DK961879 |
Clone id |
TST39A01NGRL0011_F21 |
Library |
TST39 |
Length |
705 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_F21. 5' end sequence. |
Accession |
DK961879 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3559Contig1 |
Sequence |
AGATTTTCGGTCGGTAAAATAGGTAAATTCATTTCTAAGCTGCGCAAGCAAACAGCAGAT CTTGTTGGTGCGAGCTTCTGCGGATCAAGGGTCCCCCGTATCTCTTTCAATTTTCAGGTA GTCGACATAGCCGTCTTCTTCAGAAATACACAGCCACCGTCGGCAGATATTCAGTAGGTT TAGTGGATCTGCTGTCCTTGGATTGCTTTCCGAAGATTCATAGATTGGCTGAAGTACCCT CTGGACCTCGCTGCACGGCAGGGTCCCTCATTGCCCAATATGGCACAGGGTTCTCGTGAC AATGATGACAAAGTTGCTCACTTCCAGGCGGTCACAGGCTTGCAAGACTCTTCATTGTGT GCGCAGATCTTACAAGCTTATAATTGGGACCTCGACCTAGCTGTTGGCTCCATGGCTGAC GGAGTGGTTCCCGATGATGCAGCATTCACGTCATCTGATAACATTGGAGGCCATACCCTT GATGCCAGTGCAGGCCCGTCCAGTCCTTATGATGATGGTGTGAATCGTGTCAACATGCCT ACCGAAGAAGCTCGCCTCGTGAATGCTAACAGAAACCATGCTGTCGTGCCTCATCAAGCA GGGCCTGGTTTGATATGGAGGGTAGCCACTCTCCCCTTTTCAGTTATACGAGGAAGCTAT AACGTCATGTATGGTGCTGTTGGGCCTTGGTATGTGGATTGCTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q924K2 |
Definition |
sp|Q924K2|FAF1_RAT FAS-associated factor 1 OS=Rattus norvegicus |
Align length |
71 |
Score (bit) |
39.3 |
E-value |
0.021 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9M0N1 |
Definition |
tr|Q9M0N1|Q9M0N1_ARATH Putative uncharacterized protein AT4g10790 OS=Arabidopsis thaliana |
Align length |
129 |
Score (bit) |
80.5 |
E-value |
1.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961879|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_F21, 5' (705 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9M0N1|Q9M0N1_ARATH Putative uncharacterized protein AT4g1079... 80 1e-13 tr|O82483|O82483_ARATH T12H20.9 protein OS=Arabidopsis thaliana ... 80 1e-13 tr|A9RJT6|A9RJT6_PHYPA Predicted protein OS=Physcomitrella paten... 80 1e-13 tr|A7QJ86|A7QJ86_VITVI Chromosome chr2 scaffold_105, whole genom... 79 3e-13 tr|Q5DJU1|Q5DJU1_CAPAN Fas-associated factor 1-like protein OS=C... 76 2e-12 tr|B6TD00|B6TD00_MAIZE Fas-associated factor 1-like protein OS=Z... 75 5e-12 tr|B4FMI4|B4FMI4_MAIZE Putative uncharacterized protein OS=Zea m... 74 7e-12 tr|Q9FWC4|Q9FWC4_ORYSJ cDNA clone:J023077I21, full insert sequen... 73 2e-11 tr|A9TYB0|A9TYB0_PHYPA Predicted protein (Fragment) OS=Physcomit... 73 2e-11 tr|A2Z9E8|A2Z9E8_ORYSI Putative uncharacterized protein OS=Oryza... 72 4e-11 tr|A9U4R0|A9U4R0_PHYPA Predicted protein OS=Physcomitrella paten... 70 1e-10 tr|A3C6J4|A3C6J4_ORYSJ Putative uncharacterized protein OS=Oryza... 69 4e-10 tr|Q5Z8Z8|Q5Z8Z8_ORYSJ Putative uncharacterized protein P0656E03... 55 3e-06 tr|A3BCT1|A3BCT1_ORYSJ Putative uncharacterized protein OS=Oryza... 