DK962120 |
Clone id |
TST39A01NGRL0013_A06 |
Library |
TST39 |
Length |
325 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0013_A06. 5' end sequence. |
Accession |
DK962120 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL775Contig1 |
Sequence |
AGCAGATGTTCTGCTATATGATACTTCACTGAACAGATGGCGCAAAGTTGCAAGCATGCA CAGTGCAAGGTATGAGTTTGCTTGTGCTGTGCTAAATGGATTGGTGTATGTTGTTGGCGG ACATGGATTAGGAGGGAAAAACCTCCCTCACGTAGAGGTATATGATCTGGAGCAAGATAG GTGGACAAAGTTACCAAGTTTAAGGCGTGCACGATGGGGGTGCATTGGGTGTGGTCTTGA AGGAAAGCTCTATGTCATGGCTGGCCGTTCAATCTTTACCATAGGTCACTCTCGGTGTGT GGATGTTTTTCATCCTTTGAAGGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9CAG8 |
Definition |
sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480 OS=Arabidopsis thaliana |
Align length |
104 |
Score (bit) |
96.7 |
E-value |
3.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962120|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0013_A06, 5' (325 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480 OS=Ar... 97 3e-20 sp|Q0WW40|FBK5_ARATH F-box/Kelch-repeat protein At1g16250 OS=Ara... 52 7e-07 sp|Q8N239|KLH34_HUMAN Kelch-like protein 34 OS=Homo sapiens GN=K... 48 2e-05 sp|Q9FZJ3|FBK16_ARATH Putative F-box/Kelch-repeat protein At1g27... 47 4e-05 sp|Q920Q8|NS1BP_MOUSE Influenza virus NS1A-binding protein homol... 46 5e-05 sp|Q6DFU2|NS1BP_XENLA Influenza virus NS1A-binding protein homol... 44 3e-04 sp|Q5RG82|NS1BA_DANRE Influenza virus NS1A-binding protein homol... 44 3e-04 sp|Q9Y6Y0|NS1BP_HUMAN Influenza virus NS1A-binding protein OS=Ho... 42 7e-04 sp|Q5RGB8|KLH26_DANRE Kelch-like protein 26 OS=Danio rerio GN=kl... 41 0.002 sp|Q6NPN5|FK113_ARATH F-box/kelch-repeat protein At5g26960 OS=Ar... 41 0.002 sp|Q9LI89|FBK70_ARATH F-box/Kelch-repeat protein At3g27150 OS=Ar... 40 0.004 sp|Q84M94|FBK15_ARATH F-box/Kelch-repeat protein At1g26930 OS=Ar... 40 0.005 sp|Q53HC5|KLH26_HUMAN Kelch-like protein 26 OS=Homo sapiens GN=K... 39 0.006 sp|Q8CA72|GAN_MOUSE Gigaxonin OS=Mus musculus GN=Gan PE=1 SV=2 39 0.011 sp|Q9M1W7|FBK78_ARATH F-box/Kelch-repeat protein At3g63220 OS=Ar... 39 0.011 sp|Q8L736|FBK31_ARATH F-box/Kelch-repeat protein At2g02870 OS=Ar... 39 0.011 sp|Q6TFL4|KLH24_HUMAN Kelch-like protein 24 OS=Homo sapiens GN=K... 38 0.014 sp|Q7ZVQ8|NS1BB_DANRE Influenza virus NS1A-binding protein homol... 