DK961839 |
Clone id |
TST39A01NGRL0011_E04 |
Library |
TST39 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0011_E04. 5' end sequence. |
Accession |
DK961839 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2471Contig1 |
Sequence |
ACAACTGCAGGATTTGCTGTTGATCGCATCAATGCAAGGCTCCACAACCCATCAGCACAA GTGCTCTTCTTAGAGGCCACACACCCTGGTGGGGAACCTGTGGAGTTCGGCCCTAATGCA GAACTCACCATCCTTGAGGATGGCTGGACTCTTCGTGGAGTATCACACCAAATTGCAGGT GGTTTAAGGTCTGAAACGCTTGTAGCTGAAAATTTGGATCCTGGTCTTTTCTATCCTGGT GGCAAGCTACCTAGAGGGCGCAATGCAGAGTTCACGTTTGAGTATATGGGCAAAGTTTTT CTTTGCTTTTTATTTATGCTGGTTCTAGGTTTTATGCTGAAGAGCTTTTTAGAACAGCTT CCTATGCTTTTAAAATCAGAGAAGCATGTACATACTGACAATCATGAATTGTGATTATTG TTAATGGTAAGTACAAGGCACATTGCCATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8IWY9 |
Definition |
sp|Q8IWY9|CDAN1_HUMAN Codanin-1 OS=Homo sapiens |
Align length |
65 |
Score (bit) |
35.4 |
E-value |
0.11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RV62 |
Definition |
tr|A9RV62|A9RV62_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
126 |
Score (bit) |
79.0 |
E-value |
1.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK961839|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0011_E04, 5' (451 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RV62|A9RV62_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13 tr|A7PZY3|A7PZY3_VITVI Chromosome chr8 scaffold_41, whole genome... 70 7e-11 tr|A9SRS1|A9SRS1_PHYPA Predicted protein OS=Physcomitrella paten... 69 2e-10 tr|Q8LA59|Q8LA59_ARATH Putative uncharacterized protein OS=Arabi... 60 4e-08 tr|Q8W304|Q8W304_ORYSA Putative uncharacterized protein OSJNBa00... 60 5e-08 tr|Q10CV8|Q10CV8_ORYSJ Os03g0748600 protein OS=Oryza sativa subs... 60 5e-08 tr|B8AJW0|B8AJW0_ORYSI Putative uncharacterized protein OS=Oryza... 60 5e-08 tr|Q9FGI8|Q9FGI8_ARATH Genomic DNA, chromosome 5, P1 clone:MPA22... 59 2e-07 tr|Q8RWG7|Q8RWG7_ARATH Putative uncharacterized protein At5g3748... 59 2e-07 tr|B6TLM6|B6TLM6_MAIZE Putative uncharacterized protein OS=Zea m... 57 4e-07 tr|A9RJ54|A9RJ54_PHYPA Predicted protein OS=Physcomitrella paten... 56 1e-06 tr|B0W648|B0W648_CULQU Putative uncharacterized protein OS=Culex... 39 0.100 tr|B0WVG0|B0WVG0_CULQU B-cell CLL/lymphoma 11A OS=Culex quinquef... 34 3.2 tr|B7PWI0|B7PWI0_IXOSC Putative uncharacterized protein (Fragmen... 34 4.2 tr|A5BS97|A5BS97_VITVI Putative uncharacterized protein OS=Vitis... 33 5.5 tr|Q55HN1|Q55HN1_CRYNE Putative uncharacterized protein OS=Crypt... 33 5.5 tr|A6KZ07|A6KZ07_BACV8 Phosphoenolpyruvate carboxykinase OS=Bact... 33 7.1 tr|B7B700|B7B700_9PORP Putative uncharacterized protein OS=Parab... 33 7.1 tr|B7AL11|B7AL11_9BACE Putative uncharacterized protein OS=Bacte... 33 7.1 tr|B6VX00|B6VX00_9BACE Putative uncharacterized protein OS=Bacte... 33 7.1 tr|A7AHE8|A7AHE8_9PORP Putative uncharacterized protein OS=Parab... 33 7.1 tr|B0XAA3|B0XAA3_CULQU Tartan OS=Culex quinquefasciatus GN=CpipJ... 33 7.1 tr|A1YIC1|A1YIC1_BLAEM DNA-directed RNA polymerase (Fragment) OS... 33 7.1 tr|B8D416|B8D416_9CREN Phosphoribosylformylglycinamidine synthas... 33 7.1 tr|A4V4B0|A4V4B0_DROME Discs large 1, isoform E OS=Drosophila me... 33 7.2 tr|A7V8W4|A7V8W4_BACUN Putative uncharacterized protein OS=Bacte... 33 9.3 tr|B6KMX4|B6KMX4_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.4 tr|A4I0C8|A4I0C8_LEIIN Putative uncharacterized protein OS=Leish... 33 9.4
