: 19  FCYRSAPHCTRRVGISIERKVVFTAATRSLPCSFKPVLSRASHSREERPLTAF 71


>tr|B3MQ86|B3MQ86_DROAN GF20397 OS=Drosophila ananassae GN=GF20397
            PE=4 SV=1
          Length = 2559

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 26/94 (27%), Positives = 43/94 (45%)
 Frame = -2

Query: 410  ISPLPGGKTQNSPHTAVKLGNVFSVLSAPRKVKVNMERLAVFTPQPAKPALTAGNYMKSK 231
            IS  P    ++ P T V+L    +  + PR+++V +ERLA     P   AL   +  +  
Sbjct: 1264 ISITPRTAWRSGPTTRVQLTTPQAAPTQPRRLRVFVERLAAPLRDPNVSALLRWDSPEQG 1323

Query: 230  RPLTAFTTKTLFHNIQAWTGRNTFHYSPSKLHVE 129
            + + A   + L ++I  W G        S+LH E
Sbjct: 1324 QDVGASAVQALEYHISCWLG--------SELHTE 1349


>tr|A2E989|A2E989_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_121780 PE=4 SV=1
          Length = 801

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
 Frame = -2

Query: 392 GKTQNSPHTAVKLGNVF--------SVLSAPRKVKVNMERLAVFTPQPAKPALTAGNYMK 237
           G++ ++P TA+     F        +   A    K+NM        +P  P+  AG  + 
Sbjct: 229 GRSSHNPATAIPKNREFGPQVIRQINTAGAVEAAKINMTMSQKGYRRPLLPSQGAGRLLS 288

Query: 236 SKRPLTAFTTKTLFHNIQAWTGRNTFHYSPSKLHVENK 123
             RP+T     + F N       +TF++ P  L V+++
Sbjct: 289 KSRPIT-----STFPNAPGQDANDTFNFEPVSLPVQDR 321


>tr|B4NMI7|B4NMI7_DROWI GK23155 OS=Drosophila willistoni GN=GK23155
            PE=4 SV=1
          Length = 1235

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 186  TSLDRP*YISLLAFKIACRKQNGPQIIKGISEPFCH 79
            TS+DR  YIS L   ++C  Q   +++ GI+E  C+
Sbjct: 1035 TSVDRRLYISFLQLCLSCLDQRNKEVLNGITEAICN 1070


>tr|Q7LV97|Q7LV97_SACPS Putative phosphatidylserine synthase
           (Fragment) OS=Saccharomyces pastorianus PE=4 SV=1
          Length = 78

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
 Frame = -2

Query: 344 FSVLSAP-RKVKVNMERLAVFTPQPAKPALTAGNYMKSKRPLTAFTTKTLFHNIQAWTGR 168
           + +LS+P RK  +   +++  +P PA   L                TK+L HN+Q W   
Sbjct: 13  YRLLSSPFRKSSIIQRQMSASSPSPANSYLN-------------MITKSLQHNLQTW--- 56

Query: 167 NTFHYSPSKLHVENKTAH 114
             FH+ P+++ +    +H
Sbjct: 57  --FHFEPNEIDIIESPSH 72


>tr|A7VWK3|A7VWK3_9CLOT Putative uncharacterized protein
           OS=Clostridium leptum DSM 753 GN=CLOLEP_02968 PE=3 SV=1
          Length = 409

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
 Frame = -2

Query: 320 KVKVNMERLAVFTPQPAKPA--LTAGNYMKSKRPLTAFTTKTLFHNIQAWTGRN 165
           KV  N  RL V  P    P   LTA       +PL  F T+ ++HN  +  GRN
Sbjct: 78  KVTDNKGRLMVVRPDSTLPIARLTATRLQNELKPLRLFYTQKVYHNYPSLRGRN 131