38 0.018 sp|Q56A24|KLH24_RAT Kelch-like protein 24 OS=Rattus norvegicus G... 38 0.018 sp|Q8BRG6|KLH24_MOUSE Kelch-like protein 24 OS=Mus musculus GN=K... 38 0.018 sp|Q6DEL7|KLH15_DANRE Kelch-like protein 15 OS=Danio rerio GN=kl... 38 0.018 sp|P28575|IPP_MOUSE Actin-binding protein IPP OS=Mus musculus GN... 38 0.018 sp|Q9Y573|IPP_HUMAN Actin-binding protein IPP OS=Homo sapiens GN... 37 0.024 sp|Q9H2C0|GAN_HUMAN Gigaxonin OS=Homo sapiens GN=GAN PE=1 SV=1 37 0.024 sp|A4IKB7|CYSH_GEOTN Phosphoadenosine phosphosulfate reductase O... 37 0.024 sp|Q25386|SCRB_LIMPO Beta-scruin OS=Limulus polyphemus PE=2 SV=1 37 0.041 sp|Q8BGY4|KLH26_MOUSE Kelch-like protein 26 OS=Mus musculus GN=K... 37 0.041 sp|Q5ZJU2|KLH15_CHICK Kelch-like protein 15 OS=Gallus gallus GN=... 37 0.041 sp|Q9P2K6|KLDC5_HUMAN Kelch domain-containing protein 5 OS=Homo ... 37 0.041 sp|Q0V7S6|FK125_ARATH F-box/kelch-repeat protein OR23 OS=Arabido... 36 0.053
>sp|Q9CAG8|FBK28_ARATH F-box/Kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1 Length = 376
Score = 96.7 bits (239), Expect = 3e-20 Identities = 48/104 (46%), Positives = 58/104 (55%) Frame = +2
Query: 2 ADVLLYDTSLNRWRKVASMHSARYEFACAXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDR 181 ADV YDT LN W ++A + ARY+FACA EVYD E Sbjct: 157 ADVYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEVYDPETCT 216
Query: 182 WTKLPSLRRARWGCIGCGLEGKLYVMAGRSIFTIGHSRCVDVFH 313 WT + SLRR RWGC GKLYVM GRS FTIG+S+ +DV++ Sbjct: 217 WTFIESLRRPRWGCFASAFNGKLYVMGGRSNFTIGNSKLLDVYN 260
>sp|Q0WW40|FBK5_ARATH F-box/Kelch-repeat protein At1g16250 OS=Arabidopsis thaliana GN=At1g16250 PE=2 SV=1 Length = 383
Score = 52.4 bits (124), Expect = 7e-07 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 1/105 (0%) Frame = +2
Query: 5 DVLLYDTSLNRWRKVASMHSARYEFAC-AXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDR 181 DV+ +D +W+ VASM + R FAC + P EVYD DR Sbjct: 134 DVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAEVYDPVADR 193
Query: 182 WTKLPSLRRARWGCIGCGLEGKLYVMAGRSIFTIGHSRCVDVFHP 316 W +LP++ R + C G G +V++ + F +S +VF+P Sbjct: 194 WEELPAMPRPQMDCSGLSYRGCFHVLSDQVGFAEQNSS--EVFNP 236
>sp|Q8N239|KLH34_HUMAN Kelch-like protein 34 OS=Homo sapiens GN=KLHL34 PE=2 SV=1 Length = 644
Score = 47.8 bits (112), Expect = 2e-05 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Frame = +2
Query: 2 ADVLLYDTSLNRWRKVASMHSARYEFACAXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDR 181 A V YD + W +V +M AR F C VE+YDL +DR Sbjct: 393 AQVHRYDPRFHAWTEVPAMREARAHFWCGAVGERLLAVGGLGAGGEVLASVEMYDLRRDR 452
Query: 182 WTKLPSLRRARWGCIGC-GLEGKLYVMAGRS 271 WT +L RA G G G G +Y+ G++ Sbjct: 453 WTAAGALPRALHGHAGAVGDRGVVYISGGKA 483
>sp|Q9FZJ3|FBK16_ARATH Putative F-box/Kelch-repeat protein At1g27420 OS=Arabidopsis thaliana GN=At1g27420 PE=4 SV=1 Length = 360
Score = 46.6 bits (109), Expect = 4e-05 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%) Frame = +2