>tr|A9RV62|A9RV62_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_119798 PE=4 SV=1 Length = 144
Score = 79.0 bits (193), Expect = 1e-13 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 5/126 (3%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQIAG 180 T A FA++R N +L +PS V+ + A G +P+EFGP+ EL +D WTL+ Sbjct: 22 TKAAFAIERFNCQLKDPSLPVVCIVACKDGEDPIEFGPDVELVSYDDTWTLK-------- 73
Query: 181 GLRSETLVA-----ENLDPGLFYPGGKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKS 345 LR T VA N + YP GK+P G + + T +Y+GKV + F+F+ L Sbjct: 74 TLREGTGVAFYPLQRNWED--LYPEGKIPEGGSQDCTPQYVGKVLVMFIFVFAFAGGLIY 131
Query: 346 FLEQLP 363 LEQLP Sbjct: 132 MLEQLP 137
>tr|A7PZY3|A7PZY3_VITVI Chromosome chr8 scaffold_41, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027059001 PE=4 SV=1 Length = 171
Score = 69.7 bits (169), Expect = 7e-11 Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSH-QIA 177 T AGFA+ IN +L L +EA G EPV FGPNA L DGW L V+ + A Sbjct: 41 TEAGFAIYLINKKLDIGLPLALHIEAVKEGEEPVSFGPNAVLVDYGDGWKLETVTDVEFA 100
Query: 178 GGLRSETLVAENLDPGLFYPGGKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKSFLEQ 357 G+ E V G +P + +F Y+GK+F+ +F+ LG + LE Sbjct: 101 VGVGKEKRVQPTKSLGGSHPSESAVSSQPV-ISFVYIGKIFIAIIFIFALGAVFTLALEN 159
Query: 358 LPMLL 372 LP L+ Sbjct: 160 LPRLI 164
>tr|A9SRS1|A9SRS1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233895 PE=4 SV=1 Length = 214
Score = 68.6 bits (166), Expect = 2e-10 Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 45/169 (26%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQI-- 174 T AGFAVDR N N S V+ ++A G EP+E+GP+ EL + ++ WT + VS + Sbjct: 37 TRAGFAVDRFNKLNPNDSKPVVCIQACKDGEEPIEYGPDVELHLHDEAWTFQCVSEHVFP 96
Query: 175 --AGGLRSETLVAENLDPGL---------------------------------------- 228 +++ T V + ++ L Sbjct: 97 LPNNNVKARTEVTQAVEKELYTYSQTPWATNEGITKTLLDKTISADGEVLHGTTVVQGWE 156
Query: 229 -FYPGGKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKSFLEQLPMLL 372 FYPGG LP G E T EY KV L F+ + L FLE++P ++ Sbjct: 157 EFYPGGVLPEGGKQECTPEYFIKVLLMFVCIFGFAGALGYFLERMPEMV 205
>tr|Q8LA59|Q8LA59_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 156
Score = 60.5 bits (145), Expect = 4e-08 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 1/125 (0%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQIAG 180 T A FAV IN +L + +V+++EA G EP+ FG NA L GW L+ V Sbjct: 26 TKAEFAVSVINRKLGSLKPRVIYIEAAKEGEEPISFGDNASLLNYGLGWKLKTVVDADLP 85
Query: 181 GLRSETLVAENLDPGLFYPG-GKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKSFLEQ 357 G +E + +F G K E + +Y+G++F F+ M +LG + LE Sbjct: 86 G--TEKNNRQQRFSSVFSTGFAKDSAPEIGEQSLKYIGRIFFAFVLMFILGGLFTVALEN 143
Query: 358 LPMLL 372 LP L+ Sbjct: 144 LPRLI 148
>tr|Q8W304|Q8W304_ORYSA Putative uncharacterized protein OSJNBa0069E14.10 OS=Oryza sativa GN=OSJNBa0069E14.10 PE=4 SV=1 Length = 171
Score = 60.1 bits (144), Expect = 5e-08 Identities = 41/121 (33%), Positives = 57/121 (47%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQIAG 180 TTA +A+ +N +L + L +EA G EPV FGP A L DGW L+ ++ Q A Sbjct: 43 TTARYALHAVNRKLAPGAPAALHVEAVKDGEEPVSFGPAAPLADYGDGWKLQTITEQDAP 102
Query: 181 GLRSETLVAENLDPGLFYPGGKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKSFLEQL 360 G D K P R+ E Y+ K+ L F+F+ +LG + LE L Sbjct: 103 GYYQTPASDTRRDD--TKQSAKNP--RDQETMAAYITKIVLAFVFIFLLGGLFTYLLETL 158
