DK962099 |
Clone id |
TST39A01NGRL0011_P06 |
Library |
TST39 |
Length |
641 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_P06. 5' end sequence. |
Accession |
DK962099 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3534Contig1 |
Sequence |
GTATTTTGGGTGTCAGGAGAACCAGTTTTTGTGCGCGGTCCCGATCTGCATGCAAGCGCG TAGTCTCCATTTCTACATCTCCCCATTGATCCTTTGCGAGCTCTCTCACTGGCTCTTCCT GAAAGCATCGCGTCACTCGATTTAACCCTACTAGCAGCAGGAGGATGGCCACACGCAAGC GGACTTTGCTGAAGGTCATCATTTTGGGGGATAGTGGTGTAGGGAAGACATCTTTGATGA ATCAATATGTCAATAAGAAATTCAGTAATCAATACAAAGCAACCATTGGAGCAGATTTCC TTACAAAGGAGGTACAAGTTGAGGACAGATTAGTTACCATGCAGATTTGGGACACAGCTG GACAGGAGAGGTTCCAAAGTCTTGGTGTAGCCTTTTACAGAGGTGCAGACTGCTGTGTAC TTGTTTATGACGTGAATGTCATGAAATCTTTTGACAGCTTGTCCAACTGGCGGGAGGAAT TTCTTATCCAGGCAAACCCTTCTGATCAAGAAAATTTTCCCTTTATGGTTCTTGGAAATA AAGTAGACATCGATGGTGGGAACAGCCGAGTGGTATCTGAAAAGAAAGCCAAAGCCTGGT GTGCAAGCAAAGGAAACATTCCTTACTTTGAGACATCAGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40787 |
Definition |
sp|Q40787|RAB7_CENCI Ras-related protein Rab7 OS=Cenchrus ciliaris |
Align length |
159 |
Score (bit) |
301.0 |
E-value |
2.0e-81 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SB23 |
Definition |
tr|A9SB23|A9SB23_PHYPA Rab7/RabG-family small GTPase OS=Physcomitrella patens subsp. patens |
Align length |
159 |
Score (bit) |
308.0 |
E-value |
2.0e-82 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK962099|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_P06, 5' (641 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SB23|A9SB23_PHYPA Rab7/RabG-family small GTPase OS=Physcomi... 308 2e-82 tr|A9U087|A9U087_PHYPA Rab7/RabG-family small GTPase OS=Physcomi... 305 2e-81 tr|A9NN24|A9NN24_PICSI Putative uncharacterized protein OS=Picea... 305 2e-81 tr|A7P795|A7P795_VITVI Chromosome chr9 scaffold_7, whole genome ... 302 1e-80 tr|A5C8F3|A5C8F3_VITVI Putative uncharacterized protein (Fragmen... 302 1e-80 tr|A5BFL3|A5BFL3_VITVI Putative uncharacterized protein (Chromos... 301 2e-80 tr|Q75IJ1|Q75IJ1_ORYSJ Os05g0516600 protein OS=Oryza sativa subs... 301 2e-80 tr|Q6UNT4|Q6UNT4_CUCSA Putative GTP-binding protein OS=Cucumis s... 300 4e-80 tr|B8A1G8|B8A1G8_MAIZE Putative uncharacterized protein OS=Zea m... 300 4e-80 tr|B4FI29|B4FI29_MAIZE Putative uncharacterized protein OS=Zea m... 300 4e-80 tr|A9SUA0|A9SUA0_PHYPA Rab7/RabG-family small GTPase OS=Physcomi... 300 4e-80 tr|A9PE06|A9PE06_POPTR Putative uncharacterized protein OS=Popul... 300 4e-80 tr|A9NR13|A9NR13_PICSI Putative uncharacterized protein OS=Picea... 300 4e-80 tr|A9PJI1|A9PJI1_POPJC Putative uncharacterized protein OS=Popul... 300 5e-80 tr|A9P8W4|A9P8W4_POPTR Putative uncharacterized protein OS=Popul... 300 5e-80 tr|A5YVS2|A5YVS2_PROJU Rab7 OS=Prosopsis juliflora GN=Rab7 PE=2 ... 300 5e-80 tr|Q40214|Q40214_LOTJA RAB7D OS=Lotus japonicus GN=rab7D PE=2 SV=1 300 6e-80 tr|A9P8Q6|A9P8Q6_POPTR Putative uncharacterized protein OS=Popul... 300 6e-80 tr|Q38JI9|Q38JI9_SOLTU Putative uncharacterized protein OS=Solan... 299 1e-79 tr|B8AZZ6|B8AZZ6_ORYSI Putative uncharacterized protein OS=Oryza... 299 1e-79 tr|Q40213|Q40213_LOTJA RAB7C OS=Lotus japonicus GN=rab7C PE=2 SV=1 298 1e-79 tr|B7FN46|B7FN46_MEDTR Putative uncharacterized protein OS=Medic... 298 1e-79 tr|B7FGK8|B7FGK8_MEDTR Putative uncharacterized protein OS=Medic... 298 1e-79 tr|Q84V98|Q84V98_ORYSI Small GTP binding protein OS=Oryza sativa... 298 2e-79 tr|Q5MGQ9|Q5MGQ9_PENAM Rab7 OS=Pennisetum americanum PE=2 SV=1 297 4e-79 tr|B6T207|B6T207_MAIZE Ras-related protein Rab7 OS=Zea mays PE=2... 296 7e-79 tr|Q9C820|Q9C820_ARATH GTP-binding protein RAB7D, putative; 6362... 296 9e-79 tr|Q9LS94|Q9LS94_ARATH RAS-related GTP-binding protein (Putative... 295 1e-78 tr|Q5N7Z9|Q5N7Z9_ORYSJ cDNA clone:006-211-E06, full insert seque... 295 1e-78 tr|B8AAZ2|B8AAZ2_ORYSI Putative uncharacterized protein OS=Oryza... 295 1e-78
>tr|A9SB23|A9SB23_PHYPA Rab7/RabG-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabG13 PE=3 SV=1 Length = 206
Score = 308 bits (788), Expect = 2e-82 Identities = 149/159 (93%), Positives = 156/159 (98%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 M+ RKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD+L NWR+EFLIQA+PSDQENFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWRDEFLIQASPSDQENFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 +VLGNKVD+DGGNSRVVSEKKAKAWCA+KG IPYFETSA Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCAAKGGIPYFETSA 159
>tr|A9U087|A9U087_PHYPA Rab7/RabG-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabG11 PE=3 SV=1 Length = 206