Query: 2 ADVLLYDTSLNRWRKVASMHSARYEFACAXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDR 181 ADV +D + N WRK+A M+ RY FA A + EVY+ + ++ Sbjct: 135 ADVYEFDPANNSWRKLAGMNIPRYNFAFAEVNGLLYVIRGYSTDTYSLSNAEVYNPKTNQ 194
Query: 182 WTKLPSLRRARWGCIGCGLEGKLYVMAGRS------IFTIGH-SRCVDVFHP 316 W+ + R W KLY + R T+G+ SR +D++ P Sbjct: 195 WSLMHCPNRPVWRGFAFAFSSKLYAVGRRQWNHIRFQGTLGNGSRFIDIYDP 246
>sp|Q920Q8|NS1BP_MOUSE Influenza virus NS1A-binding protein homolog OS=Mus musculus GN=Ivns1abp PE=1 SV=2 Length = 642
Score = 46.2 bits (108), Expect = 5e-05 Identities = 29/101 (28%), Positives = 39/101 (38%) Frame = +2
Query: 17 YDTSLNRWRKVASMHSARYEFACAXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDRWTKLP 196 YD + W +A M + R F A E+YD D WT +P Sbjct: 388 YDPHTDHWSFLAPMRTPRARFQMAVLMGQLYVVGGSNGHSDDLSCGEMYDPNIDDWTPVP 447
Query: 197 SLRRARWGCIGCGLEGKLYVMAGRSIFTIGHSRCVDVFHPL 319 LR R C L GKLY++ G + + DVF P+ Sbjct: 448 ELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCDVFDPV 488
Score = 32.0 bits (71), Expect = 1.0 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2
Query: 152 VEVYDLEQDRWTKLPSLRRARWGCIGCGLEGKLYVMAGRSIFTIGHS-RCVDVFHPLK 322 VE Y+ E + WT + + AR G L+GKL+V G F H+ CV+++ P + Sbjct: 529 VERYNPENNTWTLIAPMNVARRGAGVAVLDGKLFVGGG---FDGSHAISCVEMYDPTR 583
Score = 29.6 bits (65), Expect = 5.0 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = +2
Query: 152 VEVYDLEQDRWTKLPSLRRARWGCIGCGLEGKLYVMAGRSIFTIGHS---RCVDVFHP 316 VE YD D W+ L +R R L G+LYV+ G + GHS C +++ P Sbjct: 385 VECYDPHTDHWSFLAPMRTPRARFQMAVLMGQLYVVGGSN----GHSDDLSCGEMYDP 438
>sp|Q6DFU2|NS1BP_XENLA Influenza virus NS1A-binding protein homolog OS=Xenopus laevis GN=ivns1abp PE=2 SV=1 Length = 638
Score = 43.5 bits (101), Expect = 3e-04 Identities = 28/101 (27%), Positives = 39/101 (38%) Frame = +2
Query: 17 YDTSLNRWRKVASMHSARYEFACAXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDRWTKLP 196 YD + W +A M + R F A E YD + + WT +P Sbjct: 384 YDLETDIWTFIAPMKTPRARFQMAVLMDHLYVVGGSNGHSDDLSCGEKYDPKSNIWTPVP 443
Query: 197 SLRRARWGCIGCGLEGKLYVMAGRSIFTIGHSRCVDVFHPL 319 LR R C L G LYV+ G + + DVF+P+ Sbjct: 444 ELRSNRCNAGVCALNGNLYVVGGSDPYGQKGLKNCDVFNPI 484
Score = 28.9 bits (63), Expect = 8.5 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2
Query: 152 VEVYDLEQDRWTKLPSLRRARWGCIGCGLEGKLYVMAGRSIFTIGHSR-CVDVFHP 316 VE Y+ + D WT + + AR G +GKL V+ G F H+ CV+ ++P Sbjct: 525 VECYNPQNDTWTLVAPMNVARRGSGVAVYDGKLLVVGG---FDGTHALCCVESYNP 577
>sp|Q5RG82|NS1BA_DANRE Influenza virus NS1A-binding protein homolog A OS=Danio rerio GN=ivns1abpa PE=2 SV=1 Length = 643
Score = 43.5 bits (101), Expect = 3e-04 Identities = 28/101 (27%), Positives = 37/101 (36%) Frame = +2