Query: 361 P 363 P Sbjct: 159 P 159
>tr|Q10CV8|Q10CV8_ORYSJ Os03g0748600 protein OS=Oryza sativa subsp. japonica GN=Os03g0748600 PE=2 SV=1 Length = 171
Score = 60.1 bits (144), Expect = 5e-08 Identities = 41/121 (33%), Positives = 57/121 (47%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQIAG 180 TTA +A+ +N +L + L +EA G EPV FGP A L DGW L+ ++ Q A Sbjct: 43 TTARYALHAVNRKLAPGAPAALHVEAVKDGEEPVSFGPAAPLADYGDGWKLQTITEQDAP 102
Query: 181 GLRSETLVAENLDPGLFYPGGKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKSFLEQL 360 G D K P R+ E Y+ K+ L F+F+ +LG + LE L Sbjct: 103 GYYQTPASDTRRDD--TKQSAKNP--RDQETMAAYITKIVLAFVFIFLLGGLFTYLLETL 158
Query: 361 P 363 P Sbjct: 159 P 159
>tr|B8AJW0|B8AJW0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13509 PE=4 SV=1 Length = 171
Score = 60.1 bits (144), Expect = 5e-08 Identities = 41/121 (33%), Positives = 57/121 (47%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQIAG 180 TTA +A+ +N +L + L +EA G EPV FGP A L DGW L+ ++ Q A Sbjct: 43 TTARYALHAVNRKLAPGAPAALHVEAVKDGEEPVSFGPAAPLADYGDGWKLQTITEQDAP 102
Query: 181 GLRSETLVAENLDPGLFYPGGKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKSFLEQL 360 G D K P R+ E Y+ K+ L F+F+ +LG + LE L Sbjct: 103 GYYQTPASDTRRDD--TKQSAKNP--RDQETMAAYITKIVLAFVFIFLLGGLFTYLLETL 158
Query: 361 P 363 P Sbjct: 159 P 159
>tr|Q9FGI8|Q9FGI8_ARATH Genomic DNA, chromosome 5, P1 clone:MPA22 OS=Arabidopsis thaliana PE=4 SV=1 Length = 203
Score = 58.5 bits (140), Expect = 2e-07 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 1/125 (0%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQIAG 180 T A FAV IN +L + +V+++EA G EP+ FG NA L GW L+ V Sbjct: 73 TKAEFAVSVINRKLGSLKPRVIYIEAAKEGEEPISFGDNASLLNYGLGWKLKTVVDADLP 132
Query: 181 GLRSETLVAENLDPGLFYPG-GKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKSFLEQ 357 G +E + +F G E + +Y+G++F F+ M +LG + LE Sbjct: 133 G--TEKNNRQQRFSSVFSTGFANDSTPEIGEQSLKYIGRIFFAFVLMFILGGLFTVALEN 190
Query: 358 LPMLL 372 LP L+ Sbjct: 191 LPRLI 195
>tr|Q8RWG7|Q8RWG7_ARATH Putative uncharacterized protein At5g37480 OS=Arabidopsis thaliana GN=At5g37480 PE=2 SV=1 Length = 156
Score = 58.5 bits (140), Expect = 2e-07 Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 1/125 (0%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQIAG 180 T A FAV IN +L + +V+++EA G EP+ FG NA L GW L+ V Sbjct: 26 TKAEFAVSVINRKLGSLKPRVIYIEAAKEGEEPISFGDNASLLNYGLGWKLKTVVDADLP 85
Query: 181 GLRSETLVAENLDPGLFYPG-GKLPRGRNAEFTFEYMGKVFLCFLFMLVLGFMLKSFLEQ 357 G +E + +F G E + +Y+G++F F+ M +LG + LE Sbjct: 86 G--TEKNNRQQRFSSVFSTGFANDSTPEIGEQSLKYIGRIFFAFVLMFILGGLFTVALEN 143
Query: 358 LPMLL 372 LP L+ Sbjct: 144 LPRLI 148
>tr|B6TLM6|B6TLM6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 189
Score = 57.4 bits (137), Expect = 4e-07 Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 6/132 (4%) Frame = +1
Query: 1 TTAGFAVDRINARLHNPSAQVLFLEATHPGGEPVEFGPNAELTILEDGWTLRGVSHQIAG 180 TTA +A+ IN +L + L +EA G EPV FGP+A L GW L+ V+ A Sbjct: 47 TTARYALHAINRKLGPGAPPALHVEAVRDGEEPVSFGPSAALADYGRGWRLQTVTAHDAP 106
Query: 181 GLRSETLVAENLDPGLFYPGGKLPRGRNA------EFTFEYMGKVFLCFLFMLVLGFMLK 342 G+ A + D G + P +A T Y+ K+ L F F+ +LG L Sbjct: 107 GIHH----APHADT---KQGDRQPSKEDAVVTETVRATCIYVAKIVLAFAFLFLLGGSLT 159
Query: 343 SFLEQLPMLLKS 378 LE +P +L++ Sbjct: 160 YLLEVIPDMLQT 171
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