55 3e-06 tr|B8B3S6|B8B3S6_ORYSI Putative uncharacterized protein OS=Oryza... 54 8e-06 tr|B0XAP2|B0XAP2_CULQU UBX domain-containing protein 8 OS=Culex ... 47 0.001 tr|Q17DA0|Q17DA0_AEDAE Fas-associated protein OS=Aedes aegypti G... 44 0.008 tr|B4KGA1|B4KGA1_DROMO GI16862 OS=Drosophila mojavensis GN=GI168... 40 0.11 tr|Q7Q3P6|Q7Q3P6_ANOGA AGAP007977-PA OS=Anopheles gambiae GN=AGA... 40 0.15 tr|B4JAN7|B4JAN7_DROGR GH11459 OS=Drosophila grimshawi GN=GH1145... 40 0.19 tr|Q29RM7|Q29RM7_BOVIN Fas (TNFRSF6) associated factor 1 OS=Bos ... 39 0.33 tr|B4LTS3|B4LTS3_DROVI GJ17201 OS=Drosophila virilis GN=GJ17201 ... 39 0.33 tr|A9ULP0|A9ULP0_XENTR Expressed in T-cells and eosinophils in a... 39 0.43 tr|B7FQE3|B7FQE3_PHATR Predicted protein OS=Phaeodactylum tricor... 39 0.43 tr|Q6P1F8|Q6P1F8_MOUSE Fas-associated factor 1 OS=Mus musculus G... 38 0.73 tr|Q29LE0|Q29LE0_DROPS GA10282 OS=Drosophila pseudoobscura pseud... 38 0.73 tr|B4GQ59|B4GQ59_DROPE GL14719 OS=Drosophila persimilis GN=GL147... 38 0.73 tr|Q9VJ58|Q9VJ58_DROME Fas-associated factor OS=Drosophila melan... 37 0.96 tr|O77047|O77047_DROME Fas-associated factor OS=Drosophila melan... 37 0.96 tr|B7QCT9|B7QCT9_IXOSC UBX domain-containing protein, putative O... 37 0.96
>tr|Q9M0N1|Q9M0N1_ARATH Putative uncharacterized protein AT4g10790 OS=Arabidopsis thaliana GN=At4g10790 PE=4 SV=1 Length = 480
Score = 80.5 bits (197), Expect = 1e-13 Identities = 46/129 (35%), Positives = 72/129 (55%) Frame = +1
Query: 298 DNDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHT 477 D DK+ +FQA+TGL+D+ LC +ILQA+ WDL+LA+ S D A +S+ + GG+ Sbjct: 3 DTVDKLGYFQAITGLEDADLCTEILQAHGWDLELAISSFTSS---DQDASSSAVDGGGNN 59
Query: 478 LDASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVIRGS 657 D ++ D R + ++ LV + GPG+ WR+ TLP S++ GS Sbjct: 60 RDHDHNNATVTPDYPPRGIV--DDTELVMRDDGGG----NRGPGVAWRIITLPISIVSGS 113
Query: 658 YNVMYGAVG 684 ++ GA+G Sbjct: 114 LGLVSGAIG 122
>tr|O82483|O82483_ARATH T12H20.9 protein OS=Arabidopsis thaliana GN=T12H20.9 PE=4 SV=1 Length = 466
Score = 80.5 bits (197), Expect = 1e-13 Identities = 46/129 (35%), Positives = 72/129 (55%) Frame = +1
Query: 298 DNDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHT 477 D DK+ +FQA+TGL+D+ LC +ILQA+ WDL+LA+ S D A +S+ + GG+ Sbjct: 3 DTVDKLGYFQAITGLEDADLCTEILQAHGWDLELAISSFTSS---DQDASSSAVDGGGNN 59
Query: 478 LDASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVIRGS 657 D ++ D R + ++ LV + GPG+ WR+ TLP S++ GS Sbjct: 60 RDHDHNNATVTPDYPPRGIV--DDTELVMRDDGGG----NRGPGVAWRIITLPISIVSGS 113
Query: 658 YNVMYGAVG 684 ++ GA+G Sbjct: 114 LGLVSGAIG 122
>tr|A9RJT6|A9RJT6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115360 PE=4 SV=1 Length = 475