Query: 17 YDTSLNRWRKVASMHSARYEFACAXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDRWTKLP 196 Y+ N W +A M + R F A E Y+ D WT++P Sbjct: 388 YNIKTNSWTFIAPMRTPRARFQMAVLMGQLYVMGGSNGHSDELSCGETYNPNADEWTQVP 447
Query: 197 SLRRARWGCIGCGLEGKLYVMAGRSIFTIGHSRCVDVFHPL 319 LR R C L KLYV+ G + DVF P+ Sbjct: 448 ELRTNRCNAGVCSLNNKLYVVGGSDPCGQKGLKNCDVFDPI 488
Score = 37.7 bits (86), Expect = 0.018 Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = +2
Query: 152 VEVYDLEQDRWTKLPSLRRARWGCIGCGLEGKLYVMAGRSIFTIGHS-RCVDVFHPLK 322 VE Y+ E + WT + S+ AR G EGKL+V+ G F H+ RCV+++ P++ Sbjct: 529 VERYNPENNTWTLIASMNIARRGAGVAVYEGKLFVVGG---FDGSHALRCVEMYDPVR 583
>sp|Q9Y6Y0|NS1BP_HUMAN Influenza virus NS1A-binding protein OS=Homo sapiens GN=IVNS1ABP PE=1 SV=3 Length = 642
Score = 42.4 bits (98), Expect = 7e-04 Identities = 27/101 (26%), Positives = 38/101 (37%) Frame = +2
Query: 17 YDTSLNRWRKVASMHSARYEFACAXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDRWTKLP 196 Y+ + W +A M + R F A E+YD D W +P Sbjct: 388 YNPHTDHWSFLAPMRTPRARFQMAVLMGQLYVVGGSNGHSDDLSCGEMYDSNIDDWIPVP 447
Query: 197 SLRRARWGCIGCGLEGKLYVMAGRSIFTIGHSRCVDVFHPL 319 LR R C L GKLY++ G + + DVF P+ Sbjct: 448 ELRTNRCNAGVCALNGKLYIVGGSDPYGQKGLKNCDVFDPV 488
Score = 32.0 bits (71), Expect = 1.0 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +2
Query: 152 VEVYDLEQDRWTKLPSLRRARWGCIGCGLEGKLYVMAGRSIFTIGHS-RCVDVFHPLK 322 VE Y+ E + WT + + AR G L GKL+V G F H+ CV+++ P + Sbjct: 529 VERYNPENNTWTLIAPMNVARRGAGVAVLNGKLFVCGG---FDGSHAISCVEMYDPTR 583
>sp|Q5RGB8|KLH26_DANRE Kelch-like protein 26 OS=Danio rerio GN=klhl26 PE=2 SV=1 Length = 605
Score = 40.8 bits (94), Expect = 0.002 Identities = 23/86 (26%), Positives = 35/86 (40%) Frame = +2
Query: 17 YDTSLNRWRKVASMHSARYEFACAXXXXXXXXXXXXXXXXXXXPHVEVYDLEQDRWTKLP 196 YD LN+W ++ M +R +F VE Y +++ WT + Sbjct: 376 YDPHLNQWLRIQPMQESRIQFQL-NVLDGQLYATGGRNRSGSLSSVECYCPKKNEWTNVD 434
Query: 197 SLRRARWGCIGCGLEGKLYVMAGRSI 274 SL+R WG G KLY+ G + Sbjct: 435 SLKRRIWGHAGATCGDKLYISGGYGV 460
>sp|Q6NPN5|FK113_ARATH F-box/kelch-repeat protein At5g26960 OS=Arabidopsis thaliana GN=At5g26960 PE=2 SV=1 Length = 413
Score = 40.8 bits (94), Expect = 0.002 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +2
Query: 152 VEVYDLEQDRWTKLPSLRRARWGCIGCGLEGKLYVMAGRSI 274 VE YD E +RW + R R+GCIG ++G YV+ G I Sbjct: 208 VEEYDPELNRWEVVTQSARKRYGCIGAAVDGVFYVIGGLKI 248
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NX50 |
Definition |
tr|A9NX50|A9NX50_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
105 |
Score (bit) |
115.0 |
E-value |
1.0e-24 |
Report |
|