Score = 305 bits (780), Expect = 2e-81 Identities = 147/159 (92%), Positives = 156/159 (98%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 M+ RKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD+L NWR+EFLIQA+PSD +NFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLENWRDEFLIQASPSDPDNFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 +VLGNKVD+DGGNSRVVSEKKAKAWCA+KG+IPYFETSA Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCAAKGDIPYFETSA 159
>tr|A9NN24|A9NN24_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 206
Score = 305 bits (780), Expect = 2e-81 Identities = 147/159 (92%), Positives = 155/159 (97%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ Sbjct: 1 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNV+KSFD+L NWR+EFLIQANP+D ENFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVIKSFDNLDNWRQEFLIQANPTDPENFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 +VLGNK D+DGG+SRVVSEKKAK WCA+KGNIPYFETSA Sbjct: 121 VVLGNKTDVDGGHSRVVSEKKAKMWCAAKGNIPYFETSA 159
>tr|A7P795|A7P795_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034372001 PE=3 SV=1 Length = 207
Score = 302 bits (773), Expect = 1e-80 Identities = 145/159 (91%), Positives = 155/159 (97%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 MA+R+R LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQ EDRL T+Q Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD+L+NWREEFLIQA+PSD ENFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 +VLGNK+D+DGGNSRVVSEKKAKAWCASKGNIPYFETSA Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSA 159
>tr|A5C8F3|A5C8F3_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_010510 PE=3 SV=1 Length = 207
Score = 302 bits (773), Expect = 1e-80 Identities = 145/159 (91%), Positives = 155/159 (97%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 MA+R+R LLKVIILGDSGVGKTSLMNQYVN+KFSNQYKATIGADFLTKEVQ EDRL T+Q Sbjct: 1 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD+L+NWREEFLIQA+PSD ENFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 +VLGNK+D+DGGNSRVVSEKKAKAWCASKGNIPYFETSA Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSA 159
>tr|A5BFL3|A5BFL3_VITVI Putative uncharacterized protein (Chromosome chr3 scaffold_8, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00036401001 PE=3 SV=1 Length = 206
Score = 301 bits (772), Expect = 2e-80 Identities = 145/159 (91%), Positives = 155/159 (97%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFD+L+NWREEFLIQA+PSD ENFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 +VLGNKVD+DGGNSRVVS+KKA+AWCASKGNIPYFETSA Sbjct: 121 VVLGNKVDVDGGNSRVVSDKKARAWCASKGNIPYFETSA 159
>tr|Q75IJ1|Q75IJ1_ORYSJ Os05g0516600 protein OS=Oryza sativa subsp. japonica GN=B1130G10.11 PE=2 SV=1 Length = 206
Score = 301 bits (771), Expect = 2e-80 Identities = 145/159 (91%), Positives = 155/159 (97%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 MA+R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD+L+NWREEFLIQA+PSD +NFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 ++LGNKVD+DGGNSRVVSEKKAKAWCASKGNIPYFETSA Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSA 159
>tr|Q6UNT4|Q6UNT4_CUCSA Putative GTP-binding protein OS=Cucumis sativus GN=Rab7b PE=2 SV=1 Length = 206
Score = 300 bits (769), Expect = 4e-80 Identities = 145/159 (91%), Positives = 154/159 (96%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 M +R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q Sbjct: 1 MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD+L+NWREEFLIQA+PSD ENFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 +VLGNKVD+DGGNSRVVSEKKA+AWCASKGNIPYFETSA Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSA 159
>tr|B8A1G8|B8A1G8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 206
Score = 300 bits (769), Expect = 4e-80 Identities = 145/159 (91%), Positives = 154/159 (96%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 MA+R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD+L NWREEFLIQA+PSD +NFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 ++LGNKVD+DGGNSRVVSEKKAKAWCASKGNIPYFETSA Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSA 159
>tr|B4FI29|B4FI29_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 214
Score = 300 bits (769), Expect = 4e-80 Identities = 145/159 (91%), Positives = 154/159 (96%) Frame = +3
Query: 165 MATRKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 344 MA+R+RTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQ EDRL T+Q Sbjct: 1 MASRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 345 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLSNWREEFLIQANPSDQENFPF 524 IWDTAGQERFQSLGVAFYRGADCCVLVYDVN MKSFD+L NWREEFLIQA+PSD +NFPF Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPF 120
Query: 525 MVLGNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSA 641 ++LGNKVD+DGGNSRVVSEKKAKAWCASKGNIPYFETSA Sbjct: 121 VLLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSA 159
|