Score = 80.1 bits (196), Expect = 1e-13 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%) Frame = +1
Query: 301 NDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMAD---GVVPDDAAFTSSDNIGG 471 + K+A+FQ +TG++DSSL QIL AY WDLD A+ +M D V+P+ ++S + Sbjct: 2 DQQKLAYFQEITGVKDSSLSHQILDAYGWDLDSAIQAMVDKTTNVIPEYEEMSTSLSPPS 61
Query: 472 HTLDASAGPSSPYDDGVNRVNMPTEEARLV--------NANRNHAVVPHQAGPGLIWRVA 627 H +P G+ + R + + A V G +WRV Sbjct: 62 H---------NPSPGGIQVTEQSFVDDRSLFERIGDGEHFQGPSAGVESSDGTTFVWRVV 112
Query: 628 TLPFSVIRGSYNVMYGAVG 684 TLPF+++RGSYN++YGA G Sbjct: 113 TLPFTILRGSYNIIYGAFG 131
>tr|A7QJ86|A7QJ86_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000545001 PE=4 SV=1 Length = 292
Score = 79.0 bits (193), Expect = 3e-13 Identities = 50/129 (38%), Positives = 73/129 (56%) Frame = +1
Query: 298 DNDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHT 477 D DK+A+FQA+TGL+D LC++IL A+ WDL+LA+ S T+SD Sbjct: 3 DVADKLAYFQAITGLEDPDLCSEILAAHGWDLELAISSF---------TVTNSDR----- 48
Query: 478 LDASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVIRGS 657 ++SA ++ + V R +EE RL+ + V A PGL W++ TLP SVI GS Sbjct: 49 PESSATVAADVAE-VGRSEQSSEELRLLQISETMGGV--VAPPGLAWKLITLPISVISGS 105
Query: 658 YNVMYGAVG 684 ++ GA+G Sbjct: 106 LGLISGAIG 114
>tr|Q5DJU1|Q5DJU1_CAPAN Fas-associated factor 1-like protein OS=Capsicum annuum PE=2 SV=1 Length = 468
Score = 75.9 bits (185), Expect = 2e-12 Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 5/136 (3%) Frame = +1
Query: 298 DNDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVG---SMADGVVPDDAAFTSSDNIG 468 D DK+A+FQA+TGL+D+ LC +IL A+ WDL+LA+ S D PD+ AF Sbjct: 3 DVADKIAYFQAITGLEDADLCTEILAAHGWDLELAISVFTSQNDHSAPDNPAFEPPT--- 59
Query: 469 GHTLDASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVI 648 + + P E L+ A N PG+ W++ TLPFS+I Sbjct: 60 -----------------TSNLTPPVETTGLI-AGGNGGAAAATGPPGIAWKIITLPFSII 101
Query: 649 RG--SYNVMYGAVGPW 690 G N G VG W Sbjct: 102 SGGLGLNSRCGRVGVW 117
>tr|B6TD00|B6TD00_MAIZE Fas-associated factor 1-like protein OS=Zea mays PE=2 SV=1 Length = 466
Score = 74.7 bits (182), Expect = 5e-12 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 2/131 (1%) Frame = +1
Query: 304 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHTLD 483 DDK+++FQAVTG+ D+ LC +IL A+NWDL LAV S+ A SS + T Sbjct: 6 DDKISYFQAVTGISDTDLCTEILAAHNWDLQLAVSSI--------TANPSSPSAPVSTSS 57
Query: 484 ASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVIRGSYN 663 PS+P D P P Q PG+ W++ TLPF V+ G + Sbjct: 58 RDPAPSAPLADAEFVAPPPP------------IPPPPQQQPGIAWKLVTLPFYVVSGGAS 105
Query: 664 VMYGA--VGPW 690 ++ G+ +G W Sbjct: 106 LVAGSFRLGAW 116
>tr|B4FMI4|B4FMI4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 469
Score = 74.3 bits (181), Expect = 7e-12 Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 2/131 (1%) Frame = +1
Query: 304 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHTLD 483 DDKV++FQAVTG+ ++ LC +IL A+NWDL LAV ++ A SS + T Sbjct: 6 DDKVSYFQAVTGISNTDLCTEILAAHNWDLQLAVSTI--------TANPSSPSASASTSS 57
Query: 484 ASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVIRGSYN 663 PS+P V P +P Q PG+ W++ TLPF V+ G Sbjct: 58 RDPAPSAPLAVDAEYVAPPPPLP---------LPLPPQQQPGIAWKLVTLPFHVVSGGVG 108
Query: 664 VMYGA--VGPW 690 ++ G +G W Sbjct: 109 LVAGTFRLGAW 119
>tr|Q9FWC4|Q9FWC4_ORYSJ cDNA clone:J023077I21, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0018B10.16 PE=2 SV=1 Length = 466
Score = 73.2 bits (178), Expect = 2e-11 Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 7/136 (5%) Frame = +1
Query: 304 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHTLD 483 DDKV++FQAVTG+ D LC +IL A+NWDL LAV S+ Sbjct: 6 DDKVSYFQAVTGISDHDLCTEILAAHNWDLQLAVSSI----------------------- 42
Query: 484 ASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVP-----HQAGPGLIWRVATLPFSVI 648 +A PSSP D +P R + H P Q PG+ W++ TLPF V+ Sbjct: 43 -TANPSSP--DPAPSAPLPPLAPREADLVAPHLPPPPQQQQQQQQPGIAWKLVTLPFYVV 99
Query: 649 RGSYNVMYGAV--GPW 690 G ++ G++ G W Sbjct: 100 SGGVGLIAGSIRLGAW 115
>tr|A9TYB0|A9TYB0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_2562 PE=4 SV=1 Length = 462
Score = 73.2 bits (178), Expect = 2e-11 Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 6/132 (4%) Frame = +1
Query: 307 DKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHTLDA 486 +K+ +FQ VTG+ D L QIL A+ WDL+ G+VP +S N H Sbjct: 1 EKLQYFQDVTGVDDPLLAEQILDAHQWDLER-------GLVP------TSVNPAHH---- 43
Query: 487 SAGPSSPYDDGVNRVNMPTEEAR---LVNANRNHAVVP---HQAGPGLIWRVATLPFSVI 648 GPS + +R N + H +P ++ GP ++WRV LPFS+I Sbjct: 44 --GPSEVFGSQASRSNYDRYQGSPPSFEGPGEYHGTLPIVRNRPGPHVVWRVVALPFSII 101
Query: 649 RGSYNVMYGAVG 684 RGS+N++YGAVG Sbjct: 102 RGSFNLVYGAVG 113
>tr|A2Z9E8|A2Z9E8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34349 PE=4 SV=1 Length = 465
Score = 72.0 bits (175), Expect = 4e-11 Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 3/132 (2%) Frame = +1
Query: 304 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSM-ADGVVPDDAAFTSSDNIGGHTL 480 DDKV++FQAVTG+ D LC +IL A+NWDL LAV S+ A+ PD A Sbjct: 6 DDKVSYFQAVTGISDHDLCTEILAAHNWDLQLAVSSITANPSSPDPAP------------ 53
Query: 481 DASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVIRGSY 660 A P +P + + ++P + Q PG+ W++ TLPF V+ G Sbjct: 54 SAPPPPLAPREADLVAPHLPPPPQQ-----------QQQQQPGIAWKLVTLPFYVVSGGV 102
Query: 661 NVMYGAV--GPW 690 ++ G++ G W Sbjct: 103 GLIAGSIRLGAW 114
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